Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G172600 Phaseolus vulgaris HOM05D000004 ORTHO05D000002 2.0e-92 342.4 172 100.0
TPR.G27313 Trifolium pratense HOM05D000004 ORTHO05D000002 5.5e-18 95.1 136 39.7
Psat0s3835g0040 Pisum sativum HOM05D000004 ORTHO05D000002 1.2e-17 94.0 136 40.4
Psat1g201560 Pisum sativum HOM05D000004 ORTHO05D000002 7.9e-17 91.3 174 31.6
Psat2g056800 Pisum sativum HOM05D000004 ORTHO05D000002 1.8e-16 90.1 142 36.6
Psat5g253800 Pisum sativum HOM05D000004 ORTHO05D000002 3.9e-16 89.0 120 42.5
Psat2g059760 Pisum sativum HOM05D000004 ORTHO05D000002 5.1e-16 88.6 191 29.8
Psat5g099160 Pisum sativum HOM05D000004 ORTHO05D000002 1.1e-15 87.4 123 39.8
Psat7g017240 Pisum sativum HOM05D000004 ORTHO05D000002 1.1e-15 87.4 123 39.0
Psat0s3433g0040 Pisum sativum HOM05D000004 ORTHO05D000002 2.0e-15 86.7 185 29.7
Psat1g072000 Pisum sativum HOM05D000004 ORTHO05D000002 4.4e-15 85.5 178 33.1
Psat3g181800 Pisum sativum HOM05D000004 ORTHO05D000002 4.4e-15 85.5 178 33.1
Psat3g181760 Pisum sativum HOM05D000004 ORTHO05D000002 7.4e-15 84.7 178 33.1
Psat5g213880 Pisum sativum HOM05D000004 ORTHO05D000002 7.4e-15 84.7 120 40.8
Psat0s1551g0120 Pisum sativum HOM05D000004 ORTHO05D000002 9.7e-15 84.3 122 39.3
Psat3g197960 Pisum sativum HOM05D000004 ORTHO05D000002 9.7e-15 84.3 122 39.3
Psat6g093200 Pisum sativum HOM05D000004 ORTHO05D000002 3.7e-14 82.4 120 40.8
Medtr8g094810 Medicago truncatula HOM05D000004 ORTHO05D000002 6.3e-14 81.6 80 48.8
Psat2g127640 Pisum sativum HOM05D000004 ORTHO05D000002 6.3e-14 81.6 98 46.9
COL.COLO4_04208 Corchorus olitorius HOM05D037185 ORTHO05D000002 1.8e-13 80.1 121 38.8
ECA236G3521 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-13 80.1 146 33.6
ECA240G3042 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-13 80.1 146 33.6
Psat3g025360 Pisum sativum HOM05D000004 ORTHO05D000002 1.8e-13 80.1 110 40.0
Psat4g134960 Pisum sativum HOM05D000004 ORTHO05D000002 2.4e-13 79.7 119 38.7
Nn5g31040 Nelumbo nucifera HOM05D000004 ORTHO05D000002 3.1e-13 79.3 136 33.1
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 3.1e-13 79.3 118 39.0
Thhalv10017833m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 4.1e-13 79.0 103 40.8
ECA232G3463 Erigeron canadensis HOM05D000924 ORTHO05D001209 2.0e-12 76.6 153 32.7
ECA246G0443 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-12 76.6 122 35.2
Lalb_Chr06g0168691 Lupinus albus HOM05D000004 ORTHO05D000002 2.0e-12 76.6 171 28.1
ECA238G4401 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.6e-12 76.3 119 36.1
Nn6g31876 Nelumbo nucifera HOM05D000004 ORTHO05D000002 3.4e-12 75.9 122 35.2
Psat4g198400 Pisum sativum HOM05D000004 ORTHO05D000002 4.5e-12 75.5 163 28.2
QL05p032758 Quercus lobata HOM05D000004 ORTHO05D000002 4.5e-12 75.5 123 33.3
ECA232G0982 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.9e-12 75.1 119 35.3
Atru.chr1.2388 Acer truncatum HOM05D000004 ORTHO05D000002 7.7e-12 74.7 126 36.5
SHI16403 Sapria himalayana HOM05D000004 ORTHO05D000002 1.0e-11 74.3 164 32.9
Atru.chr2.2548 Acer truncatum HOM05D003506 ORTHO05D004063 1.3e-11 73.9 124 36.3
ECA232G1984 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-11 73.9 122 34.4
Thhalv10026804m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 1.3e-11 73.9 102 34.3
ECA246G3805 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.7e-11 73.6 122 34.4
Thhalv10027465m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 1.7e-11 73.6 114 33.3
QL12p011078 Quercus lobata HOM05D000432 ORTHO05D000002 1.7e-11 73.6 122 36.1
ECA247G3996 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.2e-11 73.2 127 33.1
Psat5g267400 Pisum sativum HOM05D000004 ORTHO05D000002 2.2e-11 73.2 130 31.5
QL02p059512 Quercus lobata HOM05D000004 ORTHO05D000002 2.2e-11 73.2 147 29.9
SHI02827 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-11 73.2 114 36.8
TPR.G11444 Trifolium pratense HOM05D000004 ORTHO05D000002 2.2e-11 73.2 46 65.2
TPR.G6317 Trifolium pratense HOM05D000004 ORTHO05D000002 2.2e-11 73.2 125 34.4
QL10p043279 Quercus lobata HOM05D000004 ORTHO05D000002 2.9e-11 72.8 184 27.7
TWI36G1188 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.9e-11 72.8 120 36.7
Psat2g029440 Pisum sativum HOM05D000004 ORTHO05D000002 3.8e-11 72.4 107 40.2
ECA240G2607 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.0e-11 72.0 122 35.2
COL.COLO4_12903 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.5e-11 71.6 132 33.3
SHI48738 Sapria himalayana HOM05D000004 ORTHO05D000002 8.5e-11 71.2 109 35.8
COL.COLO4_19395 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.4e-10 70.5 172 30.8
COL.COLO4_22673 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.5e-10 69.7 177 31.1
QL10p040115 Quercus lobata HOM05D000004 ORTHO05D000002 2.5e-10 69.7 127 31.5
Nn5g27771 Nelumbo nucifera HOM05D000004 ORTHO05D000002 4.2e-10 68.9 54 51.9
SHI33292 Sapria himalayana HOM05D000004 ORTHO05D000002 5.5e-10 68.6 105 36.2
TPR.G6049 Trifolium pratense HOM05D012325 ORTHO05D013858 5.5e-10 68.6 48 56.2
TPR.G7895 Trifolium pratense HOM05D000004 ORTHO05D000048 5.5e-10 68.6 125 32.8
Atru.chr4.870 Acer truncatum HOM05D000004 ORTHO05D000002 7.2e-10 68.2 180 31.1
ECA234G2434 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-09 67.4 133 30.1
Psat1g012480 Pisum sativum HOM05D000004 ORTHO05D000002 1.2e-09 67.4 116 33.6
Psat5g269080 Pisum sativum HOM05D004655 ORTHO05D005567 1.2e-09 67.4 58 48.3
SHI48351 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-09 67.4 130 33.1
TWI39G0003 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.2e-09 67.4 125 33.6
TWI77G0663 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.2e-09 67.4 122 32.0
Atru.chr11.883 Acer truncatum HOM05D000004 ORTHO05D000002 2.7e-09 66.2 120 35.0
Thhalv10012141m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 2.7e-09 66.2 135 30.4
Manes.11G130716 Manihot esculenta HOM05D000004 ORTHO05D000002 2.7e-09 66.2 143 27.3
QL01p053992 Quercus lobata HOM05D000004 ORTHO05D000002 2.7e-09 66.2 142 29.6
QL04p085052 Quercus lobata HOM05D000004 ORTHO05D000002 2.7e-09 66.2 142 29.6
QL08p043961 Quercus lobata HOM05D000004 ORTHO05D000002 3.6e-09 65.9 142 29.6
BolC4t24363H Brassica oleracea HOM05D000050 ORTHO05D000771 4.7e-09 65.5 131 30.5
CiPaw.09G207300 Carya illinoinensis HOM05D000004 ORTHO05D000002 4.7e-09 65.5 147 32.0
Psat1g111280 Pisum sativum HOM05D000004 ORTHO05D000002 4.7e-09 65.5 47 59.6
COL.COLO4_08404 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.1e-09 65.1 120 33.3
COL.COLO4_28963 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.1e-09 65.1 131 32.1
Nn1g00297 Nelumbo nucifera HOM05D000004 ORTHO05D000002 6.1e-09 65.1 45 55.6
Psat2g165880 Pisum sativum HOM05D000004 ORTHO05D000002 6.1e-09 65.1 105 36.2
Psat5g300080 Pisum sativum HOM05D000004 ORTHO05D000002 6.1e-09 65.1 133 31.6
Manes.08G059801 Manihot esculenta HOM05D000004 ORTHO05D000002 8.0e-09 64.7 143 27.3
SHI15690 Sapria himalayana HOM05D000004 ORTHO05D000002 8.0e-09 64.7 160 31.2
Hma1.2p1_0812F.1_g222280 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.0e-08 64.3 97 35.1
Lalb_Chr10g0106841 Lupinus albus HOM05D000004 ORTHO05D013858 1.4e-08 63.9 50 54.0
SHI44582 Sapria himalayana HOM05D000004 ORTHO05D000002 1.4e-08 63.9 140 30.7
ECA232G0168 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-08 63.5 105 32.4
Manes.03G138751 Manihot esculenta HOM05D000004 ORTHO05D000002 1.8e-08 63.5 129 27.1
SHI31642 Sapria himalayana HOM05D000004 ORTHO05D000002 1.8e-08 63.5 87 37.9
Actinidia13475 Actinidia chinensis HOM05D000004 ORTHO05D000002 2.3e-08 63.2 166 28.3
CSS0049798 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.3e-08 63.2 139 31.7
Ca_23687_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.3e-08 63.2 99 33.3
MD14G1073100 Malus domestica HOM05D001739 ORTHO05D000002 2.3e-08 63.2 121 32.2
Nn2g12379 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.3e-08 63.2 163 27.6
QL02p013964 Quercus lobata HOM05D005066 ORTHO05D006138 2.3e-08 63.2 59 39.0
CSS0007557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-08 62.8 132 33.3
COL.COLO4_20628 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.0e-08 62.8 132 31.8
Manes.12G088990 Manihot esculenta HOM05D000004 ORTHO05D000002 3.0e-08 62.8 162 24.7
Manes.17G007266 Manihot esculenta HOM05D000004 ORTHO05D000002 3.0e-08 62.8 130 29.2
Nn4g24324 Nelumbo nucifera HOM05D012325 ORTHO05D000002 3.9e-08 62.4 46 54.3
SHI24712 Sapria himalayana HOM05D000004 ORTHO05D000002 3.9e-08 62.4 193 26.9
CSS0031064 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.2e-08 62.0 139 32.4
ATR0815G060 Amborella trichopoda HOM05D000004 ORTHO05D000002 6.7e-08 61.6 52 44.2
COL.COLO4_20202 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.7e-08 61.6 161 29.2
Manes.06G033812 Manihot esculenta HOM05D000004 ORTHO05D000002 6.7e-08 61.6 130 27.7
Manes.17G118357 Manihot esculenta HOM05D000004 ORTHO05D000002 1.1e-07 60.8 131 27.5
SHI10884 Sapria himalayana HOM05D000004 ORTHO05D000002 2.6e-07 59.7 132 28.0
Ca_20534_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.3e-07 59.3 164 31.1
TWI09G0429 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.3e-07 59.3 113 31.9
CAN.G22.27 Capsicum annuum HOM05D000004 ORTHO05D000002 4.4e-07 58.9 94 34.0
TAR643G0001 Trochodendron aralioides HOM05D000004 ORTHO05D000002 4.4e-07 58.9 53 41.5
CSS0005910 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.7e-07 58.5 153 28.8
Atru.chr2.2472 Acer truncatum HOM05D000004 ORTHO05D000002 7.4e-07 58.2 82 35.4
Atru.chr6.164 Acer truncatum HOM05D000544 ORTHO05D000002 7.4e-07 58.2 121 28.1
ECA238G2583 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.7e-07 57.8 134 27.6
Psat5g300200 Pisum sativum HOM05D000004 ORTHO05D000002 9.7e-07 57.8 53 49.1
SpUn0005_0210 Schrenkiella parvula HOM05D000004 ORTHO05D000002 9.7e-07 57.8 97 33.0
Atru.chr6.521 Acer truncatum HOM05D000004 ORTHO05D000002 1.3e-06 57.4 120 34.2
Nn2g14669 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.3e-06 57.4 122 29.5
Psat6g169440 Pisum sativum HOM05D012325 ORTHO05D013858 1.3e-06 57.4 97 33.0
Psat6g169480 Pisum sativum HOM05D028757 ORTHO05D000002 1.3e-06 57.4 97 33.0
COL.COLO4_36542 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.7e-06 57.0 67 47.8
Hma1.2p1_1820F.1_g304130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.7e-06 57.0 137 29.9
Phvul.001G091900 Phaseolus vulgaris HOM05D003122 ORTHO05D000002 1.7e-06 57.0 119 31.1
CSS0032753 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-06 56.6 134 29.9
RcHm_v2.0_Chr5g0078031 Rosa chinensis HOM05D000004 ORTHO05D000002 2.2e-06 56.6 123 26.0
CAN.G464.27 Capsicum annuum HOM05D000004 ORTHO05D000002 2.8e-06 56.2 96 34.4
FvH4_2g19792 Fragaria vesca HOM05D000004 ORTHO05D000002 3.7e-06 55.8 123 28.5
Manes.17G016004 Manihot esculenta HOM05D000004 ORTHO05D000002 3.7e-06 55.8 130 26.2
Psat4g028160 Pisum sativum HOM05D000004 ORTHO05D000002 4.8e-06 55.5 199 26.6
Atru.chr2.1912 Acer truncatum HOM05D000004 ORTHO05D000002 6.3e-06 55.1 122 33.6
PSO541G3617 Papaver somniferum HOM05D000004 ORTHO05D000002 6.3e-06 55.1 162 26.5
PGSC0003DMG400019194 Solanum tuberosum HOM05D014085 ORTHO05D010293 6.3e-06 55.1 51 41.2
TWI09G0741 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.3e-06 55.1 122 27.9


User provided reference genes

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