Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 6.2e-202 707.2 349 100.0
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 1.1e-187 659.8 349 92.3
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 4.3e-171 604.7 349 84.2
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 3.1e-169 598.6 348 83.9
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 2.1e-165 585.9 353 79.3
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 8.2e-162 573.9 355 79.4
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 1.5e-160 569.7 344 80.5
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 2.6e-160 568.9 355 78.0
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 1.0e-159 567.0 355 78.0
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 1.0e-156 557.0 352 76.7
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 1.3e-135 486.9 347 69.5
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 1.3e-135 486.9 347 69.5
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 7.2e-134 481.1 346 69.1
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 3.0e-132 475.7 349 70.2
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 8.8e-132 474.2 350 66.6
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.6e-131 472.6 345 68.7
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 4.4e-131 471.9 348 67.5
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.8e-130 468.4 345 67.5
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.7e-127 459.9 347 67.1
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 3.2e-126 455.7 346 67.1
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 3.2e-126 455.7 348 68.1
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 9.5e-126 454.1 347 66.3
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 1.6e-125 453.4 347 66.0
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 2.8e-125 452.6 348 64.7
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 3.6e-125 452.2 348 66.4
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 8.0e-125 451.1 348 67.5
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 8.0e-125 451.1 347 65.4
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.4e-124 450.3 349 64.8
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 8.8e-124 447.6 373 62.5
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.5e-123 446.8 347 64.3
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 5.7e-123 444.9 347 64.3
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.8e-122 442.6 333 67.0
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 8.3e-122 441.0 349 64.2
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.1e-121 440.7 347 63.7
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 2.0e-120 436.4 350 63.1
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 3.5e-120 435.6 354 64.1
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 3.5e-120 435.6 355 64.5
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 3.5e-120 435.6 355 64.5
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.0e-119 434.1 355 63.7
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 2.9e-119 432.6 364 61.3
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 2.9e-119 432.6 353 62.0
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 1.5e-118 430.3 355 62.8
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 2.5e-118 429.5 355 61.4
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 3.3e-118 429.1 357 62.2
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 3.3e-118 429.1 357 62.2
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 5.2e-116 421.8 353 61.8
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 1.4e-113 413.7 343 63.8
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 1.8e-113 413.3 353 58.6
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.4e-113 412.9 345 62.6
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 2.0e-112 409.8 347 60.5
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 1.0e-111 407.5 349 60.5
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 1.7e-111 406.8 349 60.2
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 2.3e-111 406.4 352 59.1
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 3.0e-111 406.0 348 58.6
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 3.9e-111 405.6 351 59.8
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 1.5e-110 403.7 353 59.8
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 3.3e-110 402.5 351 59.5
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.5e-110 401.0 345 60.6
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 1.2e-109 400.6 373 56.0
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 2.1e-109 399.8 358 57.3
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 2.1e-109 399.8 333 62.5
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 2.8e-109 399.4 352 58.5
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 4.7e-109 398.7 354 59.6
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 6.2e-109 398.3 349 59.0
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 3.4e-107 392.5 358 57.5
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 4.4e-107 392.1 352 56.5
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 1.3e-106 390.6 351 58.7
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 1.3e-106 390.6 351 58.4
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 1.3e-106 390.6 358 57.0
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 2.2e-106 389.8 360 57.2
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 2.9e-106 389.4 359 57.4
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 3.7e-106 389.0 356 57.3
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 4.9e-106 388.7 357 57.4
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 6.4e-106 388.3 358 56.7
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 8.3e-106 387.9 348 56.9
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 1.9e-105 386.7 353 58.4
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 2.4e-105 386.3 353 55.8
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 9.2e-105 384.4 347 57.9
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 1.2e-104 384.0 330 59.7
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 3.5e-104 382.5 369 56.9
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 7.8e-104 381.3 355 57.2
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 2.3e-103 379.8 360 55.6
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 8.6e-103 377.9 362 56.1
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 3.3e-102 375.9 326 58.0
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 3.3e-102 375.9 359 56.5
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 1.6e-101 373.6 345 54.2
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 7.5e-99 364.8 334 58.4
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 9.9e-99 364.4 334 58.4
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 2.2e-98 363.2 334 58.1
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 6.4e-98 361.7 331 58.9
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 1.6e-93 347.1 360 54.4
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 8.1e-93 344.7 336 55.1
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 8.1e-93 344.7 356 53.9
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 1.5e-91 340.5 237 70.9
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 2.8e-85 319.7 266 60.2
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 2.6e-83 313.2 351 49.0
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 9.9e-83 311.2 238 63.9
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 1.0e-79 301.2 353 49.6
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 6.6e-79 298.5 223 65.5
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 1.8e-71 273.9 354 43.2
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 6.2e-69 265.4 274 51.1
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 2.2e-66 256.9 167 73.1
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 2.1e-61 240.4 200 60.5
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.4e-60 237.7 200 61.5
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.3e-60 235.7 200 61.5
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.2e-59 234.6 200 61.0
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 6.5e-58 228.8 306 44.1
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 5.5e-57 225.7 371 36.9
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 7.1e-57 225.3 204 54.9
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 5.9e-51 205.7 150 69.3
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 5.9e-51 205.7 200 57.5
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 4.3e-46 189.5 382 32.5
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 8.5e-42 175.3 232 44.0
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.2e-41 173.3 122 69.7
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 7.2e-41 172.2 141 56.7
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.7e-34 151.0 199 43.7
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 9.4e-33 145.2 168 42.9
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.2e-23 112.8 63 82.5
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.3e-21 105.9 63 76.2
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.2e-17 93.2 63 71.4
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 2.4e-12 77.4 52 65.4
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 2.0e-11 74.3 53 62.3
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 2.0e-11 74.3 53 62.3
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 2.0e-11 74.3 53 62.3
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 1.0e-10 72.0 52 61.5
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 1.3e-10 71.6 174 29.3
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 3.8e-10 70.1 82 40.2
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 6.5e-10 69.3 156 31.4
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 4.0e-07 60.1 49 57.1
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 4.0e-07 60.1 49 57.1
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 4.0e-07 60.1 49 57.1
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 4.0e-07 60.1 49 57.1


User provided reference genes

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