Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G163100 Phaseolus vulgaris HOM05D002931 ORTHO05D003273 8.0e-242 840.1 458 100.0
VMungo1215G0028 Vigna mungo HOM05D002931 ORTHO05D003273 1.9e-182 642.9 410 88.8
Glyma.05G008000 Glycine max HOM05D002931 ORTHO05D003273 2.2e-151 539.7 411 70.8
Glyma.17G116200 Glycine max HOM05D002931 ORTHO05D003273 4.2e-150 535.4 413 70.2
Lj4g0003419 Lotus japonicus HOM05D002931 ORTHO05D003273 6.4e-122 441.8 392 65.3
Ca_21694_v3 Cicer arietinum L. HOM05D002931 ORTHO05D003273 3.1e-116 422.9 397 62.7
arahy.Tifrunner.gnm1.ann1.RS0TAB Arachis hypogaea HOM05D002931 ORTHO05D003273 3.2e-113 412.9 417 58.0
TPR.G10690 Trifolium pratense HOM05D002931 ORTHO05D001597 3.5e-112 409.5 422 58.5
arahy.Tifrunner.gnm1.ann1.6CVH65 Arachis hypogaea HOM05D002931 ORTHO05D003273 6.0e-112 408.7 418 57.9
Lalb_Chr07g0178821 Lupinus albus HOM05D002931 ORTHO05D003273 5.8e-107 392.1 409 59.4
Psat4g041000 Pisum sativum HOM05D002931 ORTHO05D003273 9.9e-107 391.3 406 58.6
Medtr4g114040 Medicago truncatula HOM05D002931 ORTHO05D003273 3.1e-100 369.8 382 58.6
Cfa003349 Carpinus fangiana HOM05D002931 ORTHO05D003273 1.8e-63 247.7 390 43.1
Haze_25612 Corylus avellana HOM05D002931 ORTHO05D001597 3.3e-62 243.4 390 42.3
GSVIVG01015505001 Vitis vinifera HOM05D002931 ORTHO05D003273 4.3e-62 243.0 363 44.4
Medtr4g114643 Medicago truncatula HOM05D002931 ORTHO05D003273 2.2e-61 240.7 243 58.4
QL02p087842 Quercus lobata HOM05D002931 ORTHO05D003273 2.8e-61 240.4 383 42.8
CiPaw.03G242100 Carya illinoinensis HOM05D002931 ORTHO05D003273 2.5e-57 227.3 388 41.2
TAR625G1122 Trochodendron aralioides HOM05D002931 ORTHO05D003273 2.1e-48 197.6 384 40.1
Dinv36544 Davidia involucrata HOM05D002931 ORTHO05D003273 4.7e-48 196.4 413 37.3
Ciclev10007946m.g Citrus clementina HOM05D002931 ORTHO05D003273 1.0e-47 195.3 385 40.0
Atru.chr7.1207 Acer truncatum HOM05D002931 ORTHO05D003273 1.4e-47 194.9 368 39.7
Prupe.7G239900 Prunus persica HOM05D002931 ORTHO05D003273 1.4e-47 194.9 390 38.5
Manes.06G049800 Manihot esculenta HOM05D002931 ORTHO05D003273 2.0e-46 191.0 385 37.4
TAR636G1764 Trochodendron aralioides HOM05D002931 ORTHO05D003273 3.3e-46 190.3 387 38.8
Thecc.09G123400 Theobroma cacao HOM05D002931 ORTHO05D003273 4.1e-44 183.3 384 35.7
TWI34G0601 Tripterygium wilfordii HOM05D002931 ORTHO05D003273 1.7e-42 177.9 418 34.0
CSS0021369 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 2.0e-38 164.5 378 37.6
CSS0048152 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 2.6e-38 164.1 378 37.0
Duzib168G0426 Durio zibethinus HOM05D002931 ORTHO05D003273 2.6e-38 164.1 386 33.9
MD00G1107100 Malus domestica HOM05D002931 ORTHO05D003273 3.3e-38 163.7 358 34.4
RcHm_v2.0_Chr2g0089101 Rosa chinensis HOM05D002931 ORTHO05D003273 4.4e-38 163.3 384 35.7
CSS0026205 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 2.4e-36 157.5 380 34.2
Dinv41530 Davidia involucrata HOM05D002931 ORTHO05D003273 2.7e-35 154.1 250 41.2
Gohir.A13G199300 Gossypium hirsutum HOM05D002931 ORTHO05D003273 3.5e-35 153.7 360 32.8
MBI04_g07629_MAGBIO Magnolia biondii HOM05D002931 ORTHO05D003273 3.5e-35 153.7 411 34.5
Nn8g39392 Nelumbo nucifera HOM05D002931 ORTHO05D003273 4.5e-35 153.3 312 38.8
Actinidia26402 Actinidia chinensis HOM05D002931 ORTHO05D003273 5.0e-34 149.8 400 33.0
COL.COLO4_05773 Corchorus olitorius HOM05D002931 ORTHO05D003273 8.5e-34 149.1 394 31.5
Gohir.D13G204800 Gossypium hirsutum HOM05D002931 ORTHO05D003273 2.5e-33 147.5 363 32.5
Cc06_g08760 Coffea canephora HOM05D002931 ORTHO05D003273 1.6e-32 144.8 401 31.4
Cpa.g.sc75.56 Carica papaya HOM05D002931 ORTHO05D003273 4.7e-32 143.3 272 36.8
Gorai.013G233700 Gossypium raimondii HOM05D002931 ORTHO05D003273 4.7e-32 143.3 363 32.0
Rhsim03G0246600 Rhododendron simsii HOM05D002931 ORTHO05D003273 3.0e-31 140.6 380 33.9
FAN26G2146 Fragaria x ananassa HOM05D002931 ORTHO05D003273 2.6e-30 137.5 331 34.4
Actinidia07433 Actinidia chinensis HOM05D002931 ORTHO05D003273 2.7e-27 127.5 413 31.7
vmacro06178 Vaccinium macrocarpon HOM05D002931 ORTHO05D003273 1.9e-25 121.3 314 35.0
CAN.G377.6 Capsicum annuum HOM05D002931 ORTHO05D003273 2.8e-24 117.5 330 30.3
Duzib150G1215 Durio zibethinus HOM05D002931 ORTHO05D003273 8.9e-23 112.5 252 36.1
MELO3C026646.2 Cucumis melo HOM05D002931 ORTHO05D003273 1.2e-22 112.1 388 28.9
ClCG06G010940 Citrullus lanatus HOM05D002931 ORTHO05D003273 3.7e-21 107.1 394 28.9
Nitab4.5_0007260g0040 Nicotiana tabacum HOM05D002931 ORTHO05D003273 8.3e-21 105.9 337 28.5
Sopen12g002560 Solanum pennellii HOM05D002931 ORTHO05D003273 2.4e-20 104.4 377 29.2
Solyc12g006620.2 Solanum lycopersicum HOM05D002931 ORTHO05D003273 4.1e-20 103.6 359 30.1
PGSC0003DMG400020665 Solanum tuberosum HOM05D002931 ORTHO05D003273 7.0e-20 102.8 390 28.7
Peaxi162Scf00984g00118 Petunia axillaris HOM05D002931 ORTHO05D003273 2.7e-19 100.9 392 29.6
Nitab4.5_0003558g0040 Nicotiana tabacum HOM05D002931 ORTHO05D003273 1.0e-18 99.0 420 27.1
Nitab4.5_0001586g0140 Nicotiana tabacum HOM05D002931 ORTHO05D003273 2.3e-18 97.8 337 28.2
Aqoxy7G03732 Aquilegia oxysepala HOM05D002931 ORTHO05D003273 1.1e-17 95.5 410 28.5
Hund09142 Selenicereus undatus HOM05D002931 ORTHO05D003273 6.1e-16 89.7 382 27.5
ATR1156G042 Amborella trichopoda HOM05D002931 ORTHO05D003273 7.5e-14 82.8 453 28.5
PSO017G4344 Papaver somniferum HOM05D002931 ORTHO05D003273 3.7e-13 80.5 319 30.1
Sed0020732 Sechium edule HOM05D002931 ORTHO05D003273 2.4e-12 77.8 378 27.2
Eucgr.C01135 Eucalyptus grandis HOM05D002931 ORTHO05D003273 3.5e-11 73.9 326 27.0
Ah.14g080270 Amaranthus hybridus HOM05D002931 ORTHO05D003273 3.0e-10 70.9 281 27.0
FvH4_1g03572 Fragaria vesca HOM05D002931 ORTHO05D003273 3.6e-08 63.9 212 31.1
AUR62011091 Chenopodium quinoa HOM05D002931 ORTHO05D003273 4.0e-07 60.5 389 23.9
AUR62033480 Chenopodium quinoa HOM05D002931 ORTHO05D003273 8.9e-07 59.3 373 24.7
EL10Ac8g18619 Beta vulgaris HOM05D002931 ORTHO05D003273 9.8e-06 55.8 398 23.4


User provided reference genes

Program Settings