Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G157300 Phaseolus vulgaris HOM05D005260 ORTHO05D006390 4.7e-205 717.6 360 100.0
Glyma.02G202400 Glycine max HOM05D005260 ORTHO05D006390 1.9e-177 625.9 363 86.0
VMungo1215G1942 Vigna mungo HOM05D005260 ORTHO05D006390 1.3e-175 619.8 360 87.5
Glyma.17G075400 Glycine max HOM05D005260 ORTHO05D006390 3.5e-168 595.1 366 81.7
Psat4g008640 Pisum sativum HOM05D005260 ORTHO05D006390 3.1e-156 555.4 366 76.8
Ca_21113_v3 Cicer arietinum L. HOM05D005260 ORTHO05D006390 1.6e-152 543.1 368 75.0
TPR.G9269 Trifolium pratense HOM05D005260 ORTHO05D006390 1.8e-151 539.7 370 75.4
Medtr4g131190 Medicago truncatula HOM05D005260 ORTHO05D006390 7.4e-150 534.3 357 75.6
Lj4g0015138 Lotus japonicus HOM05D005260 ORTHO05D006390 3.1e-140 502.3 363 72.7
Lalb_Chr13g0300941 Lupinus albus HOM05D005260 ORTHO05D006390 7.7e-139 497.7 382 71.7
QL02p092738 Quercus lobata HOM05D005260 ORTHO05D006390 9.4e-137 490.7 375 68.0
Haze_19232 Corylus avellana HOM05D005260 ORTHO05D006390 1.2e-131 473.8 370 67.8
Cfa020845 Carpinus fangiana HOM05D005260 ORTHO05D006390 1.7e-130 469.9 370 67.0
Manes.14G111500 Manihot esculenta HOM05D005260 ORTHO05D006390 1.5e-129 466.8 375 65.1
CiPaw.15G174600 Carya illinoinensis HOM05D005260 ORTHO05D006390 1.9e-129 466.5 380 66.1
Potri.018G109800 Populus trichocarpa HOM05D005260 ORTHO05D006390 4.2e-129 465.3 378 66.4
CSS0012073 Camellia sinensis var. sinensis HOM05D005260 ORTHO05D006390 5.5e-129 464.9 381 64.6
Prupe.7G260500 Prunus persica HOM05D005260 ORTHO05D006390 7.2e-129 464.5 382 64.4
Eucgr.C02595 Eucalyptus grandis HOM05D005260 ORTHO05D006390 2.1e-128 463.0 373 65.1
FAN19G1826 Fragaria x ananassa HOM05D005260 ORTHO05D006390 2.7e-128 462.6 372 65.6
Hma1.2p1_0028F.1_g017400 Hydrangea macrophylla HOM05D005260 ORTHO05D006390 4.7e-128 461.8 378 64.3
FAN23G1120 Fragaria x ananassa HOM05D005260 ORTHO05D006390 1.4e-127 460.3 372 65.3
Potri.006G186900 Populus trichocarpa HOM05D005260 ORTHO05D006390 1.4e-127 460.3 379 66.0
TAR625G1225 Trochodendron aralioides HOM05D005260 ORTHO05D006390 8.8e-127 457.6 376 65.4
FAN26G1108 Fragaria x ananassa HOM05D005260 ORTHO05D006390 2.0e-126 456.4 368 65.2
Cc06_g15200 Coffea canephora HOM05D005260 ORTHO05D006390 4.4e-126 455.3 380 63.9
MD15G1155100 Malus domestica HOM05D005260 ORTHO05D006390 5.7e-126 454.9 381 63.0
FAN28G1391 Fragaria x ananassa HOM05D005260 ORTHO05D006390 2.4e-124 449.5 368 64.1
RcHm_v2.0_Chr2g0085941 Rosa chinensis HOM05D005260 ORTHO05D006390 5.4e-124 448.4 378 63.5
FvH4_1g01150 Fragaria vesca HOM05D005260 ORTHO05D006390 2.0e-123 446.4 374 63.6
Rhsim01G0045600 Rhododendron simsii HOM05D005260 ORTHO05D006390 2.0e-123 446.4 390 62.1
Sabra06G0142800 Salix brachista HOM05D005260 ORTHO05D006390 2.0e-123 446.4 370 64.3
Sabra18G0092700 Salix brachista HOM05D005260 ORTHO05D006390 5.9e-123 444.9 379 63.9
TAR383G0874 Trochodendron aralioides HOM05D005260 ORTHO05D006390 5.9e-123 444.9 377 62.6
Ciclev10008691m.g Citrus clementina HOM05D005260 ORTHO05D006390 7.7e-123 444.5 369 63.4
Rhsim01G0035700 Rhododendron simsii HOM05D005260 ORTHO05D006390 1.0e-122 444.1 384 62.2
Rhsim01G0036000 Rhododendron simsii HOM05D005260 ORTHO05D006390 8.5e-122 441.0 390 61.5
TWI34G1822 Tripterygium wilfordii HOM05D005260 ORTHO05D006390 1.1e-121 440.7 383 62.7
Sabra06G0141800 Salix brachista HOM05D005260 ORTHO05D006390 2.5e-121 439.5 371 63.6
RhsimUnG0040000 Rhododendron simsii HOM05D005260 ORTHO05D006390 9.4e-121 437.6 375 62.1
Gohir.A13G184700 Gossypium hirsutum HOM05D005260 ORTHO05D006390 3.6e-120 435.6 367 64.3
Sc18g0000130 Simmondsia chinensis HOM05D005260 ORTHO05D006390 4.7e-120 435.3 384 60.4
Duzib168G1964 Durio zibethinus HOM05D005260 ORTHO05D006390 3.0e-119 432.6 367 63.2
Gorai.013G217000 Gossypium raimondii HOM05D005260 ORTHO05D006390 3.0e-119 432.6 367 63.8
Thecc.09G033300 Theobroma cacao HOM05D005260 ORTHO05D006390 4.0e-119 432.2 367 63.2
MELO3C010238.2 Cucumis melo HOM05D005260 ORTHO05D006390 8.8e-119 431.0 387 60.2
Gohir.D13G191100 Gossypium hirsutum HOM05D005260 ORTHO05D006390 8.8e-119 431.0 366 63.7
CsaV3_1G028770 Cucumis sativus L. HOM05D005260 ORTHO05D006390 2.0e-118 429.9 390 60.5
Peaxi162Scf00347g00088 Petunia axillaris HOM05D005260 ORTHO05D006390 2.0e-118 429.9 391 59.3
Sopen07g001450 Solanum pennellii HOM05D005260 ORTHO05D006390 2.6e-118 429.5 389 58.9
ClCG06G015480 Citrullus lanatus HOM05D005260 ORTHO05D006390 3.4e-118 429.1 386 61.1
Nitab4.5_0008157g0020 Nicotiana tabacum HOM05D005260 ORTHO05D006390 3.4e-118 429.1 395 58.5
Solyc07g005340.2 Solanum lycopersicum HOM05D005260 ORTHO05D006390 7.5e-118 427.9 389 59.1
PGSC0003DMG400003180 Solanum tuberosum HOM05D005260 ORTHO05D006390 7.5e-118 427.9 389 59.1
Nitab4.5_0001201g0060 Nicotiana tabacum HOM05D005260 ORTHO05D006390 3.7e-117 425.6 376 59.6
Lsat_1_v5_gn_6_38260 Lactuca sativa HOM05D005260 ORTHO05D006390 6.3e-117 424.9 373 60.1
CAN.G1116.9 Capsicum annuum HOM05D005260 ORTHO05D006390 8.3e-117 424.5 394 58.9
SGA_v2.0_scaffold265G46122 Striga asiatica HOM05D005260 ORTHO05D006390 8.3e-117 424.5 371 62.0
Duzib150G0891 Durio zibethinus HOM05D005260 ORTHO05D006390 3.1e-116 422.5 367 61.9
PGR102G1636 Punica granatum HOM05D005260 ORTHO05D006390 3.1e-116 422.5 371 61.2
Sed0012515 Sechium edule HOM05D005260 ORTHO05D006390 5.4e-116 421.8 383 61.1
GSVIVG01023592001 Vitis vinifera HOM05D005260 ORTHO05D006390 2.1e-112 409.8 360 61.9
Atru.chr7.58 Acer truncatum HOM05D005260 ORTHO05D006390 1.0e-111 407.5 354 62.4
Atru.chr6.1391 Acer truncatum HOM05D005260 ORTHO05D006390 4.0e-111 405.6 354 62.1
Actinidia04287 Actinidia chinensis HOM05D005260 ORTHO05D006390 4.0e-111 405.6 353 60.9
MSTRG.6120 Avicennia marina HOM05D005260 ORTHO05D006390 4.0e-111 405.6 373 59.5
Gorai.006G273400 Gossypium raimondii HOM05D005260 ORTHO05D006390 5.2e-111 405.2 354 63.0
Oeu051690.1 Olea europaea HOM05D005260 ORTHO05D006390 2.0e-110 403.3 375 59.2
Cpa.g.sc46.130 Carica papaya HOM05D005260 ORTHO05D006390 1.7e-109 400.2 382 58.6
ECA233G0390 Erigeron canadensis HOM05D005260 ORTHO05D006390 1.7e-109 400.2 343 64.4
Migut.J01331 Erythranthe guttata HOM05D005260 ORTHO05D006390 8.3e-109 397.9 371 58.5
Oeu050475.1 Olea europaea HOM05D005260 ORTHO05D006390 8.3e-109 397.9 374 59.1
PSO170G6608 Papaver somniferum HOM05D005260 ORTHO05D006390 1.8e-108 396.7 395 57.2
Lj7P455T24 Lonicera japonica HOM05D005260 ORTHO05D006390 4.1e-108 395.6 339 61.1
PSO017G5909 Papaver somniferum HOM05D005260 ORTHO05D006390 4.1e-108 395.6 396 58.1
HanXRQChr13g0397631 Helianthus annuus HOM05D005260 ORTHO05D006390 7.0e-108 394.8 384 57.8
BraA10t43614Z Brassica rapa HOM05D005260 ORTHO05D006390 1.2e-107 394.0 371 57.1
BolC2t07483H Brassica oleracea HOM05D005260 ORTHO05D006390 2.0e-107 393.3 372 59.4
A10p16150 Brassica napus HOM05D005260 ORTHO05D006390 3.5e-107 392.5 371 58.2
BolC9t57839H Brassica oleracea HOM05D005260 ORTHO05D006390 3.5e-107 392.5 371 58.2
C09p49880 Brassica napus HOM05D005260 ORTHO05D006390 1.3e-106 390.6 371 58.0
A02p08050 Brassica napus HOM05D005260 ORTHO05D006390 2.3e-106 389.8 373 58.7
BcaC04g19916 Brassica carinata HOM05D005260 ORTHO05D006390 2.9e-106 389.4 371 57.7
BcaB05g22395 Brassica carinata HOM05D005260 ORTHO05D006390 5.0e-106 388.7 364 59.1
SalBow1G8640 Salvia bowleyana HOM05D005260 ORTHO05D006390 1.5e-105 387.1 372 56.2
BraA02t05877Z Brassica rapa HOM05D005260 ORTHO05D006390 3.3e-105 386.0 373 58.7
SHI04751 Sapria himalayana HOM05D005260 ORTHO05D006390 4.3e-105 385.6 375 54.9
ATR0739G050 Amborella trichopoda HOM05D005260 ORTHO05D006390 5.6e-105 385.2 390 55.4
Thhalv10013961m.g Eutrema salsugineum HOM05D005260 ORTHO05D006390 7.3e-105 384.8 332 62.7
AT5G58020 Arabidopsis thaliana HOM05D005260 ORTHO05D006390 9.5e-105 384.4 370 58.1
AL8G34120 Arabidopsis lyrata HOM05D005260 ORTHO05D006390 4.7e-104 382.1 372 57.8
Carub.0008s1857 Capsella rubella HOM05D005260 ORTHO05D006390 6.1e-104 381.7 376 56.9
CARHR271830 Cardamine hirsuta HOM05D005260 ORTHO05D006390 1.0e-103 380.9 378 56.9
C02p13690 Brassica napus HOM05D005260 ORTHO05D006390 1.5e-102 377.1 373 57.4
Sp6g19700 Schrenkiella parvula HOM05D005260 ORTHO05D006390 2.6e-102 376.3 370 57.3
THA.LOC104817828 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 3.7e-101 372.5 369 56.9
COL.COLO4_18779 Corchorus olitorius HOM05D005260 ORTHO05D006390 2.4e-100 369.8 365 57.5
Aa31LG3G13860 Aethionema arabicum HOM05D005260 ORTHO05D006390 3.5e-99 365.9 369 55.3
MBI14_g37102_MAGBIO Magnolia biondii HOM05D005260 ORTHO05D006390 7.8e-99 364.8 383 55.1
Ah.11g045050 Amaranthus hybridus HOM05D005260 ORTHO05D006390 8.6e-98 361.3 371 54.7
THA.LOC104817826 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 5.6e-97 358.6 367 55.3
DCAR_020883 Daucus carota HOM05D005260 ORTHO05D006390 1.4e-95 354.0 272 66.5
Aqoxy3G00834 Aquilegia oxysepala HOM05D005260 ORTHO05D006390 3.1e-95 352.8 372 56.2
EL10Ac8g18850 Beta vulgaris HOM05D005260 ORTHO05D006390 3.1e-95 352.8 391 51.7
SGA_v2.0_scaffold45G17044 Striga asiatica HOM05D005260 ORTHO05D006390 5.2e-95 352.1 366 55.5
Os06g0183900 Oryza sativa ssp. japonica HOM05D005260 ORTHO05D006390 3.7e-93 345.9 323 58.2
Pp3c14_10930 Physcomitrium patens HOM05D005260 ORTHO05D006390 6.4e-93 345.1 384 50.8
CiPaw.16G114800 Carya illinoinensis HOM05D005260 ORTHO05D006390 2.3e-90 336.7 283 63.6
Dinv42879 Davidia involucrata HOM05D005260 ORTHO05D006390 1.4e-87 327.4 344 56.4
Dinv43221 Davidia involucrata HOM05D005260 ORTHO05D006390 1.4e-87 327.4 344 56.4
SEGI_13576 Sequoiadendron giganteum HOM05D005260 ORTHO05D006390 3.1e-87 326.2 379 50.1
AagrBONN_evm.TU.Sc2ySwM_228.4055 Anthoceros agrestis HOM05D005260 ORTHO05D006390 8.4e-85 318.2 305 57.4
Gohir.D09G249000 Gossypium hirsutum HOM05D005260 ORTHO05D006390 1.9e-84 317.0 280 62.1
Mapoly0043s0023 Marchantia polymorpha HOM05D005260 ORTHO05D006390 3.9e-82 309.3 371 49.6
AUR62031434 Chenopodium quinoa HOM05D005260 ORTHO05D006390 2.8e-80 303.1 311 53.7
SMO307G0072 Selaginella moellendorffii HOM05D005260 ORTHO05D006390 1.4e-79 300.8 318 53.1
AUR62021106 Chenopodium quinoa HOM05D005260 ORTHO05D006390 2.8e-72 276.6 247 57.1
CBR_g44540 Chara braunii HOM05D005260 ORTHO05D006390 6.4e-69 265.4 389 41.9
Actinidia38337 Actinidia chinensis HOM05D005260 ORTHO05D006390 2.5e-65 253.4 169 69.8
Gohir.D07G030400 Gossypium hirsutum HOM05D005260 ORTHO05D006390 8.1e-64 248.4 283 51.2
Gorai.001G031600 Gossypium raimondii HOM05D005260 ORTHO05D006390 1.8e-63 247.3 283 50.9
Lalb_Chr12g0198621 Lupinus albus HOM05D005260 ORTHO05D006390 7.4e-57 225.3 199 64.8
unitig_0.g2819 Utricularia gibba HOM05D005260 ORTHO05D006390 3.2e-52 209.9 215 52.6
HPP92_018747 Vanilla planifolia HOM05D005260 ORTHO05D006390 9.6e-49 198.4 199 56.8
CDE02G0414 Ceratophyllum demersum HOM05D005260 ORTHO05D006390 5.0e-45 186.0 349 39.8
Cre03.g150650 Chlamydomonas reinhardtii HOM05D005260 ORTHO05D006390 2.0e-38 164.1 335 34.6
TAR625G0635 Trochodendron aralioides HOM05D005260 ORTHO05D006390 4.6e-35 152.9 141 61.7
AagrBONN_evm.TU.Sc2ySwM_344.4069 Anthoceros agrestis HOM05D005260 ORTHO05D006390 1.3e-32 144.8 175 51.4
PRCOL_00003864 Prasinoderma coloniale HOM05D005260 ORTHO05D006390 4.8e-32 142.9 282 35.5
HPP92_018748 Vanilla planifolia HOM05D005260 ORTHO05D006390 5.9e-30 136.0 130 54.6
HanXRQChr09g0262911 Helianthus annuus HOM05D005260 ORTHO05D006390 2.2e-29 134.0 82 73.2
Atru.chr13.1961 Acer truncatum HOM05D005260 ORTHO05D006390 1.2e-27 128.3 166 49.4
MELO3C004727.2 Cucumis melo HOM05D005260 ORTHO05D006390 2.1e-27 127.5 83 73.5
ATR0579G027 Amborella trichopoda HOM05D005260 ORTHO05D006390 8.0e-19 99.0 94 54.3
Zm00001eb158280 Zea mays HOM05D005260 ORTHO05D006390 9.1e-15 85.5 89 49.4
MCO05G557 Micromonas commoda HOM05D005260 ORTHO05D006390 1.5e-12 78.2 266 26.7
ClCG06G012260 Citrullus lanatus HOM05D005260 ORTHO05D006390 6.1e-11 72.8 54 66.7
CiPaw.12G098000 Carya illinoinensis HOM05D003547 ORTHO05D004236 1.8e-10 71.2 79 51.9
BolC3t13905H Brassica oleracea HOM05D005260 ORTHO05D006390 5.7e-09 66.2 46 71.7
unitig_747.g21900 Utricularia gibba HOM05D005260 ORTHO05D006390 1.3e-08 65.1 79 45.6
Gorai.011G083100 Gossypium raimondii HOM05D005260 ORTHO05D006390 3.7e-08 63.5 68 54.4
Cfa026666 Carpinus fangiana HOM05D005260 ORTHO05D006390 8.3e-08 62.4 290 26.6
CBR_g37538 Chara braunii HOM05D005260 ORTHO05D006390 7.0e-07 59.3 247 23.1


User provided reference genes

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