Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.9e-281 971.8 495 100.0
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 8.1e-256 886.7 496 91.7
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 1.9e-236 822.4 499 85.6
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 7.4e-233 810.4 499 85.2
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 9.7e-201 703.7 503 74.6
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 7.0e-199 697.6 509 73.3
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 1.2e-198 696.8 500 72.4
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 2.1e-195 686.0 504 73.4
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 1.7e-192 676.4 499 73.3
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 4.7e-187 658.3 513 69.8
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 6.1e-187 657.9 514 70.0
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 6.3e-184 647.9 495 70.9
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 1.8e-183 646.4 511 68.9
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 3.8e-181 638.6 511 68.9
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 9.5e-180 634.0 522 68.8
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 4.0e-178 628.6 527 66.2
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 5.2e-178 628.2 529 65.6
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 9.8e-177 624.0 514 66.9
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 4.9e-176 621.7 499 67.9
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 6.3e-176 621.3 515 64.1
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 1.8e-175 619.8 501 67.7
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 5.4e-175 618.2 499 69.5
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 5.0e-173 611.7 515 66.0
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 1.5e-172 610.1 509 66.6
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.9e-172 609.8 497 68.2
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 1.9e-172 609.8 501 67.3
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.5e-172 609.4 497 68.2
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 5.6e-172 608.2 501 67.5
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 9.5e-172 607.4 497 68.2
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 1.2e-171 607.1 501 67.3
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.4e-170 603.6 496 67.7
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 2.6e-169 599.4 501 65.3
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 5.7e-169 598.2 511 66.1
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 9.8e-169 597.4 504 67.7
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 2.2e-168 596.3 499 66.5
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 1.1e-164 583.9 517 65.4
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 1.6e-163 580.1 504 62.5
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 2.3e-162 576.2 514 61.7
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 3.7e-160 568.9 481 65.9
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 3.2e-159 565.8 489 65.2
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 4.1e-159 565.5 487 64.5
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 7.0e-159 564.7 521 61.4
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 2.0e-158 563.1 516 62.8
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 2.7e-158 562.8 504 63.7
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 2.3e-157 559.7 510 63.3
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 2.5e-156 556.2 505 63.2
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 2.8e-155 552.7 507 64.3
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 1.1e-154 550.8 506 61.1
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 2.0e-153 546.6 510 60.2
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 1.3e-152 543.9 510 59.4
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 2.9e-152 542.7 491 61.1
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 3.7e-152 542.3 509 61.3
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 2.1e-150 536.6 514 58.9
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 1.1e-148 530.8 492 60.2
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.9e-148 530.0 509 60.9
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 4.3e-148 528.9 495 60.8
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 3.1e-146 522.7 495 59.4
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 2.6e-145 519.6 517 58.2
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 2.6e-145 519.6 488 60.5
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 7.6e-145 518.1 496 61.5
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 3.8e-144 515.8 509 59.7
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 1.9e-143 513.5 491 60.1
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 3.0e-141 506.1 496 58.3
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 3.0e-141 506.1 577 52.2
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.1e-138 497.7 493 57.6
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 1.4e-138 497.3 487 58.7
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 5.8e-137 491.9 396 69.7
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 1.4e-135 487.3 514 55.3
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 1.4e-135 487.3 514 55.3
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 7.1e-135 485.0 490 57.3
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 3.0e-133 479.6 511 54.8
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 3.3e-132 476.1 520 54.2
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 7.6e-129 464.9 494 57.3
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 1.2e-126 457.6 496 53.8
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.8e-125 453.8 431 59.6
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 6.7e-125 451.8 503 53.5
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 6.2e-123 445.3 515 51.5
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 6.2e-123 445.3 493 53.1
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 4.0e-122 442.6 513 52.2
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 6.4e-120 435.3 508 51.2
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 7.1e-119 431.8 499 52.7
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 8.7e-117 424.9 488 51.8
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 7.4e-116 421.8 466 54.1
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 2.8e-115 419.9 493 52.3
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 1.1e-111 407.9 490 51.6
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 1.1e-111 407.9 415 58.8
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 4.2e-111 406.0 505 48.9
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 7.1e-111 405.2 476 51.3
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 2.7e-110 403.3 491 49.9
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 1.5e-108 397.5 448 53.3
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 3.4e-105 386.3 499 50.1
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 5.3e-98 362.5 340 60.3
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 7.4e-92 342.0 490 45.1
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 8.2e-91 338.6 500 46.0
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 2.6e-89 333.6 509 43.6
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 1.2e-86 324.7 504 44.0
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.2e-83 313.9 325 57.8
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 8.2e-83 312.0 303 59.7
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 2.9e-80 303.5 505 41.0
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 3.8e-80 303.1 530 38.7
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 6.7e-77 292.4 297 57.6
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 5.7e-76 289.3 539 38.0
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 7.5e-76 288.9 515 38.8
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 2.3e-69 267.3 373 45.0
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.6e-65 254.6 218 61.9
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.4e-61 241.5 234 59.8
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 1.1e-58 231.9 512 34.0
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 3.5e-57 226.9 375 44.0
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 1.6e-49 201.4 582 31.4
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 2.5e-39 167.5 512 29.7
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 1.6e-38 164.9 367 35.7
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 3.1e-37 160.6 141 62.4
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 3.3e-31 140.6 90 70.0
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 1.5e-15 88.6 64 67.2
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.4e-10 72.0 68 51.5
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 3.0e-08 64.3 66 53.0
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 5.6e-07 60.1 43 60.5
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 8.1e-06 56.2 103 41.7


User provided reference genes

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