Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G145300 Phaseolus vulgaris HOM05D004327 ORTHO05D005032 2.7e-203 711.8 379 100.0
VMungo1215G1888 Vigna mungo HOM05D004327 ORTHO05D005032 4.5e-198 694.5 379 97.1
Glyma.17G062900 Glycine max HOM05D004327 ORTHO05D005032 1.5e-193 679.5 379 94.5
Glyma.13G096600 Glycine max HOM05D004327 ORTHO05D005032 2.1e-187 659.1 369 94.0
arahy.Tifrunner.gnm1.ann1.UF0NDT Arachis hypogaea HOM05D004327 ORTHO05D005032 7.7e-182 640.6 378 91.5
arahy.Tifrunner.gnm1.ann1.IHC8NS Arachis hypogaea HOM05D004327 ORTHO05D005032 8.5e-181 637.1 378 91.0
Lj4g0017259 Lotus japonicus HOM05D004327 ORTHO05D005032 8.5e-181 637.1 376 91.0
Lalb_Chr07g0180501 Lupinus albus HOM05D004327 ORTHO05D005032 8.0e-179 630.6 372 90.1
Medtr4g127970 Medicago truncatula HOM05D004327 ORTHO05D005032 3.1e-175 618.6 368 89.4
Atru.chr7.613 Acer truncatum HOM05D004327 ORTHO05D005032 1.3e-173 613.2 378 87.6
TPR.G5449 Trifolium pratense HOM05D004327 ORTHO05D005032 6.6e-173 610.9 379 87.1
CsaV3_2G008420 Cucumis sativus L. HOM05D004327 ORTHO05D005032 2.8e-171 605.5 378 84.4
Prupe.1G085300 Prunus persica HOM05D004327 ORTHO05D005032 6.1e-171 604.4 389 83.8
Cpa.g.sc233.7 Carica papaya HOM05D004327 ORTHO05D005032 8.0e-171 604.0 366 88.8
Manes.14G154300 Manihot esculenta HOM05D004327 ORTHO05D005032 1.0e-170 603.6 376 85.4
MD16G1257500 Malus domestica HOM05D004327 ORTHO05D005032 5.2e-170 601.3 379 84.7
QL02p097831 Quercus lobata HOM05D004327 ORTHO05D005032 1.2e-169 600.1 374 85.6
GSVIVG01029211001 Vitis vinifera HOM05D004327 ORTHO05D005032 4.4e-169 598.2 374 86.4
Ca_21229_v3 Cicer arietinum L. HOM05D004327 ORTHO05D005032 9.8e-169 597.0 364 88.2
MD13G1253000 Malus domestica HOM05D004327 ORTHO05D005032 9.8e-169 597.0 390 83.1
Thecc.09G176900 Theobroma cacao HOM05D004327 ORTHO05D005032 4.9e-168 594.7 376 84.8
CiPaw.07G192500 Carya illinoinensis HOM05D004327 ORTHO05D005032 3.2e-167 592.0 380 83.7
CANSAT11G1121 Cannabis sativa HOM05D004327 ORTHO05D005032 5.4e-167 591.3 389 81.5
ClCG11G012140 Citrullus lanatus HOM05D004327 ORTHO05D005032 1.2e-166 590.1 384 82.3
Gohir.D08G093800 Gossypium hirsutum HOM05D004327 ORTHO05D005032 3.5e-166 588.6 376 84.0
Potri.018G092000 Populus trichocarpa HOM05D004327 ORTHO05D005032 4.6e-166 588.2 376 84.6
Gohir.A08G084200 Gossypium hirsutum HOM05D004327 ORTHO05D005032 1.0e-165 587.0 376 83.8
Dinv42719 Davidia involucrata HOM05D004327 ORTHO05D005032 1.3e-165 586.6 386 81.9
Dinv43382 Davidia involucrata HOM05D004327 ORTHO05D005032 1.3e-165 586.6 372 83.9
Psat4g169000 Pisum sativum HOM05D004327 ORTHO05D005032 1.7e-165 586.3 350 89.1
Gorai.004G099500 Gossypium raimondii HOM05D004327 ORTHO05D005032 5.0e-165 584.7 385 82.1
CSS0007595 Camellia sinensis var. sinensis HOM05D004327 ORTHO05D005032 3.3e-164 582.0 386 82.4
COL.COLO4_37716 Corchorus olitorius HOM05D004327 ORTHO05D005032 3.3e-164 582.0 373 84.5
RcHm_v2.0_Chr4g0402371 Rosa chinensis HOM05D004327 ORTHO05D005032 3.3e-164 582.0 380 82.6
Hma1.2p1_1025F.1_g249340 Hydrangea macrophylla HOM05D004327 ORTHO05D005032 2.1e-163 579.3 384 81.5
Duzib168G0099 Durio zibethinus HOM05D004327 ORTHO05D005032 8.0e-163 577.4 378 82.5
Sed0007507 Sechium edule HOM05D004327 ORTHO05D005032 8.0e-163 577.4 388 79.6
Eucgr.C00153 Eucalyptus grandis HOM05D004327 ORTHO05D005032 1.1e-162 577.0 359 86.1
Duzib150G0132 Durio zibethinus HOM05D004327 ORTHO05D005032 4.0e-162 575.1 376 82.2
Ciclev10008675m.g Citrus clementina HOM05D004327 ORTHO05D005032 2.0e-161 572.8 374 82.4
TAR343G0001 Trochodendron aralioides HOM05D004327 ORTHO05D005032 2.2e-160 569.3 386 79.8
vmacro06012 Vaccinium macrocarpon HOM05D004327 ORTHO05D005032 1.6e-158 563.1 354 84.2
AL8G33390 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 1.0e-157 560.5 376 79.8
AT5G57410 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 1.2e-155 553.5 378 79.1
Cc06_g13210 Coffea canephora HOM05D004327 ORTHO05D005032 6.2e-155 551.2 365 82.2
Carub.0008s1793 Capsella rubella HOM05D004327 ORTHO05D005032 1.4e-154 550.1 376 78.2
CARHR271210 Cardamine hirsuta HOM05D004327 ORTHO05D005032 1.8e-154 549.7 376 78.2
Sp6g19130 Schrenkiella parvula HOM05D004327 ORTHO05D005032 2.3e-154 549.3 376 79.3
MSTRG.26218 Avicennia marina HOM05D004327 ORTHO05D005032 4.0e-154 548.5 380 77.9
PGR142G4100 Punica granatum HOM05D004327 ORTHO05D005032 4.0e-154 548.5 372 80.4
Nn8g40460 Nelumbo nucifera HOM05D004327 ORTHO05D005032 6.8e-154 547.7 386 77.2
DCAR_017971 Daucus carota HOM05D004327 ORTHO05D005032 1.2e-153 547.0 344 84.0
Sabra18G0079100 Salix brachista HOM05D004327 ORTHO05D005032 1.5e-153 546.6 374 80.7
FAN22G1646 Fragaria x ananassa HOM05D004327 ORTHO05D005032 5.8e-153 544.7 390 77.2
Rhsim03G0264600 Rhododendron simsii HOM05D004327 ORTHO05D005032 9.9e-153 543.9 366 80.1
Migut.K00240 Erythranthe guttata HOM05D004327 ORTHO05D005032 2.9e-152 542.3 366 79.0
FvH4_4g08170 Fragaria vesca HOM05D004327 ORTHO05D005032 4.9e-152 541.6 389 76.9
Thhalv10013843m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 1.1e-151 540.4 370 79.7
PSO063G6085 Papaver somniferum HOM05D004327 ORTHO05D005032 5.4e-151 538.1 389 75.3
BolC3t13942H Brassica oleracea HOM05D004327 ORTHO05D005032 2.1e-150 536.2 363 79.6
THA.LOC104811786 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 2.1e-150 536.2 366 79.8
BraA03t10592Z Brassica rapa HOM05D004327 ORTHO05D005032 3.5e-150 535.4 363 79.6
ECA240G0157 Erigeron canadensis HOM05D004327 ORTHO05D005032 7.8e-150 534.3 366 79.8
MSTRG.6222 Avicennia marina HOM05D004327 ORTHO05D005032 1.3e-149 533.5 367 79.0
HanXRQChr11g0322421 Helianthus annuus HOM05D004327 ORTHO05D005032 2.3e-149 532.7 380 77.9
AL3G53050 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 3.0e-149 532.3 366 79.0
THA.LOC104813521 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 3.9e-149 531.9 410 73.9
Migut.J01485 Erythranthe guttata HOM05D004327 ORTHO05D005032 1.2e-147 526.9 344 82.0
PSO170G3199 Papaver somniferum HOM05D004327 ORTHO05D005032 1.2e-147 526.9 389 74.3
Lalb_Chr13g0300201 Lupinus albus HOM05D004327 ORTHO05D005032 3.6e-147 525.4 355 81.4
BcaB01g04457 Brassica carinata HOM05D004327 ORTHO05D005032 6.2e-147 524.6 345 81.4
BcaC01g06496 Brassica carinata HOM05D004327 ORTHO05D005032 4.0e-146 521.9 369 77.0
Solyc07g019530.3 Solanum lycopersicum HOM05D004327 ORTHO05D005032 4.0e-146 521.9 367 76.6
Sopen07g008040 Solanum pennellii HOM05D004327 ORTHO05D005032 4.0e-146 521.9 367 76.6
C03p15000 Brassica napus HOM05D004327 ORTHO05D005032 6.8e-146 521.2 342 81.6
A03p12840 Brassica napus HOM05D004327 ORTHO05D005032 1.2e-145 520.4 342 81.6
Aa31LG3G13300 Aethionema arabicum HOM05D004327 ORTHO05D005032 1.5e-145 520.0 416 70.4
CDE04G3746 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 1.5e-145 520.0 367 75.5
Peaxi162Scf00231g00726 Petunia axillaris HOM05D004327 ORTHO05D005032 1.5e-145 520.0 368 76.6
CARHR109440 Cardamine hirsuta HOM05D004327 ORTHO05D005032 2.6e-145 519.2 372 76.6
Sc14g0001280 Simmondsia chinensis HOM05D004327 ORTHO05D005032 4.4e-145 518.5 351 80.1
CAN.G210.1 Capsicum annuum HOM05D004327 ORTHO05D005032 5.8e-145 518.1 354 78.5
ATR0580G352 Amborella trichopoda HOM05D004327 ORTHO05D005032 6.4e-144 514.6 384 73.2
SGA_v2.0_scaffold66G22446 Striga asiatica HOM05D004327 ORTHO05D005032 8.4e-144 514.2 386 74.1
Actinidia17317 Actinidia chinensis HOM05D004327 ORTHO05D005032 2.7e-142 509.2 383 75.2
BolC9t54328H Brassica oleracea HOM05D004327 ORTHO05D005032 4.6e-142 508.4 350 79.4
ECA236G3505 Erigeron canadensis HOM05D004327 ORTHO05D005032 1.3e-141 506.9 358 75.7
Thhalv10022742m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 1.5e-140 503.4 371 76.3
Carub.0003s3311 Capsella rubella HOM05D004327 ORTHO05D005032 3.3e-140 502.3 367 75.7
SalBow6G1961 Salvia bowleyana HOM05D004327 ORTHO05D005032 4.3e-140 501.9 367 74.7
MBI14_g17374_MAGBIO Magnolia biondii HOM05D004327 ORTHO05D005032 1.2e-139 500.4 367 73.6
Sp3g32340 Schrenkiella parvula HOM05D004327 ORTHO05D005032 2.1e-139 499.6 371 75.5
Sed0007415 Sechium edule HOM05D004327 ORTHO05D005032 3.1e-138 495.7 386 71.5
Hund09030 Selenicereus undatus HOM05D004327 ORTHO05D005032 5.2e-138 495.0 369 73.2
THA.LOC104803493 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 2.0e-137 493.0 360 76.4
CiPaw.08G036000 Carya illinoinensis HOM05D004327 ORTHO05D005032 3.4e-137 492.3 363 74.9
CDE07G0842 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 5.8e-137 491.5 352 75.0
Dinv41244 Davidia involucrata HOM05D004327 ORTHO05D005032 7.6e-137 491.1 319 85.3
HPP92_019412 Vanilla planifolia HOM05D004327 ORTHO05D005032 7.6e-137 491.1 355 74.4
A09p12090 Brassica napus HOM05D004327 ORTHO05D005032 9.9e-137 490.7 363 75.8
Lsat_1_v5_gn_7_54620 Lactuca sativa HOM05D004327 ORTHO05D005032 2.9e-136 489.2 330 81.2
Aqoxy7G03046 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 3.8e-136 488.8 350 75.7
Zm00001eb178290 Zea mays HOM05D004327 ORTHO05D005032 3.8e-136 488.8 367 74.9
BraA09t36853Z Brassica rapa HOM05D004327 ORTHO05D005032 8.4e-136 487.6 350 76.9
EL10Ac8g18287 Beta vulgaris HOM05D004327 ORTHO05D005032 5.4e-135 485.0 373 70.8
BcaB07g31641 Brassica carinata HOM05D004327 ORTHO05D005032 2.7e-134 482.6 350 76.3
BcaC04g22882 Brassica carinata HOM05D004327 ORTHO05D005032 2.7e-134 482.6 350 76.3
C09p14270 Brassica napus HOM05D004327 ORTHO05D005032 2.7e-134 482.6 350 76.3
SHI02909 Sapria himalayana HOM05D004327 ORTHO05D005032 2.3e-133 479.6 364 72.5
Aa31LG8G15970 Aethionema arabicum HOM05D004327 ORTHO05D005032 3.0e-133 479.2 366 73.5
Os08g0242900 Oryza sativa ssp. japonica HOM05D004327 ORTHO05D005032 3.9e-133 478.8 354 75.1
AUR62033220 Chenopodium quinoa HOM05D004327 ORTHO05D005032 2.8e-131 472.6 356 73.0
unitig_0.g2679 Utricularia gibba HOM05D004327 ORTHO05D005032 1.8e-130 469.9 352 73.6
AagrBONN_evm.TU.Sc2ySwM_117.785 Anthoceros agrestis HOM05D004327 ORTHO05D005032 2.3e-125 453.0 366 66.4
SMO352G0043 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 3.3e-124 449.1 353 69.4
MELO3C004022.2 Cucumis melo HOM05D004327 ORTHO05D005032 2.1e-123 446.4 297 83.2
Pp3c12_10100 Physcomitrium patens HOM05D004327 ORTHO05D005032 5.3e-122 441.8 345 67.8
AUR62021302 Chenopodium quinoa HOM05D004327 ORTHO05D005032 4.5e-121 438.7 354 70.1
Nitab4.5_0004572g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 9.3e-119 431.0 379 66.0
Pp3c5_23860 Physcomitrium patens HOM05D004327 ORTHO05D005032 4.6e-118 428.7 341 65.7
FAN17G0468 Fragaria x ananassa HOM05D004327 ORTHO05D005032 7.9e-118 427.9 318 72.6
Lj9A24G29 Lonicera japonica HOM05D004327 ORTHO05D005032 2.5e-116 422.9 267 84.3
Pp3c3_22200 Physcomitrium patens HOM05D004327 ORTHO05D005032 5.8e-113 411.8 358 63.1
TAR636G3612 Trochodendron aralioides HOM05D000809 ORTHO05D001196 1.7e-112 410.2 283 80.9
Actinidia38633 Actinidia chinensis HOM05D004327 ORTHO05D005032 3.8e-112 409.1 286 77.3
Nitab4.5_0005945g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 1.1e-111 407.5 367 63.8
Pp3c10_16450 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.8e-109 400.2 307 67.8
AT2G18876 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 5.7e-108 395.2 275 80.0
SMO137G0257 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 2.2e-107 393.3 331 65.0
Haze_22092 Corylus avellana HOM05D004327 ORTHO05D005032 5.3e-106 388.7 267 79.4
Mapoly0023s0050 Marchantia polymorpha HOM05D004327 ORTHO05D005032 2.0e-105 386.7 352 60.2
Actinidia27011 Actinidia chinensis HOM05D004327 ORTHO05D005032 5.0e-104 382.1 305 71.8
CBR_g34541 Chara braunii HOM05D004327 ORTHO05D005032 3.2e-103 379.4 346 59.2
Pp3c16_10790 Physcomitrium patens HOM05D004327 ORTHO05D005032 6.1e-102 375.2 369 56.4
Duzib170G0255 Durio zibethinus HOM05D004327 ORTHO05D005032 4.8e-99 365.5 218 90.4
BcaB01g04461 Brassica carinata HOM05D004327 ORTHO05D005032 6.5e-96 355.1 286 68.5
CBR_g4121 Chara braunii HOM05D004327 ORTHO05D005032 2.8e-91 339.7 352 53.7
Actinidia02748 Actinidia chinensis HOM05D004327 ORTHO05D005032 1.6e-86 323.9 224 81.2
BcaC01g06490 Brassica carinata HOM05D004327 ORTHO05D005032 8.8e-69 265.0 172 82.6
Aqoxy4G01695 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 5.4e-50 202.6 125 87.2
BcaC01g06489 Brassica carinata HOM05D004327 ORTHO05D005032 1.7e-48 197.6 142 72.5
Haze_22093 Corylus avellana HOM05D004327 ORTHO05D005032 1.4e-45 188.0 140 75.7
FAN17G0800 Fragaria x ananassa HOM05D004327 ORTHO05D005032 4.9e-43 179.5 142 73.9
Oeu042171.1 Olea europaea HOM05D004327 ORTHO05D005032 1.6e-41 174.5 119 79.0
Lj9A25T20 Lonicera japonica HOM05D004327 ORTHO05D005032 1.6e-30 137.9 97 76.3
SEGI_01506 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 6.2e-30 136.0 105 69.5
HanXRQChr09g0245491 Helianthus annuus HOM05D000502 ORTHO05D005032 9.9e-28 128.6 79 75.9
HanXRQChr08g0229701 Helianthus annuus HOM05D000502 ORTHO05D005032 1.7e-27 127.9 70 82.9
HanXRQChr13g0404041 Helianthus annuus HOM05D000502 ORTHO05D005032 2.4e-26 124.0 70 81.4
Pp3c26_7180 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.1e-25 120.9 117 50.4
SEGI_38031 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 4.6e-25 119.8 81 80.2
CiPaw.01G111100 Carya illinoinensis HOM05D002292 ORTHO05D005032 4.2e-18 96.7 76 77.6
Aqoxy7G03035 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 2.1e-17 94.4 130 48.5
BcaB05g22345 Brassica carinata HOM05D004327 ORTHO05D005032 2.1e-17 94.4 92 57.6
BraA02t05921Z Brassica rapa HOM05D004327 ORTHO05D005032 3.5e-17 93.6 81 66.7
Glyma.09G140000 Glycine max HOM05D004327 ORTHO05D005032 3.3e-15 87.0 74 56.8
COL.COLO4_28287 Corchorus olitorius HOM05D004327 ORTHO05D005032 5.6e-15 86.3 53 90.6
Pp3c25_9090 Physcomitrium patens HOM05D004327 ORTHO05D005032 4.8e-14 83.2 97 54.6
BolC9t54329H Brassica oleracea HOM05D004327 ORTHO05D005032 4.0e-13 80.1 63 73.0
Oeu003512.1 Olea europaea HOM05D004327 ORTHO05D005032 2.6e-12 77.4 42 90.5
C02p14250 Brassica napus HOM05D004327 ORTHO05D032179 1.4e-10 71.6 101 51.5
PRCOL_00002192 Prasinoderma coloniale HOM05D004327 ORTHO05D005032 7.1e-10 69.3 249 26.5
MCO09G810 Micromonas commoda HOM05D004327 ORTHO05D005032 1.0e-08 65.5 163 28.2
BcaC03g14154 Brassica carinata HOM05D004327 ORTHO05D032179 5.1e-08 63.2 51 64.7
CiPaw.16G058000 Carya illinoinensis HOM05D002292 ORTHO05D003256 1.9e-07 61.2 56 69.6


User provided reference genes

Program Settings