Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G161900 Phaseolus vulgaris HOM05D007576 ORTHO05D009576 0.0e+00 1424.1 746 100.0
VMungo1215G0476 Vigna mungo HOM05D007576 ORTHO05D009576 0.0e+00 1278.8 746 90.3
Glyma.05G009500 Glycine max HOM05D007576 ORTHO05D009576 0.0e+00 1215.3 748 85.7
Glyma.17G117500 Glycine max HOM05D007576 ORTHO05D009576 0.0e+00 1147.9 747 81.9
Lalb_Chr13g0302021 Lupinus albus HOM05D007576 ORTHO05D009576 1.5e-277 959.5 751 69.6
arahy.Tifrunner.gnm1.ann1.TJT9YV Arachis hypogaea HOM05D007576 ORTHO05D009576 1.3e-276 956.4 752 70.2
Lj4g0015142 Lotus japonicus HOM05D007576 ORTHO05D009576 1.3e-276 956.4 748 70.1
Ca_21702_v3 Cicer arietinum L. HOM05D007576 ORTHO05D009576 2.6e-274 948.7 753 70.0
arahy.Tifrunner.gnm1.ann1.TJX0PA Arachis hypogaea HOM05D007576 ORTHO05D009576 3.9e-270 934.9 718 71.3
Psat4g041840 Pisum sativum HOM05D007576 ORTHO05D009576 1.9e-264 916.0 754 67.9
Medtr4g113740 Medicago truncatula HOM05D007576 ORTHO05D009576 2.1e-263 912.5 753 67.1
Cfa000420 Carpinus fangiana HOM05D007576 ORTHO05D009576 3.8e-209 732.3 755 55.1
QL05p039732 Quercus lobata HOM05D007576 ORTHO05D009576 4.6e-202 708.8 757 53.6
CiPaw.09G057800 Carya illinoinensis HOM05D007576 ORTHO05D009576 3.7e-196 689.1 701 53.8
Potri.011G050600 Populus trichocarpa HOM05D007576 ORTHO05D009576 5.8e-189 665.2 764 51.8
Sabra11G0034500 Salix brachista HOM05D007576 ORTHO05D009576 6.0e-186 655.2 756 51.3
MD10G1296200 Malus domestica HOM05D007576 ORTHO05D009576 4.3e-184 649.0 755 51.1
Duzib192G1068 Durio zibethinus HOM05D007576 ORTHO05D009576 1.1e-179 634.4 694 52.2
MD05G1314800 Malus domestica HOM05D007576 ORTHO05D009576 4.1e-179 632.5 753 50.9
Thecc.06G190300 Theobroma cacao HOM05D007576 ORTHO05D009576 3.0e-177 626.3 694 52.0
RcHm_v2.0_Chr5g0008071 Rosa chinensis HOM05D007576 ORTHO05D009576 4.3e-176 622.5 733 51.0
TWI38G1553 Tripterygium wilfordii HOM05D007576 ORTHO05D009576 1.2e-175 620.9 741 49.7
Manes.17G043700 Manihot esculenta HOM05D007576 ORTHO05D009576 2.8e-175 619.8 755 49.4
FAN25G3788 Fragaria x ananassa HOM05D007576 ORTHO05D009576 8.1e-175 618.2 730 51.5
Dinv07540 Davidia involucrata HOM05D007576 ORTHO05D009576 2.4e-174 616.7 745 49.5
Ciclev10014397m.g Citrus clementina HOM05D007576 ORTHO05D009576 3.1e-174 616.3 720 50.1
FAN11G2000 Fragaria x ananassa HOM05D007576 ORTHO05D009576 5.2e-174 615.5 729 51.2
FAN21G0504 Fragaria x ananassa HOM05D007576 ORTHO05D009576 9.9e-173 611.3 730 51.0
FAN16G1901 Fragaria x ananassa HOM05D007576 ORTHO05D009576 1.7e-172 610.5 730 51.4
FvH4_3g04910 Fragaria vesca HOM05D007576 ORTHO05D009576 4.9e-172 609.0 727 51.0
Prupe.4G044400 Prunus persica HOM05D007576 ORTHO05D009576 1.2e-170 604.4 732 50.1
COL.COLO4_31497 Corchorus olitorius HOM05D007576 ORTHO05D009576 3.0e-169 599.7 703 50.6
CSS0005805 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 4.2e-163 579.3 750 46.7
Haze_06496 Corylus avellana HOM05D007576 ORTHO05D009576 4.6e-162 575.9 664 51.1
CANSAT35G0220 Cannabis sativa HOM05D007576 ORTHO05D009576 2.5e-160 570.1 766 47.3
CsaV3_6G050020 Cucumis sativus L. HOM05D007576 ORTHO05D009576 2.5e-160 570.1 688 47.2
MELO3C007295.2 Cucumis melo HOM05D007576 ORTHO05D009576 2.1e-159 567.0 687 46.6
Cpa.g.sc1598.2 Carica papaya HOM05D007576 ORTHO05D009576 6.2e-159 565.5 695 49.9
Gohir.A06G126300 Gossypium hirsutum HOM05D007576 ORTHO05D009576 1.1e-158 564.7 756 45.4
RhsimUnG0044800 Rhododendron simsii HOM05D007576 ORTHO05D009576 1.4e-158 564.3 737 45.7
Gorai.010G153000 Gossypium raimondii HOM05D007576 ORTHO05D009576 1.8e-158 563.9 756 45.4
Gohir.D06G131100 Gossypium hirsutum HOM05D007576 ORTHO05D009576 7.6e-157 558.5 756 45.1
ClCG01G022850 Citrullus lanatus HOM05D007576 ORTHO05D009576 2.7e-154 550.1 748 43.9
Sed0017500 Sechium edule HOM05D007576 ORTHO05D009576 6.0e-154 548.9 682 45.5
Eucgr.E03347 Eucalyptus grandis HOM05D007576 ORTHO05D009576 1.9e-152 543.9 725 47.2
Lj1A1207T83 Lonicera japonica HOM05D007576 ORTHO05D009576 2.1e-146 523.9 699 45.9
Nn1g06600 Nelumbo nucifera HOM05D007576 ORTHO05D009576 2.7e-146 523.5 763 44.2
TPR.G10703 Trifolium pratense HOM05D007576 ORTHO05D009576 4.6e-138 496.1 333 80.5
CAN.G1164.10 Capsicum annuum HOM05D007576 ORTHO05D009576 6.3e-135 485.7 698 44.0
Sopen02g023320 Solanum pennellii HOM05D007576 ORTHO05D009576 1.0e-132 478.4 721 42.4
PGSC0003DMG400022439 Solanum tuberosum HOM05D007576 ORTHO05D009576 1.0e-132 478.4 713 42.2
Nitab4.5_0001357g0010 Nicotiana tabacum HOM05D007576 ORTHO05D009576 7.2e-131 472.2 710 42.0
AUR62016989 Chenopodium quinoa HOM05D007576 ORTHO05D009576 9.4e-131 471.9 727 42.8
PGR042G0577 Punica granatum HOM05D007576 ORTHO05D009576 1.0e-129 468.4 758 42.2
Nitab4.5_0009493g0040 Nicotiana tabacum HOM05D007576 ORTHO05D009576 1.4e-129 468.0 710 41.8
Hund21235 Selenicereus undatus HOM05D007576 ORTHO05D009576 1.4e-129 468.0 719 41.4
AUR62014798 Chenopodium quinoa HOM05D007576 ORTHO05D009576 6.7e-129 465.7 722 42.9
MSTRG.15916 Avicennia marina HOM05D007576 ORTHO05D009576 5.7e-128 462.6 713 41.9
Sc05g0007790 Simmondsia chinensis HOM05D007576 ORTHO05D009576 4.8e-127 459.5 732 42.2
DCAR_008044 Daucus carota HOM05D007576 ORTHO05D009576 3.1e-126 456.8 689 43.5
Aqoxy1G02531 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 7.7e-125 452.2 749 39.8
Aqoxy1G02534 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 7.7e-125 452.2 749 39.8
EL10Ac8g20358 Beta vulgaris HOM05D007576 ORTHO05D009576 2.9e-124 450.3 744 41.0
PSO675G5421 Papaver somniferum HOM05D007576 ORTHO05D009576 3.8e-124 449.9 770 40.8
SalBow8G3709 Salvia bowleyana HOM05D007576 ORTHO05D009576 1.2e-122 444.9 703 40.1
Cc02_g13130 Coffea canephora HOM05D007576 ORTHO05D009576 6.7e-121 439.1 690 41.9
Migut.M01192 Erythranthe guttata HOM05D007576 ORTHO05D009576 6.7e-121 439.1 695 40.6
Ah.14g089350 Amaranthus hybridus HOM05D007576 ORTHO05D009576 7.4e-120 435.6 731 39.4
SGA_v2.0_scaffold7G03972 Striga asiatica HOM05D007576 ORTHO05D009576 8.2e-119 432.2 730 40.5
Lsat_1_v5_gn_4_52541 Lactuca sativa HOM05D007576 ORTHO05D009576 7.7e-117 425.6 687 41.3
HanXRQChr16g0518181 Helianthus annuus HOM05D007576 ORTHO05D009576 2.9e-116 423.7 694 40.9
MBI18_g17005_MAGBIO Magnolia biondii HOM05D007576 ORTHO05D009576 5.7e-112 409.5 787 37.7
ECA234G2395 Erigeron canadensis HOM05D007576 ORTHO05D009576 2.7e-109 400.6 728 39.6
Peaxi162Scf00947g00422 Petunia axillaris HOM05D007576 ORTHO05D009576 7.7e-109 399.1 593 42.0
Atru.chr10.1919 Acer truncatum HOM05D007576 ORTHO05D009576 1.5e-104 384.8 556 45.9
GSVIVG01002036001 Vitis vinifera HOM05D007576 ORTHO05D009576 1.4e-102 378.3 306 64.4
CSS0010553 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 1.4e-94 351.7 732 35.4
HPP92_014806 Vanilla planifolia HOM05D007576 ORTHO05D009576 2.9e-92 344.0 768 34.9
PSO541G6317 Papaver somniferum HOM05D007576 ORTHO05D009576 1.1e-91 342.0 399 51.4
Ciclev10008775m.g Citrus clementina HOM05D007576 ORTHO05D009576 2.4e-86 324.3 381 51.7
CDE01G0107 Ceratophyllum demersum HOM05D007576 ORTHO05D009576 2.5e-83 314.3 623 35.8
ATR0680G038 Amborella trichopoda HOM05D007576 ORTHO05D009576 2.1e-82 311.2 398 47.0
Oeu038219.1 Olea europaea HOM05D007576 ORTHO05D009576 6.8e-81 306.2 241 63.9
Os06g0731700 Oryza sativa ssp. japonica HOM05D007576 ORTHO05D009576 1.3e-79 302.0 336 50.9
Zm00001eb229030 Zea mays HOM05D007576 ORTHO05D009576 1.4e-78 298.5 265 58.9
Lj2g0021670 Lotus japonicus HOM05D007576 ORTHO05D009576 2.5e-67 261.2 202 69.3
Pp3c11_25570 Physcomitrium patens HOM05D007576 ORTHO05D009576 3.8e-55 220.7 257 47.1
Mapoly0181s0007 Marchantia polymorpha HOM05D007576 ORTHO05D009576 4.2e-54 217.2 358 38.8
Duzib235G0673 Durio zibethinus HOM05D007576 ORTHO05D009576 2.8e-42 177.9 155 59.4
Ciclev10009735m.g Citrus clementina HOM05D007576 ORTHO05D009576 3.7e-42 177.6 157 61.1
Atru.chr10.1928 Acer truncatum HOM05D007576 ORTHO05D009576 6.7e-36 156.8 328 35.7
Solyc02g078470.4 Solanum lycopersicum HOM05D007576 ORTHO05D009576 3.8e-31 141.0 97 68.0
CBR_g49326 Chara braunii HOM05D007576 ORTHO05D000002 7.4e-27 126.7 187 42.2
SEGI_32076 Sequoiadendron giganteum HOM05D007576 ORTHO05D009576 2.6e-16 91.7 83 51.8
ECA247G2871 Erigeron canadensis HOM05D000526 ORTHO05D000956 2.9e-15 88.2 80 53.8
MELO3C003884.2 Cucumis melo HOM05D007576 ORTHO05D009576 1.4e-12 79.3 156 34.6
Cre13.g589167 Chlamydomonas reinhardtii HOM05D007576 ORTHO05D009576 5.7e-11 73.9 231 28.1
Atru.chr10.1920 Acer truncatum HOM05D007576 ORTHO05D009576 3.4e-08 64.7 107 43.9
MELO3C029166.2 Cucumis melo HOM05D005813 ORTHO05D009576 2.9e-07 61.6 122 33.6


User provided reference genes

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