Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G173600 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 8.8e-70 266.9 143 100.0
VMungo1215G2163 Vigna mungo HOM05D007673 ORTHO05D009278 1.2e-53 213.4 143 83.9
Glyma.13G165000 Glycine max HOM05D007673 ORTHO05D009278 1.4e-46 189.9 143 76.2
Glyma.17G106100 Glycine max HOM05D007673 ORTHO05D009278 4.0e-46 188.3 143 74.1
Lalb_Chr07g0179441 Lupinus albus HOM05D007673 ORTHO05D009278 6.1e-31 137.9 157 54.8
Medtr4g116360 Medicago truncatula HOM05D007673 ORTHO05D009278 1.0e-30 137.1 155 60.0
Lalb_Chr13g0301271 Lupinus albus HOM05D007673 ORTHO05D009278 1.0e-25 120.6 160 52.5
VMungo1309G0908 Vigna mungo HOM05D007673 ORTHO05D009278 2.1e-23 112.8 150 50.0
Phvul.009G210216 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 4.7e-23 111.7 151 47.0
TPR.G15789 Trifolium pratense HOM05D007673 ORTHO05D009278 2.6e-21 105.9 153 50.3
Lj6g0015094 Lotus japonicus HOM05D007673 ORTHO05D009278 5.8e-21 104.8 143 49.0
Psat0s503g0080 Pisum sativum HOM05D007673 ORTHO05D009278 3.7e-20 102.1 144 48.6
Psat0s5432g0040 Pisum sativum HOM05D007673 ORTHO05D009278 3.7e-20 102.1 144 48.6
Medtr2g450420 Medicago truncatula HOM05D007673 ORTHO05D009278 9.2e-19 97.4 157 45.9
Psat4g035400 Pisum sativum HOM05D007673 ORTHO05D009278 1.2e-18 97.1 144 45.1
arahy.Tifrunner.gnm1.ann1.5L22XG Arachis hypogaea HOM05D007673 ORTHO05D009278 5.6e-16 88.2 160 41.2
Potri.018G115601 Populus trichocarpa HOM05D007673 ORTHO05D009278 1.5e-13 80.1 163 39.9
arahy.Tifrunner.gnm1.ann1.L2N39S Arachis hypogaea HOM05D007673 ORTHO05D009278 1.7e-12 76.6 160 39.4
Sabra06G0043300 Salix brachista HOM05D007673 ORTHO05D009278 2.2e-12 76.3 160 42.5
TAR383G0338 Trochodendron aralioides HOM05D007673 ORTHO05D009278 1.1e-11 73.9 157 33.8
Potri.006G060000 Populus trichocarpa HOM05D007673 ORTHO05D009278 1.4e-11 73.6 161 41.0
TWI34G1167 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 3.2e-11 72.4 151 41.1
QL02p091069 Quercus lobata HOM05D007673 ORTHO05D009278 7.1e-11 71.2 159 36.5
TWI32G1294 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 1.2e-10 70.5 149 41.6
Manes.14G120200 Manihot esculenta HOM05D007673 ORTHO05D009278 1.6e-10 70.1 158 41.1
FAN28G1648 Fragaria x ananassa HOM05D022859 ORTHO05D009278 6.0e-10 68.2 145 37.2
CiPaw.16G118400 Carya illinoinensis HOM05D007673 ORTHO05D009278 1.0e-09 67.4 167 38.9
FvH4_1g01840 Fragaria vesca HOM05D022859 ORTHO05D009278 1.0e-09 67.4 145 36.6
Dinv41432 Davidia involucrata HOM05D007673 ORTHO05D009278 5.1e-09 65.1 158 38.0
CiPaw.15G183400 Carya illinoinensis HOM05D007673 ORTHO05D009278 1.1e-08 63.9 166 34.9
COL.COLO4_24126 Corchorus olitorius HOM05D007673 ORTHO05D009278 1.5e-08 63.5 160 36.2
Prupe.7G256100 Prunus persica HOM05D007673 ORTHO05D009278 3.3e-08 62.4 173 36.4
Manes.06G043400 Manihot esculenta HOM05D007673 ORTHO05D009278 4.3e-08 62.0 154 38.3
TAR625G1436 Trochodendron aralioides HOM05D007673 ORTHO05D009278 9.5e-08 60.8 159 37.1
HanXRQChr09g0243101 Helianthus annuus HOM05D007673 ORTHO05D009278 1.6e-07 60.1 150 34.0
Dinv43178 Davidia involucrata HOM05D007673 ORTHO05D009278 2.8e-07 59.3 143 36.4
Glyma.09G094100 Glycine max HOM05D012006 ORTHO05D014172 2.8e-07 59.3 73 53.4
CSS0039366 Camellia sinensis var. sinensis HOM05D007673 ORTHO05D009278 6.2e-07 58.2 162 33.3
PGSC0003DMG400030693 Solanum tuberosum HOM05D007673 ORTHO05D009278 8.1e-07 57.8 148 32.4
MBI14_g03622_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 1.1e-06 57.4 151 35.8
Peaxi162Scf00088g00016 Petunia axillaris HOM05D007673 ORTHO05D009278 2.4e-06 56.2 162 32.1
MD02G1016300 Malus domestica HOM05D007673 ORTHO05D009278 3.1e-06 55.8 164 34.1
Thecc.09G139900 Theobroma cacao HOM05D007673 ORTHO05D009278 3.1e-06 55.8 159 35.2
MD15G1160900 Malus domestica HOM05D007673 ORTHO05D009278 5.2e-06 55.1 156 35.9
Nn2g12220 Nelumbo nucifera HOM05D007673 ORTHO05D009278 5.2e-06 55.1 160 32.5


User provided reference genes

Program Settings