Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G139800 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 3.2e-121 439.1 352 100.0
VMungo1215G2556 Vigna mungo HOM05D003453 ORTHO05D004154 3.3e-110 402.5 350 92.0
Lalb_Chr13g0299841 Lupinus albus HOM05D003453 ORTHO05D004154 2.8e-93 346.3 356 82.9
Glyma.17G057600 Glycine max HOM05D003453 ORTHO05D004154 1.1e-89 334.3 361 85.0
Lalb_Chr07g0180741 Lupinus albus HOM05D003453 ORTHO05D004154 7.1e-89 331.6 356 80.9
Medtr4g127120 Medicago truncatula HOM05D003453 ORTHO05D004154 2.1e-88 330.1 353 80.2
Lj4g0007200 Lotus japonicus HOM05D003453 ORTHO05D004154 1.1e-86 324.3 356 86.0
FAN12G0296 Fragaria x ananassa HOM05D003453 ORTHO05D004154 2.5e-86 323.2 355 70.1
Prupe.1G072100 Prunus persica HOM05D003453 ORTHO05D004154 1.6e-85 320.5 354 78.2
MD13G1241200 Malus domestica HOM05D003453 ORTHO05D004154 6.9e-84 315.1 354 77.7
MD16G1245200 Malus domestica HOM05D003453 ORTHO05D004154 7.6e-83 311.6 355 78.0
Ca_21264_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 2.2e-82 310.1 362 75.7
FAN22G1784 Fragaria x ananassa HOM05D003453 ORTHO05D004154 4.2e-81 305.8 352 68.2
TPR.G5414 Trifolium pratense HOM05D003453 ORTHO05D004154 5.5e-81 305.4 354 72.3
FvH4_4g06910 Fragaria vesca HOM05D003453 ORTHO05D004154 7.2e-81 305.1 355 70.7
Psat4g014280 Pisum sativum HOM05D003453 ORTHO05D004154 4.6e-80 302.4 361 63.4
PGR044G1644 Punica granatum HOM05D003453 ORTHO05D004154 1.3e-79 300.8 329 76.9
FAN07G0750 Fragaria x ananassa HOM05D003453 ORTHO05D004154 3.0e-79 299.7 352 69.9
COL.COLO4_37566 Corchorus olitorius HOM05D003453 ORTHO05D004154 6.7e-79 298.5 372 73.7
RcHm_v2.0_Chr4g0398811 Rosa chinensis HOM05D003453 ORTHO05D004154 6.7e-79 298.5 355 70.1
Thecc.09G192200 Theobroma cacao HOM05D003453 ORTHO05D004154 1.1e-78 297.7 360 75.0
FAN17G0675 Fragaria x ananassa HOM05D003453 ORTHO05D004154 1.6e-77 293.9 352 69.3
TWI34G1803 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 3.7e-77 292.7 353 82.4
Atru.chr7.914 Acer truncatum HOM05D003453 ORTHO05D004154 6.3e-77 292.0 369 74.3
CiPaw.08G031400 Carya illinoinensis HOM05D003453 ORTHO05D004154 1.1e-76 291.2 355 75.5
Ciclev10008785m.g Citrus clementina HOM05D003453 ORTHO05D004154 4.5e-75 285.8 355 74.6
Duzib168G0040 Durio zibethinus HOM05D003453 ORTHO05D004154 4.5e-75 285.8 353 71.4
Duzib150G0655 Durio zibethinus HOM05D003453 ORTHO05D004154 5.9e-75 285.4 353 72.2
Gohir.A13G182300 Gossypium hirsutum HOM05D003453 ORTHO05D004154 5.9e-75 285.4 323 81.7
TWI32G0581 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 5.9e-75 285.4 361 78.9
Gorai.013G211100 Gossypium raimondii HOM05D003453 ORTHO05D004154 3.8e-74 282.7 333 80.5
Manes.14G161200 Manihot esculenta HOM05D003453 ORTHO05D004154 3.8e-74 282.7 356 79.5
arahy.Tifrunner.gnm1.ann1.JP7J3T Arachis hypogaea HOM05D003453 ORTHO05D004154 6.5e-74 282.0 358 69.6
Sp3g32700 Schrenkiella parvula HOM05D003453 ORTHO05D004154 3.2e-73 279.6 325 80.3
AL3G48980 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 3.6e-72 276.2 358 74.6
AT2G19330 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 3.6e-72 276.2 376 71.0
Cpa.g.sc115.61 Carica papaya HOM05D003453 ORTHO05D004154 4.6e-72 275.8 353 73.7
Thhalv10022960m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 1.8e-71 273.9 325 78.5
A07p01420 Brassica napus HOM05D003453 ORTHO05D004154 3.9e-71 272.7 325 78.5
C07p02870 Brassica napus HOM05D003453 ORTHO05D004154 3.9e-71 272.7 325 78.5
BolC7t40684H Brassica oleracea HOM05D003453 ORTHO05D004154 3.9e-71 272.7 325 78.5
BraA07t27936Z Brassica rapa HOM05D003453 ORTHO05D004154 3.9e-71 272.7 325 78.5
Haze_22047 Corylus avellana HOM05D003453 ORTHO05D004154 6.7e-71 271.9 359 56.8
BcaB03g16722 Brassica carinata HOM05D003453 ORTHO05D004154 2.0e-70 270.4 325 78.2
Carub.0003s3355 Capsella rubella HOM05D003453 ORTHO05D004154 2.5e-70 270.0 325 78.5
ClCG11G011550 Citrullus lanatus HOM05D003453 ORTHO05D004154 7.4e-70 268.5 326 78.2
CARHR109780 Cardamine hirsuta HOM05D003453 ORTHO05D004154 6.3e-69 265.4 325 77.2
Nn8g40645 Nelumbo nucifera HOM05D003453 ORTHO05D004154 4.1e-68 262.7 353 65.2
Potri.006G072700 Populus trichocarpa HOM05D003453 ORTHO05D004154 5.3e-68 262.3 373 72.1
Duzib170G0719 Durio zibethinus HOM05D003453 ORTHO05D004154 6.9e-68 261.9 354 74.3
Actinidia38507 Actinidia chinensis HOM05D003453 ORTHO05D004154 9.1e-68 261.5 345 68.4
Migut.J00777 Erythranthe guttata HOM05D003453 ORTHO05D004154 9.1e-68 261.5 368 66.8
Potri.018G139700 Populus trichocarpa HOM05D003453 ORTHO05D004154 4.5e-67 259.2 371 72.8
Oeu035455.1 Olea europaea HOM05D003453 ORTHO05D004154 7.7e-67 258.5 341 67.7
Glyma.09G061500 Glycine max HOM05D003453 ORTHO05D004154 1.3e-66 257.7 347 74.6
TAR625G0633 Trochodendron aralioides HOM05D003453 ORTHO05D004154 1.7e-66 257.3 350 73.4
SalBow3G1932 Salvia bowleyana HOM05D003453 ORTHO05D004154 2.2e-66 256.9 354 73.2
GSVIVG01029273001 Vitis vinifera HOM05D003453 ORTHO05D004154 5.0e-66 255.8 311 80.7
Aa31LG8G16370 Aethionema arabicum HOM05D003453 ORTHO05D004154 6.5e-66 255.4 336 72.9
Sabra06G0054100 Salix brachista HOM05D003453 ORTHO05D004154 6.5e-66 255.4 373 72.1
CSS0013411 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 1.9e-65 253.8 347 67.4
CSS0032765 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 2.5e-65 253.4 364 65.7
CsaV3_2G008970 Cucumis sativus L. HOM05D003453 ORTHO05D004154 4.2e-65 252.7 362 70.2
Eucgr.C02218 Eucalyptus grandis HOM05D003453 ORTHO05D004154 1.6e-64 250.8 352 72.7
Oeu043899.1 Olea europaea HOM05D003453 ORTHO05D004154 3.6e-64 249.6 355 63.9
Sed0020380 Sechium edule HOM05D003453 ORTHO05D004154 2.3e-63 246.9 326 77.3
THA.LOC104814639 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 8.8e-63 245.0 325 76.3
arahy.Tifrunner.gnm1.ann1.SX1TLQ Arachis hypogaea HOM05D003453 ORTHO05D004154 2.0e-62 243.8 360 68.1
Eucgr.C00085 Eucalyptus grandis HOM05D003453 ORTHO05D004154 3.3e-62 243.0 303 75.6
CsaV3_1G032040 Cucumis sativus L. HOM05D003453 ORTHO05D004154 5.7e-62 242.3 316 78.5
Hma1.2p1_0235F.1_g098820 Hydrangea macrophylla HOM05D003453 ORTHO05D004154 5.7e-62 242.3 305 76.4
TPR.G2523 Trifolium pratense HOM05D003453 ORTHO05D004154 5.7e-62 242.3 352 74.4
Gorai.012G008100 Gossypium raimondii HOM05D003453 ORTHO05D004154 1.7e-61 240.7 354 64.1
CANSAT11G2669 Cannabis sativa HOM05D003453 ORTHO05D004154 2.8e-61 240.0 337 77.4
Glyma.15G167800 Glycine max HOM05D003453 ORTHO05D004154 8.2e-61 238.4 362 69.9
Gohir.D04G006700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 1.4e-60 237.7 354 67.5
Oeu044656.1 Olea europaea HOM05D003453 ORTHO05D004154 1.4e-60 237.7 339 66.4
EL10Ac8g19292 Beta vulgaris HOM05D003453 ORTHO05D004154 5.3e-60 235.7 326 69.9
Dinv25469 Davidia involucrata HOM05D003453 ORTHO05D004154 7.0e-60 235.3 353 65.2
Aqoxy7G02898 Aquilegia oxysepala HOM05D003453 ORTHO05D004154 2.0e-59 233.8 350 71.4
Sabra18G0114200 Salix brachista HOM05D003453 ORTHO05D004154 4.5e-59 232.6 325 74.2
Gohir.A05G408700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 7.7e-59 231.9 346 67.9
Lalb_Chr23g0276711 Lupinus albus HOM05D003453 ORTHO05D004154 7.7e-59 231.9 334 67.1
Eucgr.C00084 Eucalyptus grandis HOM05D003453 ORTHO05D004154 1.0e-58 231.5 303 77.6
VMungo1309G3166 Vigna mungo HOM05D003453 ORTHO05D004154 2.2e-58 230.3 330 77.0
BraA03t14987Z Brassica rapa HOM05D003453 ORTHO05D004154 6.5e-58 228.8 346 69.1
A03p59300 Brassica napus HOM05D003453 ORTHO05D004154 1.1e-57 228.0 346 68.5
Phvul.009G234500 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 1.5e-57 227.6 328 72.9
Manes.06G017500 Manihot esculenta HOM05D003453 ORTHO05D004154 2.5e-57 226.9 350 71.7
Lj6g0025589 Lotus japonicus HOM05D003453 ORTHO05D004154 4.2e-57 226.1 360 66.7
MELO3C003949.2 Cucumis melo HOM05D003453 ORTHO05D004154 7.2e-57 225.3 326 71.5
Ah.09g228510 Amaranthus hybridus HOM05D003453 ORTHO05D004154 1.2e-56 224.6 316 74.1
Cc06_g17230 Coffea canephora HOM05D003453 ORTHO05D004154 1.2e-56 224.6 311 65.3
Medtr2g038380 Medicago truncatula HOM05D003453 ORTHO05D004154 1.6e-56 224.2 334 75.4
DCAR_009479 Daucus carota HOM05D003453 ORTHO05D004154 3.6e-56 223.0 362 61.0
Thhalv10027502m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 1.4e-55 221.1 332 69.3
Psat1g142960 Pisum sativum HOM05D003453 ORTHO05D004154 5.2e-55 219.2 353 72.5
Carub.0004s1475 Capsella rubella HOM05D003453 ORTHO05D004154 8.8e-55 218.4 333 66.1
AT4G29880 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 1.1e-54 218.0 333 70.0
CDE05G3189 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 3.3e-54 216.5 333 65.5
DCAR_020142 Daucus carota HOM05D003453 ORTHO05D004154 3.3e-54 216.5 363 60.6
AL7G22370 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 5.7e-54 215.7 325 70.8
Hund24523 Selenicereus undatus HOM05D003453 ORTHO05D004154 3.7e-53 213.0 315 70.8
CDE05G1169 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 8.2e-53 211.8 333 57.1
QL02p064658 Quercus lobata HOM05D003453 ORTHO05D004154 1.8e-52 210.7 355 65.9
CARHR237770 Cardamine hirsuta HOM05D003453 ORTHO05D004154 3.1e-52 209.9 325 72.0
ClCG06G013840 Citrullus lanatus HOM05D003453 ORTHO05D004154 7.0e-52 208.8 290 73.1
PSO063G7373 Papaver somniferum HOM05D003453 ORTHO05D004154 1.2e-51 208.0 379 65.7
Sed0024940 Sechium edule HOM05D003453 ORTHO05D004154 4.5e-51 206.1 320 66.6
arahy.Tifrunner.gnm1.ann1.N816GG Arachis hypogaea HOM05D003453 ORTHO05D004154 5.0e-50 202.6 294 73.1
SGA_v2.0_scaffold31G12781 Striga asiatica HOM05D003453 ORTHO05D004154 6.5e-50 202.2 364 60.4
CiPaw.07G199200 Carya illinoinensis HOM05D003453 ORTHO05D004154 8.5e-50 201.8 285 70.2
arahy.Tifrunner.gnm1.ann1.3E2B2N Arachis hypogaea HOM05D003453 ORTHO05D004154 3.2e-49 199.9 294 72.4
Sc08g0004730 Simmondsia chinensis HOM05D003453 ORTHO05D004154 5.5e-49 199.1 386 46.4
MBI16_g09350_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 9.4e-49 198.4 338 62.4
SHI03070 Sapria himalayana HOM05D003453 ORTHO05D004154 1.6e-48 197.6 334 51.2
CDE02G3632 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 2.1e-48 197.2 336 60.7
C07p54660 Brassica napus HOM05D003453 ORTHO05D004154 3.6e-48 196.4 333 59.2
BolC7t45955H Brassica oleracea HOM05D003453 ORTHO05D004154 3.6e-48 196.4 333 59.2
Psat1g142440 Pisum sativum HOM05D003453 ORTHO05D004154 4.7e-48 196.1 351 69.5
Peaxi162Scf00006g02914 Petunia axillaris HOM05D003453 ORTHO05D004154 6.1e-48 195.7 349 66.2
THA.LOC104817769 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 6.1e-48 195.7 376 60.6
Thhalv10025419m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 1.4e-47 194.5 322 71.1
BraA03t14715Z Brassica rapa HOM05D003453 ORTHO05D004154 7.5e-46 188.7 337 54.9
ECA240G3569 Erigeron canadensis HOM05D003453 ORTHO05D004154 7.5e-46 188.7 325 71.7
PSO170G1153 Papaver somniferum HOM05D003453 ORTHO05D004154 1.7e-45 187.6 327 70.3
HanXRQChr09g0245371 Helianthus annuus HOM05D003453 ORTHO05D004154 2.8e-45 186.8 332 67.2
A03p56450 Brassica napus HOM05D003453 ORTHO05D004154 3.7e-45 186.4 333 65.5
AT4G26050 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 8.3e-45 185.3 328 68.3
CARHR233550 Cardamine hirsuta HOM05D003453 ORTHO05D004154 1.1e-44 184.9 339 67.6
Gohir.D13G185000 Gossypium hirsutum HOM05D003453 ORTHO05D004154 1.1e-44 184.9 263 84.8
BcaC06g32772 Brassica carinata HOM05D003453 ORTHO05D004154 3.1e-44 183.3 333 66.1
Rhsim02G0202600 Rhododendron simsii HOM05D003453 ORTHO05D004154 5.4e-44 182.6 344 68.0
BolC1t02107H Brassica oleracea HOM05D003453 ORTHO05D004154 7.0e-44 182.2 339 67.6
A01p17310 Brassica napus HOM05D003453 ORTHO05D004154 9.1e-44 181.8 339 66.7
BraA01t01686Z Brassica rapa HOM05D003453 ORTHO05D004154 9.1e-44 181.8 339 66.7
PSO063G4618 Papaver somniferum HOM05D003453 ORTHO05D004154 9.1e-44 181.8 327 70.0
Rhsim03G0267900 Rhododendron simsii HOM05D003453 ORTHO05D004154 9.1e-44 181.8 307 72.6
BcaNung00498 Brassica carinata HOM05D003453 ORTHO05D004154 2.0e-43 180.6 319 64.9
unitig_578.g15728 Utricularia gibba HOM05D003453 ORTHO05D004154 2.0e-43 180.6 355 52.4
Lsat_1_v5_gn_7_55120 Lactuca sativa HOM05D003453 ORTHO05D004154 4.5e-43 179.5 347 66.6
AL7G26940 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 5.9e-43 179.1 328 67.1
HanXRQChr04g0103791 Helianthus annuus HOM05D003453 ORTHO05D004154 1.3e-42 177.9 332 65.7
HanXRQChr05g0142141 Helianthus annuus HOM05D003453 ORTHO05D004154 5.0e-42 176.0 323 58.8
C01p21810 Brassica napus HOM05D003453 ORTHO05D004154 8.5e-42 175.3 339 65.8
BcaC06g36564 Brassica carinata HOM05D003453 ORTHO05D004154 1.1e-41 174.9 250 80.4
Actinidia29965 Actinidia chinensis HOM05D003453 ORTHO05D004154 5.5e-41 172.6 163 63.2
DCAR_018009 Daucus carota HOM05D003453 ORTHO05D004154 7.2e-41 172.2 369 56.4
Carub.0007s1491 Capsella rubella HOM05D003453 ORTHO05D004154 3.6e-40 169.9 328 60.1
Ca_02128_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 3.0e-39 166.8 336 60.4
Sp7g27690 Schrenkiella parvula HOM05D003453 ORTHO05D004154 5.2e-39 166.0 325 64.0
PGSC0003DMG400006458 Solanum tuberosum HOM05D003453 ORTHO05D004154 6.8e-39 165.6 319 67.4
BolC7t46200H Brassica oleracea HOM05D003453 ORTHO05D004154 1.2e-38 164.9 346 60.7
C07p57310 Brassica napus HOM05D003453 ORTHO05D004154 2.6e-38 163.7 346 60.4
AUR62027430 Chenopodium quinoa HOM05D003453 ORTHO05D004154 1.7e-37 161.0 322 46.9
Sopen12g008270 Solanum pennellii HOM05D003453 ORTHO05D004154 6.3e-37 159.1 319 62.4
Solyc12g017480.3 Solanum lycopersicum HOM05D003453 ORTHO05D004154 8.3e-37 158.7 319 62.4
Oeu012385.1 Olea europaea HOM05D003453 ORTHO05D004154 1.1e-36 158.3 309 44.0
Sed0001635 Sechium edule HOM05D003453 ORTHO05D004154 1.8e-36 157.5 269 57.2
Os04g0605300 Oryza sativa ssp. japonica HOM05D003453 ORTHO05D004154 7.7e-35 152.1 322 63.4
ECA236G3452 Erigeron canadensis HOM05D003453 ORTHO05D004154 6.6e-34 149.1 325 60.6
Lju50A41T23 Lonicera japonica HOM05D003453 ORTHO05D004154 1.9e-33 147.5 149 69.1
Lju50A42T20 Lonicera japonica HOM05D003453 ORTHO05D004154 1.9e-33 147.5 149 69.1
Aa31LG3G390 Aethionema arabicum HOM05D003453 ORTHO05D004154 1.2e-32 144.8 330 50.6
Lsat_1_v5_gn_8_68380 Lactuca sativa HOM05D003453 ORTHO05D004154 1.6e-32 144.4 320 58.1
Lju432C7T0 Lonicera japonica HOM05D003453 ORTHO05D004154 2.1e-32 144.1 149 68.5
ATR0580G242 Amborella trichopoda HOM05D003453 ORTHO05D004154 5.2e-31 139.4 333 58.0
Aa31LG2G20670 Aethionema arabicum HOM05D003453 ORTHO05D004154 8.9e-31 138.7 165 62.4
AUR62031265 Chenopodium quinoa HOM05D003453 ORTHO05D004154 2.4e-28 130.6 168 65.5
Zm00001eb071570 Zea mays HOM05D003453 ORTHO05D004154 3.2e-28 130.2 325 61.2
Nitab4.5_0001335g0020 Nicotiana tabacum HOM05D003453 ORTHO05D004154 5.4e-28 129.4 366 41.3
Actinidia29966 Actinidia chinensis HOM05D003453 ORTHO05D004154 1.1e-25 121.7 93 72.0
PGR018G0002 Punica granatum HOM05D003453 ORTHO05D004154 1.1e-25 121.7 349 53.3
PGR142G3132 Punica granatum HOM05D003453 ORTHO05D004154 1.1e-25 121.7 349 53.3
PGR142G4131 Punica granatum HOM05D003453 ORTHO05D004154 1.1e-25 121.7 349 53.3
MSTRG.19360 Avicennia marina HOM05D003453 ORTHO05D004154 6.2e-24 115.9 150 65.3
MBI14_g10728_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 4.0e-23 113.2 159 62.9
SHI33663 Sapria himalayana HOM05D003453 ORTHO05D004154 1.7e-21 107.8 158 55.7
vmacro22287 Vaccinium macrocarpon HOM05D003453 ORTHO05D004154 1.4e-20 104.8 147 66.7
CDE04G2437 Ceratophyllum demersum HOM05D002648 ORTHO05D002899 7.8e-19 99.0 281 58.0
MELO3C029529.2 Cucumis melo HOM05D003453 ORTHO05D004154 1.3e-18 98.2 83 62.7
Sc14g0003130 Simmondsia chinensis HOM05D003453 ORTHO05D004154 1.1e-15 88.6 350 54.6
SpUn0235_0010 Schrenkiella parvula HOM05D003453 ORTHO05D004154 3.1e-15 87.0 237 65.8
BcaB08g34854 Brassica carinata HOM05D003453 ORTHO05D004154 1.7e-13 81.3 116 61.2
BraA07t29361Z Brassica rapa HOM05D003453 ORTHO05D042392 1.1e-09 68.6 60 65.0
HPP92_010787 Vanilla planifolia HOM05D003453 ORTHO05D004154 1.1e-09 68.6 332 45.8
SEGI_15755 Sequoiadendron giganteum HOM05D003453 ORTHO05D004154 2.0e-06 57.8 321 48.3


User provided reference genes

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