Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G145250 Phaseolus vulgaris HOM05D007262 ORTHO05D008524 3.1e-93 345.1 174 100.0
VMungo1215G2644 Vigna mungo HOM05D007262 ORTHO05D008524 1.6e-78 296.2 174 85.6
Glyma.17G062800 Glycine max HOM05D007262 ORTHO05D008524 1.1e-66 256.9 180 80.0
Glyma.13G096700 Glycine max HOM05D007262 ORTHO05D008524 1.4e-66 256.5 182 79.7
Ca_21230_v3 Cicer arietinum L. HOM05D007262 ORTHO05D008524 2.9e-51 205.7 182 65.4
Medtr4g127960 Medicago truncatula HOM05D007262 ORTHO05D008524 2.6e-44 182.6 184 57.6
Lj4g0007156 Lotus japonicus HOM05D007262 ORTHO05D008524 5.9e-44 181.4 180 60.6
Lalb_Chr07g0180511 Lupinus albus HOM05D007262 ORTHO05D008524 1.2e-41 173.7 189 57.1
arahy.Tifrunner.gnm1.ann1.7KD434 Arachis hypogaea HOM05D007262 ORTHO05D008524 1.3e-30 137.1 186 52.7
Psat4g169040 Pisum sativum HOM05D007262 ORTHO05D008524 2.0e-28 129.8 155 54.2
Lalb_Chr12g0199441 Lupinus albus HOM05D007262 ORTHO05D008524 2.3e-27 126.3 152 50.7
CiPaw.08G035900 Carya illinoinensis HOM05D007262 ORTHO05D008524 6.1e-25 118.2 179 45.8
Potri.018G091900 Populus trichocarpa HOM05D007262 ORTHO05D008524 1.4e-24 117.1 190 40.0
RcHm_v2.0_Chr4g0402361 Rosa chinensis HOM05D007262 ORTHO05D008524 1.4e-24 117.1 186 44.6
Prupe.1G085200 Prunus persica HOM05D007262 ORTHO05D008524 8.9e-24 114.4 186 44.1
Sabra06G0129200 Salix brachista HOM05D007262 ORTHO05D008524 8.9e-24 114.4 178 41.0
Manes.14G154200 Manihot esculenta HOM05D007262 ORTHO05D008524 1.5e-23 113.6 196 41.3
Thecc.09G176800 Theobroma cacao HOM05D007262 ORTHO05D008524 2.0e-23 113.2 189 43.4
Cfa013501 Carpinus fangiana HOM05D007262 ORTHO05D008524 7.5e-23 111.3 179 41.3
Atru.chr7.612 Acer truncatum HOM05D007262 ORTHO05D008524 9.8e-23 110.9 180 40.6
MD13G1252900 Malus domestica HOM05D007262 ORTHO05D008524 2.8e-22 109.4 170 47.6
Potri.006G167300 Populus trichocarpa HOM05D007262 ORTHO05D008524 1.8e-21 106.7 89 60.7
Sabra18G0079000 Salix brachista HOM05D007262 ORTHO05D008524 1.8e-21 106.7 189 39.7
PGR044G1778 Punica granatum HOM05D007262 ORTHO05D008524 1.6e-20 103.6 199 38.7
Sed0015293 Sechium edule HOM05D007262 ORTHO05D008524 2.0e-20 103.2 167 44.3
Haze_22091 Corylus avellana HOM05D007262 ORTHO05D008524 3.5e-20 102.4 179 42.5
COL.COLO4_37717 Corchorus olitorius HOM05D007262 ORTHO05D008524 1.7e-19 100.1 184 40.2
Gohir.A13G212100 Gossypium hirsutum HOM05D007262 ORTHO05D008524 1.7e-19 100.1 176 44.3
Gohir.D13G216200 Gossypium hirsutum HOM05D007262 ORTHO05D008524 1.7e-19 100.1 173 45.7
Gorai.013G246500 Gossypium raimondii HOM05D007262 ORTHO05D008524 1.7e-19 100.1 172 45.9
CSS0001479 Camellia sinensis var. sinensis HOM05D007262 ORTHO05D008524 2.9e-19 99.4 137 51.1
Hma1.2p1_1025F.1_g249350 Hydrangea macrophylla HOM05D007262 ORTHO05D008524 2.9e-19 99.4 180 40.0
Hma1.2p1_0900F.1_g234550 Hydrangea macrophylla HOM05D007262 ORTHO05D008524 6.6e-19 98.2 174 40.8
CiPaw.07G192600 Carya illinoinensis HOM05D007262 ORTHO05D008524 8.6e-19 97.8 94 59.6
Ciclev10010707m.g Citrus clementina HOM05D007262 ORTHO05D008524 3.3e-18 95.9 90 58.9
MELO3C004021.2 Cucumis melo HOM05D007262 ORTHO05D008524 3.3e-18 95.9 97 54.6
MD16G1257400 Malus domestica HOM05D007262 ORTHO05D008524 3.3e-18 95.9 120 49.2
TWI34G1693 Tripterygium wilfordii HOM05D007262 ORTHO05D008524 9.5e-18 94.4 194 38.1
Nn8g40468 Nelumbo nucifera HOM05D007262 ORTHO05D008524 1.6e-17 93.6 194 38.1
ClCG11G012130 Citrullus lanatus HOM05D007262 ORTHO05D008524 4.7e-17 92.0 165 41.2
CsaV3_2G008430 Cucumis sativus L. HOM05D007262 ORTHO05D008524 1.8e-16 90.1 162 40.7
Dinv41243 Davidia involucrata HOM05D007262 ORTHO05D008524 6.8e-16 88.2 72 63.9
CANSAT11G0589 Cannabis sativa HOM05D007262 ORTHO05D008524 1.5e-15 87.0 71 64.8
Nitab4.5_0012916g0010 Nicotiana tabacum HOM05D007262 ORTHO05D008524 9.8e-15 84.3 139 44.6
TAR383G0997 Trochodendron aralioides HOM05D007262 ORTHO05D008524 3.7e-14 82.4 133 46.6
Sed0023592 Sechium edule HOM05D007262 ORTHO05D008524 4.1e-13 79.0 176 36.4
Nitab4.5_0007075g0010 Nicotiana tabacum HOM05D007262 ORTHO05D008524 5.4e-13 78.6 140 44.3
Peaxi162Scf00231g00727 Petunia axillaris HOM05D007262 ORTHO05D008524 7.0e-13 78.2 128 41.4
DCAR_009916 Daucus carota HOM05D007262 ORTHO05D008524 2.7e-12 76.3 90 52.2
Sc08g0005310 Simmondsia chinensis HOM05D007262 ORTHO05D008524 1.1e-10 70.9 144 40.3
THA.LOC104811785 Tarenaya hassleriana HOM05D007262 ORTHO05D008524 1.1e-10 70.9 186 36.0
CARHR233310 Cardamine hirsuta HOM05D007262 ORTHO05D008524 2.5e-10 69.7 78 51.3
Carub.0007s1510 Capsella rubella HOM05D007262 ORTHO05D008524 3.3e-10 69.3 82 52.4
Lsat_1_v5_gn_7_54640 Lactuca sativa HOM05D007262 ORTHO05D008524 3.3e-10 69.3 79 50.6
AL7G27180 Arabidopsis lyrata HOM05D007262 ORTHO05D008524 7.3e-10 68.2 86 48.8
AT4G25845 Arabidopsis thaliana HOM05D007262 ORTHO05D008524 7.3e-10 68.2 79 53.2
EL10Ac8g18288 Beta vulgaris HOM05D023972 ORTHO05D008524 7.3e-10 68.2 77 48.1
Lsat_1_v5_gn_8_67760 Lactuca sativa HOM05D007262 ORTHO05D008524 7.3e-10 68.2 88 51.1
AT4G25850 Arabidopsis thaliana HOM05D003168 ORTHO05D003590 1.6e-09 67.0 125 44.0
HanXRQChr11g0322411 Helianthus annuus HOM05D007262 ORTHO05D008524 2.8e-09 66.2 147 40.1
Sopen07g007460 Solanum pennellii HOM05D007262 ORTHO05D008524 3.6e-09 65.9 67 55.2
C08p09700 Brassica napus HOM05D007262 ORTHO05D008524 4.7e-09 65.5 96 49.0
CARHR271200 Cardamine hirsuta HOM05D007262 ORTHO05D008524 4.7e-09 65.5 96 44.8
Solyc07g018310.4 Solanum lycopersicum HOM05D007262 ORTHO05D008524 4.7e-09 65.5 93 45.2
AL8G33380 Arabidopsis lyrata HOM05D007262 ORTHO05D008524 6.2e-09 65.1 106 43.4
BraA01t01667Z Brassica rapa HOM05D003168 ORTHO05D003590 6.2e-09 65.1 84 50.0
ClCG06G013370 Citrullus lanatus HOM05D007262 ORTHO05D008524 6.2e-09 65.1 176 30.7
Rhsim01G0003900 Rhododendron simsii HOM05D000138 ORTHO05D000078 6.2e-09 65.1 175 30.3
A01p17120 Brassica napus HOM05D003168 ORTHO05D003590 8.0e-09 64.7 84 50.0
Aa31LG3G240 Aethionema arabicum HOM05D007262 ORTHO05D008524 1.1e-08 64.3 104 47.1
Ah.14g083780 Amaranthus hybridus HOM05D007262 ORTHO05D008524 1.1e-08 64.3 64 50.0
BcaC09g50739 Brassica carinata HOM05D007262 ORTHO05D008524 1.1e-08 64.3 84 47.6
C01p21440 Brassica napus HOM05D007262 ORTHO05D008524 1.1e-08 64.3 84 47.6
BolC1t02064H Brassica oleracea HOM05D003168 ORTHO05D003590 1.1e-08 64.3 84 47.6
AT5G57400 Arabidopsis thaliana HOM05D007262 ORTHO05D008524 1.8e-08 63.5 107 41.1
CsaV3_1G031620 Cucumis sativus L. HOM05D007262 ORTHO05D008524 1.8e-08 63.5 178 32.0
ECA236G2076 Erigeron canadensis HOM05D007262 ORTHO05D008524 1.8e-08 63.5 91 46.2
AUR62021304 Chenopodium quinoa HOM05D007262 ORTHO05D008524 3.1e-08 62.8 65 58.5
Nitab4.5_0007075g0020 Nicotiana tabacum HOM05D007262 ORTHO05D008524 3.1e-08 62.8 121 38.0
BcaNung04103 Brassica carinata HOM05D007262 ORTHO05D008524 4.0e-08 62.4 84 46.4
A02p08490 Brassica napus HOM05D007262 ORTHO05D008524 4.0e-08 62.4 98 44.9
BraA02t05922Z Brassica rapa HOM05D007262 ORTHO05D008524 4.0e-08 62.4 98 44.9
PGSC0003DMG400013783 Solanum tuberosum HOM05D007262 ORTHO05D008524 4.0e-08 62.4 96 44.8
AUR62033222 Chenopodium quinoa HOM05D007262 ORTHO05D008524 5.2e-08 62.0 65 58.5
BcaC03g14155 Brassica carinata HOM05D007262 ORTHO05D008524 6.8e-08 61.6 98 44.9
SalBow6G4300 Salvia bowleyana HOM05D007262 ORTHO05D008524 8.9e-08 61.2 99 42.4
BcaB05g22344 Brassica carinata HOM05D007262 ORTHO05D008524 1.2e-07 60.8 98 43.9
QL02p097844 Quercus lobata HOM05D007262 ORTHO05D008524 1.5e-07 60.5 139 37.4
C02p14260 Brassica napus HOM05D007262 ORTHO05D008524 2.0e-07 60.1 134 37.3
BolC2t07550H Brassica oleracea HOM05D007262 ORTHO05D008524 2.0e-07 60.1 134 37.3
MELO3C017460.2 Cucumis melo HOM05D007262 ORTHO05D008524 2.6e-07 59.7 74 50.0
Eucgr.C00152 Eucalyptus grandis HOM05D007262 ORTHO05D008524 2.6e-07 59.7 131 32.1
Oeu042172.1 Olea europaea HOM05D007262 ORTHO05D008524 3.4e-07 59.3 136 39.0
CiPaw.08G035800 Carya illinoinensis HOM05D007262 ORTHO05D008524 4.4e-07 58.9 94 42.6
Sabra18G0078900 Salix brachista HOM05D007262 ORTHO05D008524 7.5e-07 58.2 91 40.7
DCAR_017972 Daucus carota HOM05D007262 ORTHO05D008524 9.8e-07 57.8 192 30.7
Sp6g19120 Schrenkiella parvula HOM05D007262 ORTHO05D008524 1.7e-06 57.0 104 40.4
Thhalv10026951m.g Eutrema salsugineum HOM05D007262 ORTHO05D008524 2.9e-06 56.2 90 44.4
Carub.0008s1792 Capsella rubella HOM05D007262 ORTHO05D008524 3.7e-06 55.8 83 43.4


User provided reference genes

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