Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 1.2e-171 606.3 283 100.0
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 6.7e-154 547.4 275 93.5
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 9.6e-153 543.5 275 93.1
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 3.7e-152 541.6 275 92.4
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 4.2e-148 528.1 280 86.8
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 6.7e-146 520.8 280 85.7
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 1.5e-145 519.6 275 86.5
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 1.9e-145 519.2 280 85.4
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.9e-145 519.2 280 85.4
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 4.3e-145 518.1 279 85.3
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 4.3e-145 518.1 271 87.1
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 1.3e-144 516.5 274 86.5
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 2.8e-144 515.4 274 86.9
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 2.8e-144 515.4 276 87.0
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 2.8e-144 515.4 278 84.9
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.1e-143 513.5 275 86.2
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 1.1e-143 513.5 271 86.0
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.1e-143 513.5 274 85.8
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 6.9e-143 510.8 282 84.0
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 6.9e-143 510.8 275 86.5
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 3.4e-142 508.4 272 86.8
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 3.4e-142 508.4 276 85.1
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 5.8e-142 507.7 273 85.7
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 3.8e-141 505.0 269 86.6
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 8.4e-141 503.8 280 81.8
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 8.4e-141 503.8 280 82.9
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 1.4e-140 503.1 275 87.6
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 4.2e-140 501.5 271 86.0
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 7.1e-140 500.7 280 81.1
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 1.6e-139 499.6 277 83.0
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 4.6e-139 498.0 275 87.6
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 7.9e-139 497.3 269 85.9
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 1.3e-138 496.5 281 81.9
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 1.3e-138 496.5 269 85.9
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 1.3e-138 496.5 280 81.1
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 1.8e-138 496.1 277 82.7
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 5.1e-138 494.6 281 82.2
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 6.7e-138 494.2 281 81.9
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 1.9e-137 492.7 280 80.7
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 1.9e-137 492.7 280 81.8
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 4.3e-137 491.5 275 82.9
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 5.7e-137 491.1 277 82.3
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 9.7e-137 490.3 275 86.2
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 1.3e-136 490.0 269 82.5
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 3.7e-136 488.4 268 84.3
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 4.8e-136 488.0 281 81.1
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 4.8e-136 488.0 279 81.0
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 8.2e-136 487.3 280 79.6
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 1.1e-135 486.9 275 81.1
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 2.4e-135 485.7 273 83.2
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 3.1e-135 485.3 274 80.7
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 2.0e-134 482.6 280 80.0
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 4.5e-134 481.5 274 79.6
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 7.6e-134 480.7 280 80.4
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 7.6e-134 480.7 265 86.8
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 9.3e-132 473.8 275 80.7
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 3.6e-131 471.9 280 78.6
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 1.8e-130 469.5 272 81.2
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 1.8e-130 469.5 272 81.2
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 1.8e-130 469.5 272 81.2
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 1.8e-130 469.5 272 81.2
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 1.8e-130 469.5 272 81.2
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 1.8e-130 469.5 267 81.6
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 1.9e-129 466.1 257 82.9
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 4.3e-129 464.9 260 82.7
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 5.7e-129 464.5 275 79.6
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 3.7e-128 461.8 280 76.4
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 6.3e-128 461.1 281 76.5
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.4e-127 459.9 264 80.3
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 3.9e-122 441.8 273 77.7
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 5.1e-122 441.4 257 79.4
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 1.3e-120 436.8 326 66.0
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 1.7e-120 436.4 280 74.6
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 2.2e-117 426.0 232 84.9
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 2.1e-115 419.5 269 74.0
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 9.4e-108 394.0 275 69.1
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 1.5e-105 386.7 291 64.6
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 2.0e-105 386.3 271 63.1
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 3.5e-102 375.6 278 65.5
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 1.3e-101 373.6 277 65.7
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.5e-97 360.1 188 88.3
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 3.4e-97 359.0 182 89.0
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 1.0e-93 347.4 265 65.7
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 2.1e-91 339.7 168 93.5
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 2.8e-91 339.3 168 93.5
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 3.4e-89 332.4 168 92.3
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 1.7e-88 330.1 185 81.6
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 2.8e-88 329.3 168 89.3
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 1.8e-87 326.6 165 89.7
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 7.8e-86 321.2 170 86.5
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.0e-85 320.9 168 87.5
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 2.3e-85 319.7 168 86.9
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 1.5e-84 317.0 168 84.5
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 1.9e-84 316.6 161 88.8
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 5.6e-84 315.1 165 85.5
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 1.6e-83 313.5 168 84.5
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 2.8e-83 312.8 160 89.4
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.0e-82 310.8 168 83.3
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 5.2e-82 308.5 164 86.0
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 1.5e-76 290.4 185 74.6
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 1.9e-71 273.5 144 87.5
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 1.2e-70 270.8 226 54.9
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.9e-68 263.5 157 80.3
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 7.1e-55 218.4 122 79.5
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 2.8e-51 206.5 110 84.5
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.2e-46 191.0 102 80.4
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 3.8e-40 169.5 87 89.7
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 3.8e-40 169.5 87 89.7
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 1.9e-39 167.2 87 88.5
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 6.0e-38 162.2 254 39.4
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 8.7e-37 158.3 91 79.1
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 7.4e-36 155.2 92 78.3
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 8.1e-35 151.8 91 73.6
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 5.3e-34 149.1 87 80.5
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 6.9e-34 148.7 75 88.0
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 9.0e-34 148.3 92 75.0
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 2.0e-33 147.1 92 71.7
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 2.0e-33 147.1 92 71.7
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 3.4e-33 146.4 68 98.5
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 3.4e-33 146.4 92 72.8
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 1.3e-32 144.4 92 71.7
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 1.7e-32 144.1 93 68.8
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 6.4e-32 142.1 87 77.0
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 1.0e-29 134.8 71 85.9
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 3.9e-29 132.9 77 77.9
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 1.5e-28 131.0 81 76.5
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.6e-27 127.5 66 89.4
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 6.9e-18 95.5 68 67.6
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 2.1e-14 84.0 59 64.4
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 1.7e-11 74.3 34 91.2


User provided reference genes

Program Settings