Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G164400 Phaseolus vulgaris HOM05D007698 ORTHO05D009663 1.9e-124 449.1 221 100.0
VMungo1215G1358 Vigna mungo HOM05D007698 ORTHO05D009663 9.9e-113 410.2 213 93.9
Glyma.13G167300 Glycine max HOM05D007698 ORTHO05D009663 4.6e-102 374.8 221 84.6
arahy.Tifrunner.gnm1.ann1.W83AFC Arachis hypogaea HOM05D007698 ORTHO05D009663 2.5e-100 369.0 221 82.4
Psat4g040160 Pisum sativum HOM05D007698 ORTHO05D009663 1.3e-99 366.7 223 81.6
TPR.G10704 Trifolium pratense HOM05D007698 ORTHO05D009663 1.2e-97 360.1 222 80.6
arahy.Tifrunner.gnm1.ann1.K2HWUU Arachis hypogaea HOM05D007698 ORTHO05D009663 2.0e-97 359.4 215 82.8
Ca_21682_v3 Cicer arietinum L. HOM05D007698 ORTHO05D009663 3.8e-96 355.1 213 82.6
Lalb_Chr13g0301871 Lupinus albus HOM05D007698 ORTHO05D009663 8.4e-96 354.0 225 78.7
Lj4g0022576 Lotus japonicus HOM05D007698 ORTHO05D009663 2.5e-92 342.4 216 79.2
arahy.Tifrunner.gnm1.ann1.DB6URZ Arachis hypogaea HOM05D007698 ORTHO05D009663 2.1e-91 339.3 201 83.1
Medtr4g114410 Medicago truncatula HOM05D007698 ORTHO05D009663 2.4e-90 335.9 205 79.5
Manes.14G132100 Manihot esculenta HOM05D007698 ORTHO05D009663 4.8e-83 311.6 213 70.0
Atru.chr7.1161 Acer truncatum HOM05D007698 ORTHO05D009663 8.2e-83 310.8 213 70.9
QL10p023449 Quercus lobata HOM05D007698 ORTHO05D009663 8.2e-83 310.8 210 71.9
GSVIVG01015531001 Vitis vinifera HOM05D007698 ORTHO05D009663 1.1e-82 310.5 211 72.0
Cpa.g.sc75.28 Carica papaya HOM05D007698 ORTHO05D009663 1.4e-82 310.1 213 70.9
Ciclev10009487m.g Citrus clementina HOM05D007698 ORTHO05D009663 3.1e-82 308.9 211 71.6
TAR625G0118 Trochodendron aralioides HOM05D007698 ORTHO05D009663 4.1e-82 308.5 213 70.4
Actinidia07425 Actinidia chinensis HOM05D007698 ORTHO05D009663 9.0e-82 307.4 213 70.0
Gohir.A06G056000 Gossypium hirsutum HOM05D007698 ORTHO05D009663 9.0e-82 307.4 206 71.8
Nn2g12029 Nelumbo nucifera HOM05D007698 ORTHO05D009663 9.0e-82 307.4 213 70.9
CiPaw.04G171100 Carya illinoinensis HOM05D007698 ORTHO05D009663 2.0e-81 306.2 210 69.5
PGR142G3861 Punica granatum HOM05D007698 ORTHO05D009663 2.6e-81 305.8 213 72.3
Cfa003373 Carpinus fangiana HOM05D007698 ORTHO05D009663 5.9e-81 304.7 210 69.5
Gorai.010G064000 Gossypium raimondii HOM05D007698 ORTHO05D009663 1.3e-80 303.5 206 70.9
Thecc.09G126500 Theobroma cacao HOM05D007698 ORTHO05D009663 8.5e-80 300.8 211 70.1
Eucgr.C01174 Eucalyptus grandis HOM05D007698 ORTHO05D009663 1.4e-79 300.1 215 68.8
Rhsim03G0248000 Rhododendron simsii HOM05D007698 ORTHO05D009663 1.4e-79 300.1 214 69.2
arahy.Tifrunner.gnm1.ann1.UUR3FU Arachis hypogaea HOM05D007698 ORTHO05D009663 3.2e-79 298.9 234 68.4
Potri.006G069900 Populus trichocarpa HOM05D007698 ORTHO05D009663 1.6e-78 296.6 210 69.0
RcHm_v2.0_Chr2g0088411 Rosa chinensis HOM05D007698 ORTHO05D009663 2.7e-78 295.8 210 68.6
FAN23G0447 Fragaria x ananassa HOM05D007698 ORTHO05D009663 6.1e-78 294.7 210 68.1
CANSAT11G0563 Cannabis sativa HOM05D007698 ORTHO05D009663 7.9e-78 294.3 215 69.8
FAN28G0224 Fragaria x ananassa HOM05D007698 ORTHO05D009663 2.3e-77 292.7 210 68.1
MD02G1032500 Malus domestica HOM05D007698 ORTHO05D009663 2.3e-77 292.7 213 68.1
FvH4_1g03270 Fragaria vesca HOM05D007698 ORTHO05D009663 3.9e-77 292.0 210 68.1
HanXRQChr10g0315501 Helianthus annuus HOM05D007698 ORTHO05D009663 5.1e-77 291.6 214 67.3
Prupe.7G243000 Prunus persica HOM05D007698 ORTHO05D009663 1.5e-76 290.0 213 66.7
AUR62013358 Chenopodium quinoa HOM05D007698 ORTHO05D009663 7.4e-76 287.7 237 64.1
Aqoxy7G02180 Aquilegia oxysepala HOM05D007698 ORTHO05D009663 1.7e-75 286.6 218 69.3
TWI63G1008 Tripterygium wilfordii HOM05D007698 ORTHO05D009663 4.1e-74 282.0 184 72.3
EL10Ac8g18655 Beta vulgaris HOM05D007698 ORTHO05D009663 1.2e-73 280.4 212 69.3
Sed0013311 Sechium edule HOM05D007698 ORTHO05D009663 1.5e-73 280.0 214 67.3
MELO3C004507.2 Cucumis melo HOM05D007698 ORTHO05D009663 4.5e-73 278.5 214 66.4
CsaV3_2G002860 Cucumis sativus L. HOM05D007698 ORTHO05D009663 4.5e-73 278.5 214 65.9
ClCG11G003040 Citrullus lanatus HOM05D007698 ORTHO05D009663 6.5e-72 274.6 228 62.7
Peaxi162Scf00684g00033 Petunia axillaris HOM05D007698 ORTHO05D009663 6.5e-72 274.6 212 64.2
CDE06G2164 Ceratophyllum demersum HOM05D007698 ORTHO05D009663 3.2e-71 272.3 215 64.2
ATR1120G147 Amborella trichopoda HOM05D007698 ORTHO05D009663 5.5e-71 271.6 182 70.9
MBI01_g36268_MAGBIO Magnolia biondii HOM05D007698 ORTHO05D009663 5.5e-71 271.6 191 69.6
Oeu055888.1 Olea europaea HOM05D007698 ORTHO05D009663 7.2e-71 271.2 213 63.4
PSO455G0268 Papaver somniferum HOM05D007698 ORTHO05D009663 2.1e-70 269.6 168 76.2
PGSC0003DMG400003777 Solanum tuberosum HOM05D007698 ORTHO05D009663 3.6e-70 268.9 216 64.4
Cc06_g08510 Coffea canephora HOM05D007698 ORTHO05D009663 4.7e-70 268.5 216 62.0
PSO170G4754 Papaver somniferum HOM05D007698 ORTHO05D009663 1.4e-69 266.9 168 75.6
Solyc04g081330.4 Solanum lycopersicum HOM05D007698 ORTHO05D009663 3.0e-69 265.8 216 62.5
Sopen04g034950 Solanum pennellii HOM05D007698 ORTHO05D009663 3.0e-69 265.8 218 62.8
Nitab4.5_0008782g0040 Nicotiana tabacum HOM05D007698 ORTHO05D009663 5.2e-69 265.0 183 71.0
ECA234G1302 Erigeron canadensis HOM05D007698 ORTHO05D009663 1.1e-68 263.8 152 77.6
Haze_25578 Corylus avellana HOM05D007698 ORTHO05D009663 1.5e-68 263.5 189 67.2
SMO351G0097 Selaginella moellendorffii HOM05D007698 ORTHO05D009663 2.0e-68 263.1 156 77.6
SEGI_02335 Sequoiadendron giganteum HOM05D007698 ORTHO05D009663 2.6e-68 262.7 160 77.5
CAN.G311.17 Capsicum annuum HOM05D007698 ORTHO05D009663 3.3e-68 262.3 217 60.8
Os05g0401200 Oryza sativa ssp. japonica HOM05D007698 ORTHO05D009663 3.3e-68 262.3 213 63.4
MSTRG.19596 Avicennia marina HOM05D007698 ORTHO05D009663 4.4e-68 261.9 212 62.3
Hund26504 Selenicereus undatus HOM05D007698 ORTHO05D009663 9.7e-68 260.8 215 61.4
Nitab4.5_0010964g0010 Nicotiana tabacum HOM05D007698 ORTHO05D009663 1.3e-67 260.4 216 61.6
Mapoly0135s0019 Marchantia polymorpha HOM05D007698 ORTHO05D009663 2.8e-67 259.2 163 74.2
SalBow5G0976 Salvia bowleyana HOM05D007698 ORTHO05D009663 1.4e-66 256.9 161 73.9
HPP92_024087 Vanilla planifolia HOM05D007698 ORTHO05D009663 1.8e-66 256.5 170 69.4
DCAR_020920 Daucus carota HOM05D007698 ORTHO05D009663 2.4e-66 256.1 188 63.3
Pp3c7_12150 Physcomitrium patens HOM05D007698 ORTHO05D009663 5.9e-65 251.5 156 74.4
Migut.D01902 Erythranthe guttata HOM05D007698 ORTHO05D009663 2.2e-64 249.6 160 72.5
FAN19G0166 Fragaria x ananassa HOM05D007698 ORTHO05D009663 2.5e-63 246.1 189 65.1
vmacro06130 Vaccinium macrocarpon HOM05D007698 ORTHO05D009663 5.5e-63 245.0 148 79.1
Hma1.2p1_2368F.1_g320690 Hydrangea macrophylla HOM05D007698 ORTHO05D009663 1.3e-59 233.8 212 58.0
Hma1.2p1_0018F.1_g012410 Hydrangea macrophylla HOM05D007698 ORTHO05D009663 3.7e-59 232.3 211 57.8
Gohir.D06G054575 Gossypium hirsutum HOM05D007698 ORTHO05D009663 3.5e-57 225.7 167 66.5
AUR62011129 Chenopodium quinoa HOM05D007698 ORTHO05D009663 3.8e-56 222.2 143 75.5
SalBow5G4762 Salvia bowleyana HOM05D007698 ORTHO05D009663 7.0e-50 201.4 161 62.1
Glyma.17G114902 Glycine max HOM05D007698 ORTHO05D009663 2.2e-48 196.4 109 85.3
Cre07.g323600 Chlamydomonas reinhardtii HOM05D007698 ORTHO05D009663 1.2e-46 190.7 143 62.9
Sc08g0006600 Simmondsia chinensis HOM05D007698 ORTHO05D009663 6.6e-40 168.3 152 60.5
FAN26G2937 Fragaria x ananassa HOM05D007698 ORTHO05D009663 8.6e-40 167.9 161 56.5
Zm00001eb203770 Zea mays HOM05D007698 ORTHO05D009663 1.3e-32 144.1 123 58.5
SGA_v2.0_scaffold71G23757 Striga asiatica HOM05D007698 ORTHO05D009663 2.5e-31 139.8 129 54.3
Dinv36527 Davidia involucrata HOM05D007698 ORTHO05D009663 3.3e-31 139.4 130 57.7
MCO02G310 Micromonas commoda HOM05D007698 ORTHO05D009663 7.8e-25 118.2 151 45.0
unitig_749.g14098 Utricularia gibba HOM05D007698 ORTHO05D009663 2.0e-20 103.6 83 61.4
PRCOL_00004764 Prasinoderma coloniale HOM05D007698 ORTHO05D009663 6.6e-16 88.6 153 39.2
Hund09129 Selenicereus undatus HOM05D007698 ORTHO05D009663 3.8e-11 72.8 48 70.8


User provided reference genes

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