Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 6.8e-70 267.3 144 100.0
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 3.0e-62 241.9 149 91.3
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 3.0e-54 215.3 146 82.9
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 8.6e-49 197.2 137 80.3
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 2.1e-47 192.6 141 75.9
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 3.9e-41 171.8 150 70.0
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 1.6e-39 166.4 138 72.5
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 2.8e-39 165.6 143 70.6
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 6.2e-39 164.5 143 70.6
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 2.3e-38 162.5 138 73.9
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 4.0e-38 161.8 134 72.4
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 8.9e-38 160.6 132 73.5
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 8.9e-38 160.6 134 70.9
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 1.2e-37 160.2 142 69.0
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 1.5e-37 159.8 150 66.0
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 2.0e-37 159.5 149 68.5
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 2.6e-37 159.1 137 67.9
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 3.4e-37 158.7 137 67.2
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 3.4e-37 158.7 134 71.6
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 5.8e-37 157.9 132 68.9
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 2.2e-36 156.0 137 71.5
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 2.2e-36 156.0 145 67.6
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 3.7e-36 155.2 112 77.7
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 6.4e-36 154.5 146 67.1
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 8.3e-36 154.1 134 71.6
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.1e-35 153.7 133 69.9
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 1.4e-35 153.3 149 64.4
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 1.4e-35 153.3 147 65.3
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 1.9e-35 152.9 125 72.8
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 1.9e-35 152.9 131 67.9
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 3.2e-35 152.1 145 66.9
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 4.1e-35 151.8 146 63.7
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 9.2e-35 150.6 144 66.7
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.2e-34 150.2 145 66.9
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 1.6e-34 149.8 139 67.6
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 1.6e-34 149.8 144 64.6
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.6e-34 149.8 129 70.5
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.7e-34 149.1 145 66.9
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.7e-34 149.1 145 66.9
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 4.6e-34 148.3 127 69.3
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 4.6e-34 148.3 150 64.7
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 4.6e-34 148.3 139 67.6
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 4.6e-34 148.3 155 60.6
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 4.6e-34 148.3 137 67.2
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 7.8e-34 147.5 129 67.4
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 1.7e-33 146.4 143 62.2
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 1.7e-33 146.4 145 60.7
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 1.7e-33 146.4 143 62.2
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 3.0e-33 145.6 136 66.2
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 3.0e-33 145.6 142 60.6
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 3.0e-33 145.6 142 60.6
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 8.6e-33 144.1 142 60.6
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 1.1e-32 143.7 145 60.0
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 1.1e-32 143.7 149 63.8
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 1.5e-32 143.3 139 66.2
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 1.5e-32 143.3 91 81.3
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 1.9e-32 142.9 142 60.6
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 1.9e-32 142.9 142 60.6
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 1.9e-32 142.9 142 59.9
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 4.3e-32 141.7 148 64.2
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 5.6e-32 141.4 139 64.0
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 7.3e-32 141.0 118 69.5
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 1.2e-31 140.2 110 72.7
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.6e-31 139.8 123 68.3
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.6e-31 139.8 122 64.8
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 2.1e-31 139.4 122 64.8
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 3.6e-31 138.7 110 70.9
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 3.6e-31 138.7 141 59.6
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 6.2e-31 137.9 126 65.9
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 8.1e-31 137.5 115 72.2
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 8.1e-31 137.5 122 63.9
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 1.1e-30 137.1 142 60.6
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 1.1e-30 137.1 115 69.6
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 1.1e-30 137.1 146 60.3
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 1.8e-30 136.3 144 59.7
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 2.4e-30 136.0 144 62.5
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 3.1e-30 135.6 142 59.9
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 4.0e-30 135.2 122 63.1
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 5.2e-30 134.8 114 70.2
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 5.2e-30 134.8 122 63.1
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 8.9e-30 134.0 122 63.1
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 1.2e-29 133.7 138 60.9
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 1.2e-29 133.7 141 60.3
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 1.2e-29 133.7 114 67.5
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 2.0e-29 132.9 114 66.7
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 2.0e-29 132.9 129 65.9
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 2.0e-29 132.9 140 59.3
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 4.4e-29 131.7 118 68.6
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 4.4e-29 131.7 153 58.8
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 4.4e-29 131.7 149 55.7
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 7.6e-29 131.0 113 68.1
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 7.6e-29 131.0 111 71.2
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 2.2e-28 129.4 93 77.4
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 2.9e-28 129.0 70 94.3
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 4.9e-28 128.3 149 56.4
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 8.4e-28 127.5 70 92.9
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.1e-27 127.1 143 59.4
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 1.4e-27 126.7 110 68.2
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 1.4e-27 126.7 136 61.0
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 1.4e-27 126.7 138 57.2
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 1.9e-27 126.3 107 66.4
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 2.4e-27 125.9 141 56.0
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 7.1e-27 124.4 133 61.7
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 2.7e-26 122.5 121 64.5
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 3.6e-23 112.1 121 62.8
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 1.2e-21 107.1 114 64.0
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 9.9e-21 104.0 145 48.3
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 8.4e-20 100.9 78 67.9
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.9e-19 99.8 137 49.6
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 7.1e-19 97.8 204 38.2
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.2e-18 97.1 119 55.5
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 1.2e-18 97.1 118 58.5
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 3.5e-18 95.5 67 70.1
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 4.6e-18 95.1 80 66.2
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 1.7e-17 93.2 128 57.8
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 6.6e-17 91.3 99 56.6
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 6.6e-17 91.3 84 63.1
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 2.8e-15 85.9 137 42.3
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 7.1e-11 71.2 61 63.9
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 3.0e-09 65.9 98 51.0
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 6.7e-09 64.7 100 50.0
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 8.7e-09 64.3 61 59.0
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 7.4e-08 61.2 48 75.0
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 1.6e-07 60.1 67 50.7
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 1.8e-06 56.6 118 33.9


User provided reference genes

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