Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G170800 Phaseolus vulgaris HOM05D005830 ORTHO05D007212 3.3e-198 694.9 367 100.0
VMungo1215G0722 Vigna mungo HOM05D005830 ORTHO05D007212 1.6e-176 622.9 367 90.2
Glyma.17G109300 Glycine max HOM05D005830 ORTHO05D007212 3.3e-153 545.4 366 79.2
arahy.Tifrunner.gnm1.ann1.N1L3G9 Arachis hypogaea HOM05D005830 ORTHO05D007212 1.8e-122 443.4 398 63.6
Lj4g0000922 Lotus japonicus HOM05D005830 ORTHO05D007212 8.7e-122 441.0 368 66.3
Lalb_Chr13g0301421 Lupinus albus HOM05D005830 ORTHO05D007212 1.5e-121 440.3 390 63.1
CiPaw.03G250100 Carya illinoinensis HOM05D005830 ORTHO05D007212 2.9e-117 426.0 406 59.4
Ca_21656_v3 Cicer arietinum L. HOM05D005830 ORTHO05D007212 6.5e-117 424.9 359 64.1
CiPaw.04G176400 Carya illinoinensis HOM05D005830 ORTHO05D007212 1.1e-116 424.1 398 59.8
MD02G1021100 Malus domestica HOM05D005830 ORTHO05D007212 1.9e-116 423.3 382 61.5
QL02p090253 Quercus lobata HOM05D005830 ORTHO05D007212 1.9e-116 423.3 412 57.8
Ciclev10008496m.g Citrus clementina HOM05D005830 ORTHO05D007212 4.2e-116 422.2 398 60.1
Atru.chr7.1975 Acer truncatum HOM05D005830 ORTHO05D007212 9.3e-116 421.0 396 59.3
Prupe.7G250400 Prunus persica HOM05D005830 ORTHO05D007212 1.6e-115 420.2 402 57.7
TWI63G1326 Tripterygium wilfordii HOM05D005830 ORTHO05D007212 7.9e-115 417.9 389 61.4
GSVIVG01012831001 Vitis vinifera HOM05D005830 ORTHO05D007212 3.0e-114 416.0 379 63.1
Cfa002293 Carpinus fangiana HOM05D005830 ORTHO05D007212 6.7e-114 414.8 401 58.9
MD15G1164200 Malus domestica HOM05D005830 ORTHO05D007212 7.4e-113 411.4 379 59.9
Manes.06G045500 Manihot esculenta HOM05D005830 ORTHO05D007212 7.4e-113 411.4 393 58.0
Potri.018G123400 Populus trichocarpa HOM05D005830 ORTHO05D007212 1.3e-112 410.6 382 60.2
Haze_25480 Corylus avellana HOM05D005830 ORTHO05D007212 4.8e-112 408.7 403 58.3
Psat4g036280 Pisum sativum HOM05D005830 ORTHO05D007212 6.3e-112 408.3 365 61.9
TPR.G956 Trifolium pratense HOM05D005830 ORTHO05D007212 6.3e-112 408.3 363 62.5
Sc08g0006200 Simmondsia chinensis HOM05D005830 ORTHO05D007212 2.4e-111 406.4 387 59.7
ClCG06G011670 Citrullus lanatus HOM05D005830 ORTHO05D007212 5.3e-111 405.2 399 56.9
RcHm_v2.0_Chr2g0087391 Rosa chinensis HOM05D005830 ORTHO05D007212 5.3e-111 405.2 386 59.8
CANSAT11G0221 Cannabis sativa HOM05D005830 ORTHO05D007212 2.6e-110 402.9 415 57.6
Gorai.009G015000 Gossypium raimondii HOM05D005830 ORTHO05D007212 4.5e-110 402.1 391 59.1
Potri.006G063600 Populus trichocarpa HOM05D005830 ORTHO05D007212 4.5e-110 402.1 382 59.4
Eucgr.C00582 Eucalyptus grandis HOM05D005830 ORTHO05D007212 1.0e-109 401.0 391 58.8
Nn8g39584 Nelumbo nucifera HOM05D005830 ORTHO05D007212 1.1e-108 397.5 389 58.6
CsaV3_1G027980 Cucumis sativus L. HOM05D005830 ORTHO05D007212 1.4e-108 397.1 387 55.8
Sabra06G0046300 Salix brachista HOM05D005830 ORTHO05D007212 1.4e-108 397.1 383 58.7
Cpa.g.sc46.60 Carica papaya HOM05D005830 ORTHO05D007212 2.5e-108 396.4 389 57.8
Duzib150G0784 Durio zibethinus HOM05D005830 ORTHO05D007212 3.2e-108 396.0 381 59.6
Dinv36464 Davidia involucrata HOM05D005830 ORTHO05D007212 5.5e-108 395.2 400 57.2
TAR636G3280 Trochodendron aralioides HOM05D005830 ORTHO05D007212 7.2e-108 394.8 396 57.8
FAN23G1789 Fragaria x ananassa HOM05D005830 ORTHO05D007212 9.3e-108 394.4 388 58.8
Gohir.A05G013800 Gossypium hirsutum HOM05D005830 ORTHO05D007212 1.2e-107 394.0 391 58.8
Hma1.2p1_0497F.1_g166530 Hydrangea macrophylla HOM05D005830 ORTHO05D007212 1.2e-107 394.0 399 55.6
FAN28G1643 Fragaria x ananassa HOM05D005830 ORTHO05D007212 1.6e-107 393.7 388 58.8
Lj9A701G52 Lonicera japonica HOM05D005830 ORTHO05D007212 1.6e-107 393.7 388 57.2
FvH4_1g02430 Fragaria vesca HOM05D005830 ORTHO05D007212 2.1e-107 393.3 384 58.1
FAN19G1317 Fragaria x ananassa HOM05D005830 ORTHO05D007212 2.1e-107 393.3 384 58.1
MELO3C010295.2 Cucumis melo HOM05D005830 ORTHO05D007212 3.6e-107 392.5 388 55.2
Nn2g12145 Nelumbo nucifera HOM05D005830 ORTHO05D007212 3.6e-107 392.5 402 57.2
TAR625G0228 Trochodendron aralioides HOM05D005830 ORTHO05D007212 3.6e-107 392.5 396 57.1
Gohir.D05G014900 Gossypium hirsutum HOM05D005830 ORTHO05D007212 6.1e-107 391.7 391 58.3
Sed0009357 Sechium edule HOM05D005830 ORTHO05D007212 7.9e-107 391.3 385 55.8
vmacro06159 Vaccinium macrocarpon HOM05D005830 ORTHO05D007212 1.0e-106 391.0 398 56.5
Ah.09g224370 Amaranthus hybridus HOM05D005830 ORTHO05D007212 1.8e-106 390.2 394 55.6
Dinv41459 Davidia involucrata HOM05D005830 ORTHO05D007212 1.8e-106 390.2 384 57.8
Sabra18G0105100 Salix brachista HOM05D005830 ORTHO05D007212 6.7e-106 388.3 375 58.7
Manes.14G117500 Manihot esculenta HOM05D005830 ORTHO05D007212 8.7e-106 387.9 388 57.7
Medtr4g115690 Medicago truncatula HOM05D005830 ORTHO05D007212 2.5e-105 386.3 340 62.6
PGR142G1093 Punica granatum HOM05D005830 ORTHO05D007212 8.2e-104 381.3 370 57.6
EL10Ac8g18756 Beta vulgaris HOM05D005830 ORTHO05D007212 5.3e-103 378.6 402 53.7
MBI14_g38128_MAGBIO Magnolia biondii HOM05D005830 ORTHO05D007212 2.0e-102 376.7 394 54.3
Thecc.09G135000 Theobroma cacao HOM05D005830 ORTHO05D007212 3.4e-102 375.9 387 57.1
Nitab4.5_0000704g0010 Nicotiana tabacum HOM05D005830 ORTHO05D007212 1.0e-101 374.4 403 56.1
Peaxi162Scf00088g00106 Petunia axillaris HOM05D005830 ORTHO05D007212 1.0e-101 374.4 416 53.4
Aqoxy7G03615 Aquilegia oxysepala HOM05D005830 ORTHO05D007212 1.3e-101 374.0 395 54.9
Lsat_1_v5_gn_5_93541 Lactuca sativa HOM05D005830 ORTHO05D007212 1.1e-100 370.9 376 55.1
Nitab4.5_0002267g0050 Nicotiana tabacum HOM05D005830 ORTHO05D007212 1.4e-100 370.5 406 54.9
DCAR_020892 Daucus carota HOM05D005830 ORTHO05D007212 5.5e-100 368.6 379 55.4
AUR62013287 Chenopodium quinoa HOM05D005830 ORTHO05D007212 7.2e-100 368.2 408 53.2
COL.COLO4_15558 Corchorus olitorius HOM05D005830 ORTHO05D007212 1.6e-99 367.1 387 55.6
Cc06_g07840 Coffea canephora HOM05D005830 ORTHO05D007212 3.2e-92 342.8 405 50.4
HanXRQChr10g0314411 Helianthus annuus HOM05D005830 ORTHO05D007212 8.8e-90 334.7 383 51.7
PGSC0003DMG400030680 Solanum tuberosum HOM05D005830 ORTHO05D007212 2.6e-89 333.2 374 52.9
CAN.G1382.7 Capsicum annuum HOM05D005830 ORTHO05D007212 9.7e-89 331.3 452 45.4
Sopen07g003650 Solanum pennellii HOM05D005830 ORTHO05D007212 9.7e-89 331.3 367 52.6
Solyc07g007660.1 Solanum lycopersicum HOM05D005830 ORTHO05D007212 1.4e-87 327.4 367 52.0
HanXRQChr12g0356861 Helianthus annuus HOM05D005830 ORTHO05D007212 5.3e-87 325.5 382 49.7
QL02p021141 Quercus lobata HOM05D005830 ORTHO05D007212 5.3e-87 325.5 390 47.9
CiPaw.08G009900 Carya illinoinensis HOM05D005830 ORTHO05D007212 3.6e-83 312.8 394 47.0
vmacro05164 Vaccinium macrocarpon HOM05D005830 ORTHO05D007212 2.3e-82 310.1 397 46.1
MSTRG.10652 Avicennia marina HOM05D005830 ORTHO05D007212 4.4e-81 305.8 385 47.5
Ciclev10010445m.g Citrus clementina HOM05D005830 ORTHO05D007212 2.4e-79 300.1 379 47.8
Manes.16G124200 Manihot esculenta HOM05D002641 ORTHO05D001537 4.1e-79 299.3 393 46.3
Rhsim03G0252000 Rhododendron simsii HOM05D005830 ORTHO05D007212 2.0e-78 297.0 281 59.8
Dinv05006 Davidia involucrata HOM05D005830 ORTHO05D007212 7.7e-78 295.0 382 45.5
Rhsim07G0159800 Rhododendron simsii HOM05D005830 ORTHO05D007212 1.3e-77 294.3 397 44.1
CiPaw.07G225200 Carya illinoinensis HOM05D005830 ORTHO05D007212 1.7e-77 293.9 387 44.7
ATR0800G042 Amborella trichopoda HOM05D005830 ORTHO05D007212 1.1e-76 291.2 365 48.2
Lj1g0023135 Lotus japonicus HOM05D005830 ORTHO05D007212 1.5e-76 290.8 386 45.9
Glyma.04G065400 Glycine max HOM05D005830 ORTHO05D007212 1.9e-76 290.4 372 47.3
Gorai.009G059500 Gossypium raimondii HOM05D005830 ORTHO05D007212 1.9e-76 290.4 336 50.6
Prupe.1G483400 Prunus persica HOM05D005830 ORTHO05D007212 3.2e-76 289.7 387 45.0
Gohir.D05G058400 Gossypium hirsutum HOM05D005830 ORTHO05D007212 4.2e-76 289.3 336 50.3
Sabra06G0201100 Salix brachista HOM05D005830 ORTHO05D007212 1.4e-74 284.3 397 44.1
TPR.G3136 Trifolium pratense HOM05D005830 ORTHO05D007212 1.4e-74 284.3 371 44.5
Ca_15753_v3 Cicer arietinum L. HOM05D005830 ORTHO05D007212 6.8e-74 282.0 371 44.5
Oeu052743.1 Olea europaea HOM05D005830 ORTHO05D007212 6.8e-74 282.0 376 44.4
Medtr3g106630 Medicago truncatula HOM05D005830 ORTHO05D007212 2.0e-73 280.4 375 44.8
Psat5g029840 Pisum sativum HOM05D005830 ORTHO05D007212 2.0e-73 280.4 371 44.2
COL.COLO4_18887 Corchorus olitorius HOM05D005830 ORTHO05D007212 3.4e-73 279.6 378 44.2
Eucgr.C02754 Eucalyptus grandis HOM05D005830 ORTHO05D007212 7.5e-73 278.5 384 43.2
MD15G1128100 Malus domestica HOM05D005830 ORTHO05D007212 9.8e-73 278.1 368 45.4
RcHm_v2.0_Chr6g0297551 Rosa chinensis HOM05D005830 ORTHO05D007212 2.2e-72 276.9 369 43.6
Cfa013122 Carpinus fangiana HOM05D005830 ORTHO05D007212 4.8e-72 275.8 382 43.7
Lalb_Chr11g0063651 Lupinus albus HOM05D005830 ORTHO05D007212 4.8e-72 275.8 384 42.7
VMungo1309G0557 Vigna mungo HOM05D005830 ORTHO05D007212 4.8e-72 275.8 376 44.9
Potri.006G256900 Populus trichocarpa HOM05D005830 ORTHO05D007212 6.3e-72 275.4 379 44.6
FAN15G2262 Fragaria x ananassa HOM05D005830 ORTHO05D007212 1.4e-71 274.2 367 44.4
Migut.K00413 Erythranthe guttata HOM05D005830 ORTHO05D007212 5.4e-71 272.3 375 46.4
FAN20G1042 Fragaria x ananassa HOM05D005830 ORTHO05D007212 5.4e-71 272.3 367 43.9
Thecc.09G021700 Theobroma cacao HOM05D005830 ORTHO05D007212 5.4e-71 272.3 391 41.4
Actinidia14593 Actinidia chinensis HOM05D000485 ORTHO05D000341 3.5e-70 269.6 300 48.0
FvH4_2g28800 Fragaria vesca HOM05D005830 ORTHO05D007212 3.5e-70 269.6 376 42.8
FAN27G1157 Fragaria x ananassa HOM05D005830 ORTHO05D007212 3.5e-70 269.6 367 43.1
SalBow1G4219 Salvia bowleyana HOM05D005830 ORTHO05D007212 3.5e-70 269.6 375 45.6
Oeu056965.1 Olea europaea HOM05D005830 ORTHO05D007212 5.9e-70 268.9 337 46.3
arahy.Tifrunner.gnm1.ann1.TZG1XT Arachis hypogaea HOM05D000451 ORTHO05D000351 2.3e-69 266.9 345 48.1
Phvul.009G091500 Phaseolus vulgaris HOM05D005830 ORTHO05D007212 2.3e-69 266.9 379 44.6
ECA234G3193 Erigeron canadensis HOM05D005830 ORTHO05D007212 3.8e-69 266.2 269 53.5
FAN24G0474 Fragaria x ananassa HOM05D005830 ORTHO05D007212 6.5e-69 265.4 376 42.0
Aqoxy4G01850 Aquilegia oxysepala HOM05D005830 ORTHO05D007212 5.5e-68 262.3 292 51.4
unitig_0.g2712 Utricularia gibba HOM05D005830 ORTHO05D007212 2.8e-67 260.0 375 42.4
AUR62011200 Chenopodium quinoa HOM05D005830 ORTHO05D007212 2.3e-66 256.9 310 48.1
Sc06g0000560 Simmondsia chinensis HOM05D005830 ORTHO05D007212 5.7e-65 252.3 392 40.3
EL10Ac2g04187 Beta vulgaris HOM05D005830 ORTHO05D007212 3.7e-64 249.6 288 48.3
Ah.16g104630 Amaranthus hybridus HOM05D000524 ORTHO05D000381 8.6e-61 238.4 283 46.6
HPP92_010549 Vanilla planifolia HOM05D005830 ORTHO05D007212 4.3e-60 236.1 339 44.5
Actinidia26367 Actinidia chinensis HOM05D005830 ORTHO05D007212 3.9e-53 213.0 381 42.3
AUR62012424 Chenopodium quinoa HOM05D005830 ORTHO05D007212 4.7e-51 206.1 362 37.0
FAN26G3009 Fragaria x ananassa HOM05D005830 ORTHO05D007212 1.2e-49 201.4 165 64.8
SEGI_15152 Sequoiadendron giganteum HOM05D005830 ORTHO05D007212 3.4e-49 199.9 456 30.7
Medtr4g014150 Medicago truncatula HOM05D005830 ORTHO05D007212 9.5e-44 181.8 262 45.0
AUR62031547 Chenopodium quinoa HOM05D005830 ORTHO05D007212 5.2e-42 176.0 236 43.2
HPP92_027271 Vanilla planifolia HOM05D005830 ORTHO05D007212 8.6e-37 158.7 163 52.1
Glyma.16G087650 Glycine max HOM05D005830 ORTHO05D007212 4.4e-33 146.4 163 53.4
Glyma.01G070700 Glycine max HOM05D002723 ORTHO05D003240 9.9e-33 145.2 114 69.3
Glyma.13G162000 Glycine max HOM05D005830 ORTHO05D007212 1.2e-27 128.3 82 80.5
Lj7P437T13 Lonicera japonica HOM05D005830 ORTHO05D007212 9.0e-26 122.1 167 43.7
Glyma.06G066550 Glycine max HOM05D005830 ORTHO05D007212 3.8e-24 116.7 120 51.7
QL08p064688 Quercus lobata HOM05D005830 ORTHO05D007212 3.2e-23 113.6 148 47.3
CANSAT11G0844 Cannabis sativa HOM05D002008 ORTHO05D002054 8.7e-13 79.0 68 61.8
Haze_21491 Corylus avellana HOM05D005830 ORTHO05D007212 7.4e-12 75.9 155 35.5
VMungo1309G2190 Vigna mungo HOM05D005830 ORTHO05D026219 7.4e-12 75.9 72 52.8


User provided reference genes

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