Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G142600 Phaseolus vulgaris HOM05D001966 ORTHO05D007227 2.0e-49 198.7 99 100.0
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 5.7e-28 127.5 90 76.7
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 1.1e-26 123.2 94 71.3
arahy.Tifrunner.gnm1.ann1.3I0RGA Arachis hypogaea HOM05D001966 ORTHO05D007227 1.4e-21 106.3 92 62.0
Gohir.1Z049882 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.2e-20 103.2 83 67.5
Gohir.A04G039270 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.2e-20 103.2 83 67.5
Gohir.A05G323724 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.2e-20 103.2 83 67.5
arahy.Tifrunner.gnm1.ann1.KZKE62 Arachis hypogaea HOM05D001966 ORTHO05D007227 1.5e-20 102.8 100 62.0
Sed0014217 Sechium edule HOM05D001966 ORTHO05D007227 1.5e-20 102.8 83 69.9
Gorai.005G020800 Gossypium raimondii HOM05D001966 ORTHO05D007227 2.7e-17 92.0 83 60.2
Gohir.D02G016950 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.7e-16 89.4 83 62.7
Phvul.002G203700 Phaseolus vulgaris HOM05D001966 ORTHO05D007227 8.6e-16 87.0 52 80.8
arahy.Tifrunner.gnm1.ann1.WHCD0B Arachis hypogaea HOM05D001966 ORTHO05D007227 1.1e-15 86.7 83 60.2
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 5.6e-15 84.3 75 61.3
VMungo1127G1224 Vigna mungo HOM05D001966 ORTHO05D007227 5.6e-15 84.3 75 61.3
arahy.Tifrunner.gnm1.ann1.UQV5ZS Arachis hypogaea HOM05D001966 ORTHO05D007227 9.5e-15 83.6 45 86.7
arahy.Tifrunner.gnm1.ann1.Z8IK0I Arachis hypogaea HOM05D001966 ORTHO05D007227 9.5e-15 83.6 45 86.7
Sed0012652 Sechium edule HOM05D001966 ORTHO05D007227 9.5e-15 83.6 45 86.7
Sopen06g012240 Solanum pennellii HOM05D000014 ORTHO05D000016 2.8e-14 82.0 44 88.6
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 3.6e-14 81.6 63 73.0
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 5.2e-13 77.8 45 84.4
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 5.2e-13 77.8 45 84.4
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 5.2e-13 77.8 45 84.4
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 6.8e-13 77.4 45 82.2
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 1.2e-12 76.6 45 82.2
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 1.2e-12 76.6 45 82.2
arahy.Tifrunner.gnm1.ann1.HASF1T Arachis hypogaea HOM05D001966 ORTHO05D007227 2.0e-12 75.9 45 80.0
arahy.Tifrunner.gnm1.ann1.FN7561 Arachis hypogaea HOM05D001966 ORTHO05D007227 2.6e-12 75.5 82 56.1
BcaC04g22012 Brassica carinata HOM05D001966 ORTHO05D007227 3.4e-12 75.1 45 82.2
BcaNung01515 Brassica carinata HOM05D001966 ORTHO05D010449 7.5e-12 73.9 82 54.9
MD15G1346300 Malus domestica HOM05D001966 ORTHO05D007227 3.7e-11 71.6 42 83.3
Migut.B00950 Erythranthe guttata HOM05D001966 ORTHO05D007227 8.3e-11 70.5 38 89.5
Gohir.A09G039165 Gossypium hirsutum HOM05D001966 ORTHO05D007227 4.1e-10 68.2 51 66.7
Gorai.006G045900 Gossypium raimondii HOM05D001966 ORTHO05D007227 5.4e-10 67.8 51 68.6
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 1.6e-09 66.2 43 76.7
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 7.8e-09 63.9 34 91.2
Peaxi162Scf00383g00065 Petunia axillaris HOM05D001966 ORTHO05D007227 7.8e-09 63.9 32 90.6
LjContig00489g0013211 Lotus japonicus HOM05D001966 ORTHO05D007227 1.0e-08 63.5 34 88.2
BraSC58t46466Z Brassica rapa HOM05D001966 ORTHO05D007227 1.3e-08 63.2 35 88.6
arahy.Tifrunner.gnm1.ann1.DHX5K3 Arachis hypogaea HOM05D001966 ORTHO05D007227 5.1e-08 61.2 43 74.4
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 4.3e-07 58.2 36 83.3
Medtr0002s0250 Medicago truncatula HOM05D001966 ORTHO05D007227 4.3e-07 58.2 36 83.3
Medtr3g035620 Medicago truncatula HOM05D001966 ORTHO05D007227 4.3e-07 58.2 36 83.3
ClCG04G004710 Citrullus lanatus HOM05D001966 ORTHO05D007429 5.6e-07 57.8 39 71.8
arahy.Tifrunner.gnm1.ann1.77ZW6W Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-06 56.6 36 80.6
arahy.Tifrunner.gnm1.ann1.EGZ6K4 Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-06 56.6 36 80.6
arahy.Tifrunner.gnm1.ann1.ZHN7AL Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-06 56.6 36 80.6
Gohir.D02G151976 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.2e-06 56.6 61 50.8
Cfa023004 Carpinus fangiana HOM05D001966 ORTHO05D007227 1.6e-06 56.2 36 83.3
DCAR_001522 Daucus carota HOM05D001966 ORTHO05D007227 1.6e-06 56.2 36 83.3
Sed0001460 Sechium edule HOM05D001966 ORTHO05D007227 1.6e-06 56.2 32 78.1
Psat5g118880 Pisum sativum HOM05D001966 ORTHO05D007227 2.1e-06 55.8 36 80.6
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 4.7e-06 54.7 36 80.6
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 4.7e-06 54.7 36 80.6
HPP92_028385 Vanilla planifolia HOM05D001966 ORTHO05D007227 4.7e-06 54.7 36 80.6


User provided reference genes

Program Settings