Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G143500 Phaseolus vulgaris HOM05D007665 ORTHO05D008293 9.6e-161 570.1 284 100.0
VMungo1215G3214 Vigna mungo HOM05D007665 ORTHO05D008293 1.2e-139 500.0 285 89.5
Glyma.13G098200 Glycine max HOM05D007665 ORTHO05D008293 3.5e-118 428.7 285 78.9
Glyma.17G061500 Glycine max HOM05D007665 ORTHO05D008293 1.9e-116 422.9 286 78.7
Glyma.15G163200 Glycine max HOM05D007665 ORTHO05D008293 2.2e-96 356.3 303 66.0
Glyma.09G056900 Glycine max HOM05D007665 ORTHO05D008293 1.1e-92 344.0 305 64.3
VMungo1309G2535 Vigna mungo HOM05D007665 ORTHO05D008293 2.3e-90 336.3 309 61.2
Phvul.009G238500 Phaseolus vulgaris HOM05D007665 ORTHO05D008293 2.0e-89 333.2 305 62.3
Lj6g0002099 Lotus japonicus HOM05D007665 ORTHO05D008293 1.3e-80 303.9 300 61.3
Lalb_Chr18g0052461 Lupinus albus HOM05D007665 ORTHO05D008293 1.9e-76 290.0 297 59.6
Lj4g0023476 Lotus japonicus HOM05D007665 ORTHO05D008293 8.4e-72 274.6 239 65.7
QL11p005089 Quercus lobata HOM05D007665 ORTHO05D008293 1.1e-66 257.7 294 49.7
Lalb_Chr12g0199491 Lupinus albus HOM05D007665 ORTHO05D008293 6.8e-66 255.0 286 54.9
Prupe.1G081700 Prunus persica HOM05D007665 ORTHO05D008293 7.1e-63 245.0 296 50.7
TPR.G9242 Trifolium pratense HOM05D007665 ORTHO05D008293 2.1e-62 243.4 295 49.8
CANSAT11G1651 Cannabis sativa HOM05D007665 ORTHO05D008293 1.3e-61 240.7 288 50.3
arahy.Tifrunner.gnm1.ann1.38WMVK Arachis hypogaea HOM05D007665 ORTHO05D008293 6.6e-61 238.4 301 53.5
CiPaw.07G194500 Carya illinoinensis HOM05D007665 ORTHO05D008293 2.5e-60 236.5 294 48.0
Medtr2g036740 Medicago truncatula HOM05D007665 ORTHO05D008293 2.5e-60 236.5 293 49.5
Lalb_Chr15g0084041 Lupinus albus HOM05D007665 ORTHO05D008293 1.3e-59 234.2 226 58.0
arahy.Tifrunner.gnm1.ann1.HIJU8F Arachis hypogaea HOM05D007665 ORTHO05D008293 3.6e-59 232.6 301 53.2
FvH4_4g07760 Fragaria vesca HOM05D007665 ORTHO05D008293 9.0e-58 228.0 304 48.7
FAN12G1950 Fragaria x ananassa HOM05D007665 ORTHO05D008293 9.0e-58 228.0 304 48.7
MD16G1253900 Malus domestica HOM05D007665 ORTHO05D008293 9.0e-58 228.0 295 46.8
FAN07G1410 Fragaria x ananassa HOM05D007665 ORTHO05D008293 3.4e-57 226.1 304 47.7
RcHm_v2.0_Chr4g0400841 Rosa chinensis HOM05D007665 ORTHO05D008293 1.7e-56 223.8 305 47.9
FAN17G2593 Fragaria x ananassa HOM05D007665 ORTHO05D008293 8.4e-56 221.5 304 46.7
Potri.018G090000 Populus trichocarpa HOM05D007665 ORTHO05D008293 6.0e-54 215.3 289 46.4
CiPaw.08G034700 Carya illinoinensis HOM05D007665 ORTHO05D008293 7.9e-54 214.9 294 48.0
FAN22G0501 Fragaria x ananassa HOM05D007665 ORTHO05D008293 1.3e-53 214.2 304 45.4
Ca_21241_v3 Cicer arietinum L. HOM05D007665 ORTHO05D008293 2.5e-52 209.9 240 56.2
Duzib150G0483 Durio zibethinus HOM05D007665 ORTHO05D008293 2.5e-52 209.9 300 45.7
Cfa013407 Carpinus fangiana HOM05D007665 ORTHO05D008293 6.2e-51 205.3 300 45.7
Psat1g146200 Pisum sativum HOM05D007665 ORTHO05D008293 1.3e-48 197.6 298 46.3
MD13G1247000 Malus domestica HOM05D007665 ORTHO05D008293 2.9e-48 196.4 245 51.0
COL.COLO4_35626 Corchorus olitorius HOM05D007665 ORTHO05D008293 4.9e-48 195.7 289 46.0
Gohir.D08G093300 Gossypium hirsutum HOM05D007665 ORTHO05D008293 8.4e-48 194.9 291 45.4
TPR.G5363 Trifolium pratense HOM05D007665 ORTHO05D008293 2.4e-47 193.4 261 52.1
Potri.006G165500 Populus trichocarpa HOM05D007665 ORTHO05D008293 3.2e-47 193.0 287 47.0
Sed0009659 Sechium edule HOM05D007665 ORTHO05D008293 4.2e-47 192.6 297 42.4
Gorai.004G098900 Gossypium raimondii HOM05D007665 ORTHO05D008293 7.1e-47 191.8 292 45.5
Sabra18G0077500 Salix brachista HOM05D007665 ORTHO05D008293 1.6e-46 190.7 299 41.1
Lalb_Chr13g0300111 Lupinus albus HOM05D007665 ORTHO05D008293 2.7e-46 189.9 213 53.1
arahy.Tifrunner.gnm1.ann1.6P3KM7 Arachis hypogaea HOM05D007665 ORTHO05D008293 1.8e-45 187.2 314 45.2
Thecc.09G178300 Theobroma cacao HOM05D007665 ORTHO05D008293 1.8e-45 187.2 296 43.9
TWI34G1272 Tripterygium wilfordii HOM05D007665 ORTHO05D008293 1.8e-45 187.2 298 44.6
Gohir.A08G083600 Gossypium hirsutum HOM05D007665 ORTHO05D008293 3.9e-45 186.0 292 44.5
arahy.Tifrunner.gnm1.ann1.D7NBKG Arachis hypogaea HOM05D007665 ORTHO05D008293 1.5e-44 184.1 312 43.6
Sabra06G0127300 Salix brachista HOM05D007665 ORTHO05D008293 5.6e-44 182.2 284 44.0
ClCG06G013480 Citrullus lanatus HOM05D007665 ORTHO05D008293 6.2e-43 178.7 308 43.2
Dinv19563 Davidia involucrata HOM05D007665 ORTHO05D008293 4.9e-40 169.1 296 40.2
Manes.06G022200 Manihot esculenta HOM05D007665 ORTHO05D008293 5.5e-39 165.6 295 41.4
MELO3C017449.2 Cucumis melo HOM05D007665 ORTHO05D008293 1.3e-37 161.0 324 40.4
CsaV3_1G031740 Cucumis sativus L. HOM05D007665 ORTHO05D008293 1.8e-37 160.6 326 40.5
Cpa.g.c26900 Carica papaya HOM05D007665 ORTHO05D008293 5.1e-37 159.1 317 38.2
TWI32G1073 Tripterygium wilfordii HOM05D007665 ORTHO05D008293 6.7e-37 158.7 298 40.9
Haze_21953 Corylus avellana HOM05D007665 ORTHO05D008293 1.9e-36 157.1 223 45.7
Medtr4g127680 Medicago truncatula HOM05D007665 ORTHO05D008293 2.5e-36 156.8 238 45.8
Atru.chr7.835 Acer truncatum HOM05D007665 ORTHO05D008293 5.7e-36 155.6 291 42.3
Ciclev10009102m.g Citrus clementina HOM05D007665 ORTHO05D008293 2.1e-35 153.7 299 40.5
TAR625G0485 Trochodendron aralioides HOM05D007665 ORTHO05D008293 1.2e-33 147.9 319 36.7
Manes.14G158020 Manihot esculenta HOM05D007665 ORTHO05D008293 4.5e-33 146.0 306 38.9
Sed0009111 Sechium edule HOM05D007665 ORTHO05D008293 2.2e-32 143.7 299 37.1
Eucgr.C00139 Eucalyptus grandis HOM05D007665 ORTHO05D008293 1.1e-31 141.4 290 37.6
Psat0s2178g0120 Pisum sativum HOM05D007665 ORTHO05D008293 1.3e-29 134.4 221 43.0
GSVIVG01029234001 Vitis vinifera HOM05D007665 ORTHO05D008293 3.0e-29 133.3 253 39.5
Rhsim01G0002100 Rhododendron simsii HOM05D007665 ORTHO05D008293 7.7e-25 118.6 266 34.2
Actinidia01304 Actinidia chinensis HOM05D007665 ORTHO05D008293 1.0e-24 118.2 316 31.6
Hma1.2p1_1303F.1_g274400 Hydrangea macrophylla HOM05D007665 ORTHO05D008293 3.2e-23 113.2 311 33.4
Cc06_g13100 Coffea canephora HOM05D007665 ORTHO05D008293 3.9e-21 106.3 294 31.3
MBI16_g38083_MAGBIO Magnolia biondii HOM05D007665 ORTHO05D008293 3.3e-20 103.2 335 31.9
PGR142G3274 Punica granatum HOM05D007665 ORTHO05D008293 1.3e-19 101.3 300 33.3
Gohir.A08G019000 Gossypium hirsutum HOM05D007665 ORTHO05D008293 4.8e-19 99.4 215 36.7
Gohir.A05G003700 Gossypium hirsutum HOM05D007665 ORTHO05D008293 3.1e-18 96.7 284 31.3
Gorai.004G027000 Gossypium raimondii HOM05D007665 ORTHO05D008293 5.3e-18 95.9 211 36.5
Gorai.009G003800 Gossypium raimondii HOM05D007665 ORTHO05D008293 9.1e-18 95.1 281 32.0
BcaC04g19976 Brassica carinata HOM05D010683 ORTHO05D008293 7.7e-17 92.0 236 30.9
C09p49230 Brassica napus HOM05D010683 ORTHO05D008293 7.7e-17 92.0 236 30.9
BolC9t57773H Brassica oleracea HOM05D010683 ORTHO05D008293 7.7e-17 92.0 236 30.9
A10p14800 Brassica napus HOM05D010683 ORTHO05D008293 2.2e-16 90.5 236 30.5
Gohir.D05G004100 Gossypium hirsutum HOM05D007665 ORTHO05D008293 8.5e-16 88.6 226 34.1
A02p08580 Brassica napus HOM05D010683 ORTHO05D008293 2.1e-14 84.0 237 29.5
BraA02t05927Z Brassica rapa HOM05D010683 ORTHO05D008293 2.1e-14 84.0 237 29.5
Aqoxy7G02985 Aquilegia oxysepala HOM05D007665 ORTHO05D008293 1.4e-13 81.3 277 31.8
DCAR_009919 Daucus carota HOM05D007665 ORTHO05D008293 3.0e-13 80.1 239 35.1
BcaB08g36093 Brassica carinata HOM05D010683 ORTHO05D008293 5.2e-13 79.3 311 28.0
THA.LOC104811782 Tarenaya hassleriana HOM05D007665 ORTHO05D008293 3.3e-12 76.6 236 29.7
ATR0580G179 Amborella trichopoda HOM05D007665 ORTHO05D008293 5.7e-12 75.9 279 31.2
THA.LOC104813513 Tarenaya hassleriana HOM05D007665 ORTHO05D008293 2.8e-11 73.6 167 35.9
BcaC03g14162 Brassica carinata HOM05D010683 ORTHO05D008293 1.8e-10 70.9 119 37.8
Sp6g19060 Schrenkiella parvula HOM05D010683 ORTHO05D008293 2.4e-10 70.5 252 27.0
C02p14330 Brassica napus HOM05D010683 ORTHO05D008293 4.1e-10 69.7 119 37.8
BolC2t07559H Brassica oleracea HOM05D010683 ORTHO05D008293 4.1e-10 69.7 119 37.8
Carub.0008s1785 Capsella rubella HOM05D010683 ORTHO05D008293 5.3e-10 69.3 76 48.7
PSO063G5967 Papaver somniferum HOM05D007665 ORTHO05D008293 1.2e-09 68.2 230 30.9
HPP92_018370 Vanilla planifolia HOM05D007665 ORTHO05D008293 1.6e-09 67.8 184 28.3
Solyc07g017870.2 Solanum lycopersicum HOM05D023392 ORTHO05D008293 2.0e-09 67.4 240 29.2
CARHR271130 Cardamine hirsuta HOM05D010683 ORTHO05D008293 2.6e-09 67.0 251 27.9
PSO170G3678 Papaver somniferum HOM05D007665 ORTHO05D008293 2.6e-09 67.0 159 36.5
Thhalv10014550m.g Eutrema salsugineum HOM05D010683 ORTHO05D008293 5.9e-09 65.9 241 28.6
AL8G33310 Arabidopsis lyrata HOM05D010683 ORTHO05D008293 7.7e-09 65.5 60 55.0
AT5G57340 Arabidopsis thaliana HOM05D010683 ORTHO05D008293 7.7e-09 65.5 60 55.0
Aa31LG3G13210 Aethionema arabicum HOM05D010683 ORTHO05D008293 1.0e-08 65.1 68 50.0
ATR0030G044 Amborella trichopoda HOM05D004032 ORTHO05D004462 1.3e-08 64.7 192 32.8
Lsat_1_v5_gn_5_85601 Lactuca sativa HOM05D007665 ORTHO05D008293 8.5e-08 62.0 202 31.7
MSTRG.6233 Avicennia marina HOM05D007665 ORTHO05D008293 2.5e-07 60.5 238 31.5
CDE05G1157 Ceratophyllum demersum HOM05D007665 ORTHO05D008293 4.2e-07 59.7 195 30.3
BcaB05g22338 Brassica carinata HOM05D010683 ORTHO05D008293 7.2e-07 58.9 236 25.8
Nn8g39181 Nelumbo nucifera HOM05D007665 ORTHO05D008293 7.2e-07 58.9 154 31.8
Oeu056507.1 Olea europaea HOM05D007665 ORTHO05D008293 9.4e-07 58.5 163 36.2


User provided reference genes

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