Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.1e-92 343.2 161 100.0
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.1e-92 343.2 161 100.0
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 4.7e-88 327.8 161 93.8
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 4.0e-87 324.7 161 93.8
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 1.5e-81 306.2 161 87.6
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 4.7e-80 301.2 160 83.8
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 8.1e-80 300.4 161 86.3
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 1.1e-79 300.1 161 85.7
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 1.8e-79 299.3 161 85.1
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 2.6e-78 295.4 161 83.2
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 3.4e-78 295.0 160 84.4
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 4.4e-78 294.7 160 84.4
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 4.4e-78 294.7 161 83.9
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 7.5e-78 293.9 161 84.5
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.3e-77 293.1 158 84.2
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 2.9e-77 292.0 161 82.6
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 3.7e-77 291.6 160 82.5
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.4e-76 289.7 158 83.5
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 4.1e-76 288.1 161 81.4
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 5.4e-76 287.7 152 86.8
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 5.4e-76 287.7 158 82.9
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 5.4e-76 287.7 162 82.7
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 5.4e-76 287.7 161 81.4
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 7.1e-76 287.3 161 82.6
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.6e-75 286.2 159 83.0
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 1.6e-75 286.2 159 83.0
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 2.7e-75 285.4 161 81.4
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.7e-75 285.4 157 82.8
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 2.7e-75 285.4 161 81.4
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 3.5e-75 285.0 157 82.2
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 6.0e-75 284.3 159 82.4
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 6.0e-75 284.3 161 78.9
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 7.8e-75 283.9 161 78.9
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 7.8e-75 283.9 161 78.9
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 7.8e-75 283.9 161 78.9
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.3e-74 283.1 158 79.7
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 3.0e-74 282.0 158 80.4
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 3.9e-74 281.6 154 83.8
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 5.1e-74 281.2 158 79.1
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 5.1e-74 281.2 160 80.0
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 8.6e-74 280.4 161 81.4
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 8.6e-74 280.4 161 78.9
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.3e-73 278.5 161 77.6
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 3.3e-73 278.5 160 80.6
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.3e-73 278.5 160 80.6
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.3e-73 278.5 160 80.6
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 4.3e-73 278.1 154 83.8
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 5.6e-73 277.7 158 78.5
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 5.6e-73 277.7 161 78.3
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 5.6e-73 277.7 157 80.3
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 7.3e-73 277.3 161 76.4
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 7.3e-73 277.3 161 76.4
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.1e-72 275.8 153 82.4
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 3.6e-72 275.0 154 78.6
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 3.6e-72 275.0 162 77.8
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 4.7e-72 274.6 161 78.9
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 6.2e-72 274.2 161 75.8
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 6.2e-72 274.2 161 75.8
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 8.1e-72 273.9 161 75.2
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 8.1e-72 273.9 161 75.2
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 1.1e-71 273.5 161 75.2
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 1.4e-71 273.1 161 74.5
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 1.8e-71 272.7 161 76.4
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.8e-71 272.7 161 74.5
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 1.8e-71 272.7 155 77.4
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.4e-71 272.3 149 84.6
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 2.4e-71 272.3 161 75.2
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 4.0e-71 271.6 161 75.8
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 4.0e-71 271.6 161 74.5
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 4.0e-71 271.6 155 77.4
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 5.2e-71 271.2 161 75.2
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 5.2e-71 271.2 161 76.4
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 6.8e-71 270.8 162 78.4
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 2.0e-70 269.2 161 75.2
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 2.6e-70 268.9 161 73.9
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 3.4e-70 268.5 161 73.3
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.3e-69 266.5 161 77.0
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 1.3e-69 266.5 157 78.3
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 2.2e-69 265.8 169 71.6
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 8.4e-69 263.8 166 71.7
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 8.4e-69 263.8 159 73.0
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 3.2e-68 261.9 160 75.0
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 1.2e-67 260.0 152 75.0
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 1.2e-67 260.0 162 74.7
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 3.5e-67 258.5 158 74.7
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 3.5e-67 258.5 148 81.8
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 4.6e-67 258.1 214 57.9
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 7.8e-67 257.3 161 76.4
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 3.9e-66 255.0 153 73.2
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 2.5e-65 252.3 162 71.6
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 3.3e-65 251.9 161 73.9
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 4.3e-65 251.5 153 71.9
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 2.8e-64 248.8 158 69.6
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 8.1e-64 247.3 137 81.8
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 1.1e-63 246.9 153 71.9
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 6.9e-63 244.2 157 67.5
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 4.4e-62 241.5 152 69.7
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 9.9e-62 240.4 135 78.5
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 4.9e-61 238.0 140 77.1
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 4.9e-61 238.0 135 77.0
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 7.1e-60 234.2 138 78.3
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 9.3e-60 233.8 152 73.7
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 2.3e-58 229.2 139 77.7
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 6.6e-58 227.6 138 73.2
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.4e-55 219.9 117 83.8
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 6.9e-55 217.6 140 71.4
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 2.2e-53 212.6 188 56.9
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 1.2e-51 206.8 114 80.7
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 4.6e-51 204.9 142 61.3
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 4.6e-51 204.9 121 78.5
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.5e-49 199.9 118 77.1
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 1.9e-49 199.5 145 58.6
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.3e-49 198.7 157 63.7
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 3.3e-49 198.7 142 59.9
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 2.1e-48 196.1 114 78.1
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 8.1e-48 194.1 158 60.8
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.4e-44 183.3 132 63.6
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 6.0e-43 177.9 96 79.2
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 3.0e-42 175.6 95 82.1
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 8.2e-40 167.5 102 69.6
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 4.9e-37 158.3 171 47.4
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.4e-36 156.8 85 83.5
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 2.5e-36 156.0 137 59.1
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 3.2e-36 155.6 157 53.5
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 3.5e-35 152.1 86 80.2
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 3.6e-27 125.6 73 79.5
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 2.1e-19 99.8 54 81.5
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 2.9e-13 79.3 60 61.7
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 7.7e-06 54.7 72 38.9


User provided reference genes

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