Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 4.8e-57 224.2 106 100.0
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 8.0e-52 206.8 104 90.4
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 1.4e-51 206.1 104 90.4
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 6.8e-51 203.8 106 90.6
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 7.5e-50 200.3 104 89.4
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 8.8e-43 176.8 101 78.2
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 4.4e-42 174.5 101 78.2
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 5.7e-42 174.1 103 74.8
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 5.7e-42 174.1 103 74.8
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 1.1e-40 169.9 101 72.3
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 1.4e-40 169.5 92 78.3
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 1.4e-40 169.5 101 72.3
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 3.5e-39 164.9 101 69.3
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 4.5e-39 164.5 103 69.9
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 4.5e-39 164.5 103 69.9
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 5.9e-39 164.1 101 70.3
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 3.8e-38 161.4 103 68.9
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 3.8e-38 161.4 103 68.9
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 6.6e-38 160.6 101 69.3
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 6.6e-38 160.6 101 69.3
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 6.6e-38 160.6 92 77.2
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.1e-37 159.8 106 67.0
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 1.1e-37 159.8 101 70.3
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 1.5e-37 159.5 101 68.3
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.5e-37 159.5 101 68.3
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 1.9e-37 159.1 103 67.0
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 1.9e-37 159.1 103 67.0
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 5.6e-37 157.5 103 67.0
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 7.3e-37 157.1 101 65.3
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 7.3e-37 157.1 101 67.3
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 4.7e-36 154.5 100 67.0
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 6.1e-36 154.1 94 70.2
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 6.1e-36 154.1 101 62.4
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 8.0e-36 153.7 94 69.1
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.0e-35 153.3 101 64.4
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 2.3e-35 152.1 94 69.1
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 2.3e-35 152.1 103 62.1
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 4.0e-35 151.4 101 64.4
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 5.2e-35 151.0 96 64.6
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 6.8e-35 150.6 101 65.3
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.2e-34 149.8 103 63.1
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 5.7e-34 147.5 94 67.0
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 2.2e-33 145.6 106 59.4
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 2.9e-33 145.2 101 65.3
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 3.7e-33 144.8 105 59.0
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 6.4e-33 144.1 98 68.4
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 6.4e-33 144.1 98 68.4
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.4e-32 142.9 104 58.7
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 2.4e-32 142.1 102 58.8
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 2.4e-32 142.1 102 58.8
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 4.1e-32 141.4 100 58.0
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 7.0e-32 140.6 106 57.5
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 7.0e-32 140.6 103 58.3
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 9.2e-32 140.2 104 58.7
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.2e-31 139.8 88 70.5
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 1.6e-31 139.4 100 61.0
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 3.5e-31 138.3 101 60.4
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 4.6e-31 137.9 100 58.0
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 4.6e-31 137.9 106 57.5
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 5.9e-31 137.5 83 69.9
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 1.3e-30 136.3 69 76.8
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 1.7e-30 136.0 104 55.8
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 2.3e-30 135.6 103 56.3
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 3.9e-30 134.8 90 61.1
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 6.6e-30 134.0 94 61.7
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 6.6e-30 134.0 91 64.8
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 3.3e-29 131.7 103 53.4
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 3.3e-29 131.7 120 54.2
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 5.6e-29 131.0 104 56.7
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 1.2e-28 129.8 80 68.8
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 3.6e-28 128.3 106 52.8
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 3.6e-28 128.3 106 52.8
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 4.7e-28 127.9 111 50.5
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 4.7e-28 127.9 111 50.5
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 4.7e-28 127.9 100 54.0
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 4.7e-28 127.9 85 63.5
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 8.0e-28 127.1 103 54.4
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 1.0e-27 126.7 103 54.4
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 1.0e-27 126.7 81 67.9
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 1.0e-27 126.7 97 57.7
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 2.3e-27 125.6 101 53.5
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 5.2e-27 124.4 102 51.0
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 4.4e-26 121.3 62 71.0
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 4.9e-25 117.9 98 53.1
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 6.4e-25 117.5 93 53.8
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 1.1e-24 116.7 100 53.0
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 1.1e-24 116.7 102 52.9
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.4e-24 116.3 77 62.3
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 4.1e-24 114.8 86 55.8
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 5.4e-24 114.4 100 53.0
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 2.0e-23 112.5 102 45.1
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 4.6e-23 111.3 65 64.6
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 6.0e-23 110.9 100 51.0
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 1.0e-22 110.2 100 51.0
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 1.3e-22 109.8 91 51.6
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 3.0e-22 108.6 93 46.2
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 3.3e-21 105.1 95 48.4
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 9.5e-21 103.6 104 49.0
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 1.6e-20 102.8 92 51.1
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 2.8e-20 102.1 97 48.5
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 1.8e-19 99.4 89 51.7
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 5.2e-19 97.8 89 53.9
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.2e-18 96.7 50 72.0
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 4.9e-17 91.3 88 50.0
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 6.4e-17 90.9 113 40.7
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 7.1e-16 87.4 51 64.7
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 1.2e-15 86.7 119 38.7
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 7.8e-15 84.0 44 70.5
MCO14G029 Micromonas commoda HOM05D007077 ORTHO05D008853 8.9e-11 70.5 105 35.2
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 5.8e-10 67.8 91 37.4
QL03p062338 Quercus lobata HOM05D007077 ORTHO05D008853 6.4e-09 64.3 54 63.0


User provided reference genes

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