Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G178300 Phaseolus vulgaris HOM05D005660 ORTHO05D006954 2.1e-115 419.1 215 100.0
VMungo1215G2351 Vigna mungo HOM05D005660 ORTHO05D006954 1.4e-87 326.6 283 66.4
Glyma.17G122400 Glycine max HOM05D005660 ORTHO05D006954 7.7e-86 320.9 215 78.6
Glyma.05G014100 Glycine max HOM05D005660 ORTHO05D006954 2.2e-85 319.3 215 78.6
Lalb_Chr07g0178541 Lupinus albus HOM05D005660 ORTHO05D006954 1.2e-75 287.0 218 71.1
Lj4g0015648 Lotus japonicus HOM05D005660 ORTHO05D006954 2.3e-74 282.7 216 70.4
arahy.Tifrunner.gnm1.ann1.IPQJ9D Arachis hypogaea HOM05D005660 ORTHO05D006954 3.7e-72 275.4 220 66.8
arahy.Tifrunner.gnm1.ann1.YK8N2P Arachis hypogaea HOM05D005660 ORTHO05D006954 8.3e-72 274.2 220 66.8
Duzib068G0469 Durio zibethinus HOM05D005660 ORTHO05D006954 2.7e-62 242.7 219 60.7
QL10p023157 Quercus lobata HOM05D005660 ORTHO05D006954 1.0e-61 240.7 219 62.1
VMungo1309G1625 Vigna mungo HOM05D005660 ORTHO05D006954 1.0e-61 240.7 217 61.8
Glyma.06G209600 Glycine max HOM05D005660 ORTHO05D006954 5.0e-61 238.4 218 61.9
Cc04_g07620 Coffea canephora HOM05D005660 ORTHO05D006954 1.5e-60 236.9 214 60.3
RcHm_v2.0_Chr7g0184421 Rosa chinensis HOM05D005660 ORTHO05D006954 3.3e-60 235.7 223 57.8
Lj1g0000047 Lotus japonicus HOM05D005660 ORTHO05D006954 4.3e-60 235.3 216 60.6
FvH4_5g12810 Fragaria vesca HOM05D005660 ORTHO05D006954 3.6e-59 232.3 223 59.2
FAN18G2100 Fragaria x ananassa HOM05D005660 ORTHO05D006954 3.6e-59 232.3 223 59.2
CiPaw.16G083200 Carya illinoinensis HOM05D005660 ORTHO05D006954 4.7e-59 231.9 225 58.7
Gorai.008G285000 Gossypium raimondii HOM05D005660 ORTHO05D006954 8.0e-59 231.1 240 55.8
FAN08G1036 Fragaria x ananassa HOM05D005660 ORTHO05D006954 1.0e-58 230.7 223 58.7
Atru.chr9.733 Acer truncatum HOM05D005660 ORTHO05D006954 1.4e-58 230.3 216 59.7
Lj5C141T17 Lonicera japonica HOM05D005660 ORTHO05D006954 1.4e-58 230.3 214 56.1
Glyma.04G145600 Glycine max HOM05D005660 ORTHO05D006954 1.8e-58 229.9 217 60.4
arahy.Tifrunner.gnm1.ann1.18T8HP Arachis hypogaea HOM05D005660 ORTHO05D006954 2.3e-58 229.6 219 58.9
FAN18G0270 Fragaria x ananassa HOM05D005660 ORTHO05D006954 3.0e-58 229.2 223 58.7
Gohir.A12G265100 Gossypium hirsutum HOM05D005660 ORTHO05D006954 3.0e-58 229.2 222 57.2
CAN.G438.109 Capsicum annuum HOM05D005660 ORTHO05D006954 8.9e-58 227.6 222 55.4
COL.COLO4_38430 Corchorus olitorius HOM05D005660 ORTHO05D006954 8.9e-58 227.6 219 56.6
Dinv36893 Davidia involucrata HOM05D005660 ORTHO05D006954 2.6e-57 226.1 214 58.4
Gohir.D12G265300 Gossypium hirsutum HOM05D005660 ORTHO05D006954 4.4e-57 225.3 222 56.8
Peaxi162Scf00015g00624 Petunia axillaris HOM05D005660 ORTHO05D006954 4.4e-57 225.3 218 56.9
Solyc03g119840.3 Solanum lycopersicum HOM05D005660 ORTHO05D006954 1.3e-56 223.8 216 54.2
Thecc.03G027100 Theobroma cacao HOM05D005660 ORTHO05D006954 1.3e-56 223.8 220 57.7
Lsat_1_v5_gn_1_15860 Lactuca sativa HOM05D005660 ORTHO05D006954 2.2e-56 223.0 219 54.8
CANSAT80G1116 Cannabis sativa HOM05D005660 ORTHO05D006954 2.9e-56 222.6 223 55.6
HanXRQChr02g0042751 Helianthus annuus HOM05D005660 ORTHO05D006954 6.4e-56 221.5 222 55.9
Medtr2g055760 Medicago truncatula HOM05D005660 ORTHO05D006954 6.4e-56 221.5 222 59.0
TWI81G0064 Tripterygium wilfordii HOM05D005660 ORTHO05D006954 6.4e-56 221.5 220 55.5
CSS0007003 Camellia sinensis var. sinensis HOM05D005660 ORTHO05D006954 2.4e-55 219.5 219 57.1
PGSC0003DMG400004073 Solanum tuberosum HOM05D005660 ORTHO05D006954 4.1e-55 218.8 216 56.9
Ciclev10022237m.g Citrus clementina HOM05D005660 ORTHO05D006954 7.0e-55 218.0 219 54.3
Manes.01G021600 Manihot esculenta HOM05D005660 ORTHO05D006954 7.0e-55 218.0 218 55.0
SalBow2G0395 Salvia bowleyana HOM05D005660 ORTHO05D006954 9.2e-55 217.6 210 56.7
Haze_18589 Corylus avellana HOM05D005660 ORTHO05D006954 1.2e-54 217.2 186 62.4
Eucgr.B00688 Eucalyptus grandis HOM05D005660 ORTHO05D006954 1.2e-54 217.2 220 55.0
Haze_18590 Corylus avellana HOM05D005660 ORTHO05D006954 2.7e-54 216.1 186 61.8
MD14G1220800 Malus domestica HOM05D005660 ORTHO05D006954 2.7e-54 216.1 232 50.4
Nitab4.5_0003716g0100 Nicotiana tabacum HOM05D005660 ORTHO05D006954 2.7e-54 216.1 215 54.4
Prupe.5G216100 Prunus persica HOM05D005660 ORTHO05D006954 2.7e-54 216.1 224 53.6
Manes.05G117900 Manihot esculenta HOM05D005660 ORTHO05D006954 4.6e-54 215.3 218 55.5
ECA247G3454 Erigeron canadensis HOM05D005660 ORTHO05D006954 7.8e-54 214.5 222 54.5
Oeu016162.1 Olea europaea HOM05D005660 ORTHO05D006954 7.8e-54 214.5 210 57.1
Psat1g025680 Pisum sativum HOM05D005660 ORTHO05D006954 7.8e-54 214.5 219 57.5
CsaV3_1G006460 Cucumis sativus L. HOM05D005660 ORTHO05D006954 1.0e-53 214.2 221 53.8
Sed0025711 Sechium edule HOM05D005660 ORTHO05D006954 1.0e-53 214.2 220 53.6
MELO3C002072.2 Cucumis melo HOM05D005660 ORTHO05D006954 2.3e-53 213.0 222 53.2
HanXRQChr04g0105941 Helianthus annuus HOM05D005660 ORTHO05D006954 5.0e-53 211.8 217 55.3
MD06G1209900 Malus domestica HOM05D005660 ORTHO05D006954 6.6e-53 211.5 231 51.5
Potri.012G059100 Populus trichocarpa HOM05D005660 ORTHO05D006954 8.6e-53 211.1 223 54.7
Actinidia39803 Actinidia chinensis HOM05D005660 ORTHO05D006954 2.5e-52 209.5 218 53.7
PGR083G1435 Punica granatum HOM05D005660 ORTHO05D006954 4.3e-52 208.8 227 52.9
Nitab4.5_0001432g0090 Nicotiana tabacum HOM05D005660 ORTHO05D006954 7.3e-52 208.0 215 53.5
Nitab4.5_0010134g0010 Nicotiana tabacum HOM05D005660 ORTHO05D006954 2.8e-51 206.1 215 53.0
Migut.K00381 Erythranthe guttata HOM05D005660 ORTHO05D006954 4.7e-51 205.3 210 55.7
Cfa019836 Carpinus fangiana HOM05D005660 ORTHO05D006954 1.0e-50 204.1 185 60.0
Hund09993 Selenicereus undatus HOM05D005660 ORTHO05D006954 2.0e-49 199.9 231 51.9
Sopen06g026530 Solanum pennellii HOM05D005660 ORTHO05D006954 3.4e-49 199.1 216 55.6
TPR.G27758 Trifolium pratense HOM05D005660 ORTHO05D006954 5.8e-49 198.4 192 59.9
Oeu027136.1 Olea europaea HOM05D005660 ORTHO05D006954 1.3e-48 197.2 184 59.2
MSTRG.9561 Avicennia marina HOM05D005660 ORTHO05D006954 1.7e-48 196.8 206 53.9
CiPaw.15G125200 Carya illinoinensis HOM05D005660 ORTHO05D006954 1.7e-48 196.8 227 52.4
Cpa.g.c34045 Carica papaya HOM05D005660 ORTHO05D006954 8.3e-48 194.5 184 57.6
Ca_02656_v3 Cicer arietinum L. HOM05D005660 ORTHO05D006954 1.4e-47 193.7 189 59.8
TAR629G1816 Trochodendron aralioides HOM05D005660 ORTHO05D006954 1.4e-47 193.7 201 53.7
Nn3g17686 Nelumbo nucifera HOM05D005660 ORTHO05D006954 1.9e-47 193.4 211 55.5
arahy.Tifrunner.gnm1.ann1.K4DBIV Arachis hypogaea HOM05D005660 ORTHO05D006954 5.4e-47 191.8 203 55.7
Nitab4.5_0000410g0170 Nicotiana tabacum HOM05D005660 ORTHO05D006954 7.0e-47 191.4 187 55.1
Sc12g0006810 Simmondsia chinensis HOM05D005660 ORTHO05D006954 3.5e-46 189.1 199 51.3
Peaxi162Scf00013g00938 Petunia axillaris HOM05D005660 ORTHO05D006954 5.0e-45 185.3 212 51.4
Sed0025679 Sechium edule HOM05D005660 ORTHO05D006954 5.0e-45 185.3 220 46.8
Aqoxy3G03878 Aquilegia oxysepala HOM05D005660 ORTHO05D006954 6.6e-45 184.9 213 48.8
EL10Ac5g11240 Beta vulgaris HOM05D005660 ORTHO05D006954 6.6e-45 184.9 224 46.4
Carub.0001s3813 Capsella rubella HOM05D005660 ORTHO05D006954 1.1e-44 184.1 227 46.7
Actinidia31034 Actinidia chinensis HOM05D005660 ORTHO05D009563 2.5e-44 183.0 184 53.8
AT1G48960 Arabidopsis thaliana HOM05D005660 ORTHO05D006954 1.4e-42 177.2 228 46.9
Ah.11g047200 Amaranthus hybridus HOM05D005660 ORTHO05D006954 3.1e-42 176.0 236 45.8
CARHR038970 Cardamine hirsuta HOM05D005660 ORTHO05D006954 6.8e-42 174.9 229 45.4
AL1G55790 Arabidopsis lyrata HOM05D005660 ORTHO05D006954 1.2e-41 174.1 228 46.9
Sp1g35870 Schrenkiella parvula HOM05D005660 ORTHO05D006954 2.0e-41 173.3 223 46.2
BcaB04g17376 Brassica carinata HOM05D005660 ORTHO05D006954 2.6e-41 172.9 220 46.4
Thhalv10011768m.g Eutrema salsugineum HOM05D005660 ORTHO05D006954 2.6e-41 172.9 225 44.4
vmacro17684 Vaccinium macrocarpon HOM05D005660 ORTHO05D006954 4.4e-41 172.2 181 51.9
BcaNung05017 Brassica carinata HOM05D005660 ORTHO05D006954 5.8e-41 171.8 224 46.0
C06p03690 Brassica napus HOM05D005660 ORTHO05D006954 5.8e-41 171.8 224 46.0
BolC6t35508H Brassica oleracea HOM05D005660 ORTHO05D006954 5.8e-41 171.8 224 46.0
Lalb_Chr13g0302411 Lupinus albus HOM05D005660 ORTHO05D006954 5.8e-41 171.8 132 68.9
GSVIVG01008223001 Vitis vinifera HOM05D005660 ORTHO05D006954 5.8e-41 171.8 214 47.7
BcaC08g43100 Brassica carinata HOM05D005660 ORTHO05D006954 7.5e-41 171.4 224 46.0
BraA06t23613Z Brassica rapa HOM05D005660 ORTHO05D006954 9.8e-41 171.0 222 45.9
A06p04080 Brassica napus HOM05D005660 ORTHO05D006954 2.2e-40 169.9 222 45.0
TAR622G0544 Trochodendron aralioides HOM05D005660 ORTHO05D006954 2.2e-40 169.9 154 55.8
AUR62032180 Chenopodium quinoa HOM05D005660 ORTHO05D006954 6.4e-40 168.3 197 49.2
PSO063G2916 Papaver somniferum HOM05D005660 ORTHO05D006954 4.1e-39 165.6 220 44.1
BcaC07g37091 Brassica carinata HOM05D005660 ORTHO05D006954 5.4e-39 165.2 223 44.8
C08p04550 Brassica napus HOM05D005660 ORTHO05D006954 5.4e-39 165.2 223 44.8
BolC8t47259H Brassica oleracea HOM05D005660 ORTHO05D006954 5.4e-39 165.2 223 44.8
A08p04280 Brassica napus HOM05D005660 ORTHO05D006954 7.1e-39 164.9 224 44.6
DCAR_011337 Daucus carota HOM05D005660 ORTHO05D006954 9.2e-39 164.5 185 49.2
Duzib084G1344 Durio zibethinus HOM05D005660 ORTHO05D006954 6.0e-38 161.8 215 46.0
THA.LOC104820410 Tarenaya hassleriana HOM05D005660 ORTHO05D006954 6.0e-38 161.8 234 45.3
PSO782G0127 Papaver somniferum HOM05D005660 ORTHO05D006954 1.7e-37 160.2 220 43.2
Aa31LG10G4970 Aethionema arabicum HOM05D005660 ORTHO05D006954 3.9e-37 159.1 215 42.8
BraA08t32455Z Brassica rapa HOM05D005660 ORTHO05D006954 4.3e-36 155.6 224 43.3
CAN.G587.76 Capsicum annuum HOM05D005660 ORTHO05D006954 4.7e-35 152.1 132 62.9
Rhsim08G0138400 Rhododendron simsii HOM05D005660 ORTHO05D006954 6.2e-35 151.8 140 55.7
Phvul.009G201000 Phaseolus vulgaris HOM05D005660 ORTHO05D006954 2.6e-33 146.4 130 63.8
Nn4g23692 Nelumbo nucifera HOM05D005660 ORTHO05D006954 1.7e-32 143.7 130 62.3
Sabra12G0040900 Salix brachista HOM05D005660 ORTHO05D006954 1.7e-32 143.7 134 59.0
AUR62036940 Chenopodium quinoa HOM05D005660 ORTHO05D006954 4.9e-32 142.1 135 56.3
Cpa.g.sc13.65 Carica papaya HOM05D005660 ORTHO05D006954 1.9e-31 140.2 131 58.0
MBI16_g23748_MAGBIO Magnolia biondii HOM05D005660 ORTHO05D006954 7.1e-31 138.3 177 46.3
ClCG04G011310 Citrullus lanatus HOM05D005660 ORTHO05D006954 1.7e-29 133.7 134 55.2
HPP92_011590 Vanilla planifolia HOM05D005660 ORTHO05D006954 1.3e-24 117.5 186 38.7
ATR0598G023 Amborella trichopoda HOM05D005660 ORTHO05D006954 2.9e-24 116.3 169 43.2
Zm00001eb126330 Zea mays HOM05D005660 ORTHO05D006954 3.5e-22 109.4 133 51.1
SEGI_40774 Sequoiadendron giganteum HOM05D005660 ORTHO05D006954 1.3e-21 107.5 166 42.2
Sopen03g038700 Solanum pennellii HOM05D005660 ORTHO05D006954 4.3e-20 102.4 105 50.5
Lalb_Chr13g0302401 Lupinus albus HOM05D005660 ORTHO05D006954 1.6e-19 100.5 87 62.1
FAN13G2173 Fragaria x ananassa HOM05D005660 ORTHO05D006954 9.9e-17 91.3 98 55.1
AagrBONN_evm.TU.Sc2ySwM_362.1267 Anthoceros agrestis HOM05D005660 ORTHO05D006954 1.3e-16 90.9 173 35.3
Solyc06g069270.1 Solanum lycopersicum HOM05D005660 ORTHO05D006954 5.4e-15 85.5 57 71.9
CDE07G0562 Ceratophyllum demersum HOM05D005660 ORTHO05D006954 4.3e-12 75.9 144 34.0
PGSC0003DMG400005618 Solanum tuberosum HOM05D005660 ORTHO05D006954 3.6e-11 72.8 78 48.7
Lalb_Chr10g0099111 Lupinus albus HOM05D001012 ORTHO05D002597 9.9e-09 64.7 134 30.6
Sabra12G0040800 Salix brachista HOM05D005660 ORTHO05D006954 3.8e-08 62.8 95 41.1
Medtr5g047050 Medicago truncatula HOM05D001012 ORTHO05D002597 3.2e-07 59.7 137 31.4
Ca_05056_v3 Cicer arietinum L. HOM05D001012 ORTHO05D002597 5.5e-07 58.9 141 31.2
Psat2g093600 Pisum sativum HOM05D001012 ORTHO05D002597 5.5e-07 58.9 135 30.4
Lj2g0027117 Lotus japonicus HOM05D001012 ORTHO05D002597 1.6e-06 57.4 135 30.4
TPR.G38561 Trifolium pratense HOM05D001012 ORTHO05D002597 2.1e-06 57.0 136 30.1


User provided reference genes

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