Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 2.9e-84 315.1 148 100.0
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 2.4e-78 295.4 148 94.6
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 4.2e-67 258.1 149 82.6
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 7.2e-59 230.7 146 74.0
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 1.8e-57 226.1 148 72.3
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 9.7e-56 220.3 147 70.1
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 3.8e-52 208.4 139 68.3
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 5.5e-51 204.5 140 66.4
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 3.6e-50 201.8 140 65.7
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 1.3e-47 193.4 138 62.3
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 5.4e-46 188.0 136 62.5
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 2.7e-45 185.7 134 66.4
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 7.7e-45 184.1 148 58.8
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 1.0e-44 183.7 133 62.4
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 1.3e-44 183.3 134 60.4
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 1.7e-44 183.0 139 59.7
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 3.8e-44 181.8 138 59.4
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 1.5e-43 179.9 136 61.0
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 9.5e-43 177.2 154 55.8
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 2.1e-42 176.0 134 61.2
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 2.1e-42 176.0 150 54.7
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 4.7e-42 174.9 140 57.9
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 4.7e-42 174.9 139 57.6
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 1.0e-41 173.7 148 55.4
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 1.0e-41 173.7 139 56.8
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 2.3e-41 172.6 154 53.2
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 4.0e-41 171.8 139 56.8
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 4.0e-41 171.8 143 58.7
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 5.2e-41 171.4 124 62.1
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 5.2e-41 171.4 142 55.6
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 6.8e-41 171.0 155 52.9
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 6.8e-41 171.0 138 56.5
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 8.9e-41 170.6 136 58.1
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 1.2e-40 170.2 139 59.7
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 1.2e-40 170.2 131 58.0
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 1.2e-40 170.2 131 58.0
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 1.2e-40 170.2 157 51.0
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 1.5e-40 169.9 152 55.3
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 2.0e-40 169.5 124 61.3
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 2.0e-40 169.5 151 53.6
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 2.6e-40 169.1 154 51.9
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 4.4e-40 168.3 137 57.7
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 5.7e-40 167.9 135 57.8
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 5.7e-40 167.9 134 56.0
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 7.5e-40 167.5 134 56.7
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 7.5e-40 167.5 141 55.3
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 9.8e-40 167.2 131 57.3
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 9.8e-40 167.2 139 55.4
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 1.3e-39 166.8 123 58.5
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 1.3e-39 166.8 136 55.9
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 3.7e-39 165.2 139 54.7
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 4.9e-39 164.9 124 59.7
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 6.3e-39 164.5 139 55.4
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 6.3e-39 164.5 151 53.0
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 6.3e-39 164.5 141 56.7
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 6.3e-39 164.5 138 55.1
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 8.3e-39 164.1 134 56.7
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 1.1e-38 163.7 139 53.2
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 1.1e-38 163.7 134 57.5
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 1.1e-38 163.7 133 56.4
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 1.4e-38 163.3 125 57.6
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.4e-38 163.3 150 52.7
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 1.4e-38 163.3 134 57.5
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 2.4e-38 162.5 152 50.7
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 4.1e-38 161.8 139 54.7
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 4.1e-38 161.8 137 53.3
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 9.2e-38 160.6 139 51.8
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 9.2e-38 160.6 139 54.7
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 9.2e-38 160.6 134 54.5
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 2.0e-37 159.5 135 52.6
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.0e-37 159.5 123 59.3
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 2.7e-37 159.1 139 52.5
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 2.7e-37 159.1 153 49.7
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 2.7e-37 159.1 149 49.0
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 3.5e-37 158.7 135 52.6
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 7.8e-37 157.5 135 51.9
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 7.8e-37 157.5 123 57.7
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 1.0e-36 157.1 149 48.3
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 1.0e-36 157.1 135 51.9
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.0e-36 157.1 153 50.3
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 1.0e-36 157.1 122 58.2
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 1.3e-36 156.8 135 51.9
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 1.3e-36 156.8 135 51.9
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 1.7e-36 156.4 135 51.9
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 5.0e-36 154.8 136 53.7
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 6.6e-36 154.5 149 48.3
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 1.5e-35 153.3 124 57.3
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 6.1e-34 147.9 158 48.1
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 3.0e-33 145.6 139 49.6
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 3.0e-33 145.6 155 46.5
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 1.2e-32 143.7 144 50.7
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 3.4e-32 142.1 156 46.8
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 1.3e-31 140.2 124 50.0
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 5.4e-30 134.8 109 57.8
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 3.6e-26 122.1 105 55.2
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 8.0e-26 120.9 123 45.5
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 1.4e-25 120.2 115 48.7
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 1.8e-25 119.8 136 47.1
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 6.8e-25 117.9 146 43.2
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 4.4e-24 115.2 144 43.1
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 9.8e-24 114.0 134 44.8
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 1.7e-23 113.2 158 37.3
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 2.2e-23 112.8 88 60.2
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 2.9e-23 112.5 109 49.5
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 7.8e-21 104.4 131 38.9
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 8.6e-20 100.9 84 54.8
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 4.0e-17 92.0 146 36.3
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 5.2e-17 91.7 139 39.6
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 6.8e-17 91.3 62 64.5
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 4.4e-16 88.6 98 42.9
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 2.9e-15 85.9 65 58.5
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 3.2e-14 82.4 197 26.9
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 2.1e-13 79.7 72 58.3
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 1.9e-11 73.2 58 55.2
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 1.4e-09 67.0 115 36.5
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 3.1e-09 65.9 120 33.3
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 1.5e-08 63.5 80 43.8
Cfa010446 Carpinus fangiana HOM05D006750 ORTHO05D008426 6.4e-07 58.2 48 54.2


User provided reference genes

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