Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 0.0e+00 1536.5 776 100.0
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 0.0e+00 1284.6 936 73.5
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 0.0e+00 1094.3 769 74.0
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 0.0e+00 1083.2 753 72.4
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 4.9e-300 1034.2 762 70.2
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 2.5e-296 1021.9 776 69.1
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 2.6e-293 1011.9 783 69.1
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 9.9e-293 1010.0 759 68.8
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 4.9e-292 1007.7 837 64.5
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 5.3e-286 987.6 777 68.9
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 6.5e-268 927.5 574 82.9
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 1.8e-217 760.0 567 70.2
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 4.6e-213 745.3 785 51.8
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 2.8e-194 682.9 751 49.3
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 6.2e-194 681.8 783 48.7
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 1.8e-193 680.2 793 49.1
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 3.1e-193 679.5 781 48.5
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 8.4e-191 671.4 781 48.8
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 1.1e-190 671.0 901 44.5
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 2.7e-189 666.4 736 48.8
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 1.6e-186 657.1 739 47.9
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 9.0e-185 651.4 793 46.9
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 9.9e-184 647.9 783 47.0
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 3.9e-180 636.0 781 46.0
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 3.9e-180 636.0 781 45.7
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.6e-178 630.6 736 46.5
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 2.8e-178 629.8 736 46.2
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.1e-177 627.9 736 46.1
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 3.4e-176 622.9 787 47.4
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 1.4e-174 617.5 767 44.6
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 2.4e-174 616.7 453 69.1
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 1.3e-170 604.4 602 51.0
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 1.4e-169 600.9 755 45.8
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 3.4e-168 596.3 784 44.4
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 5.8e-168 595.5 789 44.2
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 1.0e-167 594.7 754 46.4
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 2.9e-167 593.2 750 45.7
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 1.8e-164 583.9 840 42.3
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 1.5e-163 580.9 696 46.0
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 1.9e-163 580.5 773 44.0
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 7.4e-163 578.6 599 49.1
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 4.1e-161 572.8 769 43.2
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 4.5e-160 569.3 794 43.2
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 4.2e-158 562.8 769 43.8
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 2.1e-157 560.5 717 44.5
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 1.0e-156 558.1 593 53.3
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 7.4e-155 552.0 767 42.5
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 4.1e-153 546.2 531 52.2
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 6.9e-153 545.4 781 43.1
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 1.5e-152 544.3 793 41.9
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 2.6e-152 543.5 815 41.2
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 4.5e-152 542.7 789 41.1
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 3.8e-151 539.7 802 43.0
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 1.0e-143 515.0 752 40.8
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 4.7e-141 506.1 721 43.0
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 1.4e-140 504.6 761 41.0
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 3.5e-136 490.0 741 40.6
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 5.5e-134 482.6 523 48.6
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 2.7e-133 480.3 806 39.2
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 6.1e-133 479.2 762 39.5
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 3.4e-123 446.8 674 39.5
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 7.7e-120 435.6 556 45.5
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 3.8e-111 406.8 505 47.5
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 6.6e-103 379.4 437 46.0
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 1.6e-101 374.8 803 35.1
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 3.1e-100 370.5 772 34.1
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 2.6e-99 367.5 501 41.5
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 4.4e-99 366.7 395 48.9
Glyma.13G102550 Glycine max HOM05D007669 ORTHO05D009624 1.3e-98 365.2 273 77.3
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 3.0e-95 354.0 402 47.5
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 3.9e-87 327.0 593 34.1
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 5.6e-86 323.2 496 39.5
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 1.3e-74 285.4 774 29.8
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 4.9e-74 283.5 763 29.1
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 3.2e-65 254.2 805 28.9
FAN12G2799 Fragaria x ananassa HOM05D007669 ORTHO05D009624 5.4e-65 253.4 252 51.2
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 6.0e-64 250.0 374 36.4
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 8.4e-58 229.6 139 79.1
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 1.6e-56 225.3 864 25.1
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 2.8e-53 214.5 393 34.6
Haze_22064 Corylus avellana HOM05D007669 ORTHO05D009624 2.1e-48 198.4 199 51.8
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 8.2e-45 186.4 198 48.0
COL.COLO4_25058 Corchorus olitorius HOM05D007669 ORTHO05D009624 3.2e-33 147.9 165 47.3
DCAR_017991 Daucus carota HOM05D007669 ORTHO05D009624 3.6e-32 144.4 201 39.3
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 9.4e-25 119.8 88 67.0
Haze_22063 Corylus avellana HOM05D007669 ORTHO05D009624 3.9e-23 114.4 151 50.3
Lj3A156T43 Lonicera japonica HOM05D007669 ORTHO05D009624 8.8e-15 86.7 171 38.6
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 1.7e-13 82.4 107 44.9
COL.COLO4_25059 Corchorus olitorius HOM05D007669 ORTHO05D009624 1.4e-12 79.3 165 38.8
Pp3c25_1540 Physcomitrium patens HOM05D024043 ORTHO05D031244 9.1e-12 76.6 167 32.3
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 1.2e-11 76.3 119 40.3
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 1.6e-11 75.9 106 41.5
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 1.5e-09 69.3 106 39.6
AagrBONN_evm.TU.Sc2ySwM_369.230 Anthoceros agrestis HOM05D024043 ORTHO05D031244 4.2e-09 67.8 112 35.7
Mapoly0004s0046 Marchantia polymorpha HOM05D024043 ORTHO05D031244 4.2e-09 67.8 113 36.3
CiPaw.08G030600 Carya illinoinensis HOM05D007669 ORTHO05D009624 2.0e-06 58.9 55 47.3
Aqoxy7G02843 Aquilegia oxysepala HOM05D000073 ORTHO05D000033 5.7e-06 57.4 91 36.3
Os04g0659150 Oryza sativa ssp. japonica HOM05D007669 ORTHO05D009624 9.8e-06 56.6 114 34.2


User provided reference genes

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