Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 1.1e-132 476.5 225 100.0
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 9.5e-103 377.1 190 94.2
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 4.4e-100 368.2 190 90.0
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 4.4e-100 368.2 190 89.5
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 3.1e-93 345.5 188 83.5
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 3.1e-93 345.5 188 83.5
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 6.8e-93 344.4 190 82.1
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 6.8e-93 344.4 190 82.1
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 2.6e-92 342.4 213 75.1
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 9.2e-90 334.0 184 83.7
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 2.0e-89 332.8 179 84.9
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 4.6e-89 331.6 182 82.4
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 6.6e-88 327.8 183 81.4
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 9.5e-87 323.9 183 78.7
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 1.6e-86 323.2 179 79.3
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 2.1e-86 322.8 180 80.6
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 3.6e-86 322.0 183 77.6
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 4.7e-86 321.6 183 79.8
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 8.1e-86 320.9 179 78.8
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 1.1e-85 320.5 183 77.6
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.1e-85 320.5 183 77.6
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 1.1e-85 320.5 183 79.2
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 1.4e-85 320.1 186 77.4
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 3.1e-85 318.9 182 76.9
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 5.2e-85 318.2 180 77.2
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 2.0e-84 316.2 179 77.1
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 2.0e-84 316.2 183 76.5
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 2.0e-84 316.2 180 76.7
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 2.6e-84 315.8 180 80.0
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 5.8e-84 314.7 191 75.9
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 7.5e-84 314.3 191 76.4
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 9.8e-84 313.9 174 78.7
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 2.2e-83 312.8 178 78.1
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 4.9e-83 311.6 186 76.3
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 6.4e-83 311.2 179 78.8
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 6.4e-83 311.2 183 78.1
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 8.3e-83 310.8 177 76.8
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 1.9e-82 309.7 177 79.1
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 3.2e-82 308.9 185 76.2
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 5.4e-82 308.1 179 77.7
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 9.2e-82 307.4 183 75.4
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 9.2e-82 307.4 176 77.8
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 1.2e-81 307.0 176 79.0
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 2.1e-81 306.2 185 73.5
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 2.1e-81 306.2 177 76.8
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 3.5e-81 305.4 191 74.3
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 2.3e-80 302.8 171 77.8
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 2.3e-80 302.8 177 78.0
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 3.0e-80 302.4 190 72.6
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 3.9e-80 302.0 177 75.7
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 3.9e-80 302.0 177 76.3
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 6.6e-80 301.2 180 74.4
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 8.6e-80 300.8 177 77.4
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 1.5e-79 300.1 181 74.0
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 1.5e-79 300.1 181 74.0
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 1.5e-79 300.1 215 65.1
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 1.9e-79 299.7 179 74.3
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 3.3e-79 298.9 178 75.8
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 4.3e-79 298.5 180 73.3
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 5.6e-79 298.1 179 73.7
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 7.3e-79 297.7 185 72.4
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 7.3e-79 297.7 177 75.7
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 7.3e-79 297.7 208 65.9
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 7.3e-79 297.7 180 75.0
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 9.5e-79 297.4 176 76.1
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 1.2e-78 297.0 174 76.4
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 1.6e-78 296.6 177 74.6
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 1.6e-78 296.6 179 74.9
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 1.6e-78 296.6 178 75.3
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 1.8e-77 293.1 176 74.4
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.3e-77 292.7 183 72.1
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 6.8e-77 291.2 170 75.9
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 8.9e-77 290.8 180 71.7
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 8.9e-77 290.8 178 73.0
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 1.5e-76 290.0 179 73.2
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 1.5e-76 290.0 173 74.0
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 3.4e-76 288.9 175 75.4
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 5.8e-76 288.1 169 75.7
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 7.6e-76 287.7 183 72.1
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 7.6e-76 287.7 193 68.4
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 9.9e-76 287.3 178 73.6
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 1.7e-75 286.6 179 72.6
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 2.2e-75 286.2 178 71.9
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 4.9e-75 285.0 181 71.3
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 4.9e-75 285.0 191 67.0
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 8.4e-75 284.3 181 71.3
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 8.4e-75 284.3 177 71.2
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 9.2e-74 280.8 180 70.0
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 2.7e-73 279.3 178 73.0
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.7e-72 276.6 207 61.8
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 1.7e-72 276.6 183 69.4
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 3.9e-72 275.4 170 72.9
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 1.9e-71 273.1 185 68.6
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 7.3e-71 271.2 186 67.2
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 2.4e-69 266.2 179 67.6
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 2.2e-67 259.6 184 64.7
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 1.4e-66 256.9 139 82.0
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 5.4e-66 255.0 163 69.3
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 9.6e-63 244.2 212 59.0
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.2e-59 233.0 138 74.6
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 5.1e-56 221.9 139 70.5
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 9.6e-55 217.6 172 56.4
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 2.8e-54 216.1 185 54.1
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 4.5e-52 208.8 183 51.4
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 7.2e-34 148.3 94 73.4
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 2.5e-31 139.8 132 49.2
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 8.8e-24 114.8 64 76.6
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.1e-23 114.4 75 68.0
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 4.8e-22 109.0 60 78.3
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 2.4e-21 106.7 170 37.6
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.4e-20 102.8 80 58.8
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 7.9e-17 91.7 180 34.4
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 2.7e-09 66.6 62 43.5


User provided reference genes

Program Settings