Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G135700 Phaseolus vulgaris HOM05D004059 ORTHO05D004591 3.2e-262 907.9 471 100.0
VMungo1215G3226 Vigna mungo HOM05D004059 ORTHO05D004591 7.9e-160 567.8 496 65.7
VMungo1215G0279 Vigna mungo HOM05D004059 ORTHO05D004591 4.5e-155 552.0 498 63.9
Glyma.17G054000 Glycine max HOM05D004059 ORTHO05D004591 2.1e-120 436.8 513 54.6
VMungo1309G0851 Vigna mungo HOM05D004059 ORTHO05D004591 9.5e-105 384.8 508 48.6
Glyma.09G064200 Glycine max HOM05D004059 ORTHO05D004591 1.4e-100 370.9 523 47.6
Phvul.009G231600 Phaseolus vulgaris HOM05D004059 ORTHO05D004591 9.5e-97 358.2 496 47.0
Glyma.15G170500 Glycine max HOM05D004059 ORTHO05D004591 1.7e-93 347.4 485 48.9
Lj6g0002908 Lotus japonicus HOM05D004059 ORTHO05D004591 9.2e-92 341.7 513 45.8
Medtr2g039620 Medicago truncatula HOM05D004059 ORTHO05D004591 4.4e-86 322.8 515 43.9
Lj4g0028074 Lotus japonicus HOM05D004059 ORTHO05D004591 7.6e-86 322.0 490 45.9
TPR.G13416 Trifolium pratense HOM05D004059 ORTHO05D004591 1.2e-83 314.7 520 43.5
Psat1g140200 Pisum sativum HOM05D004059 ORTHO05D004591 2.2e-77 293.9 518 41.5
CiPaw.03G214200 Carya illinoinensis HOM05D004059 ORTHO05D004591 3.8e-77 293.1 515 41.7
Cfa003070 Carpinus fangiana HOM05D004059 ORTHO05D004591 2.9e-69 266.9 511 38.4
QL02p062365 Quercus lobata HOM05D004059 ORTHO05D004591 5.4e-68 262.7 507 38.5
Haze_25925 Corylus avellana HOM05D004059 ORTHO05D004591 1.0e-66 258.5 523 37.7
MD02G1081600 Malus domestica HOM05D004059 ORTHO05D004591 3.0e-66 256.9 548 36.9
Dinv36776 Davidia involucrata HOM05D004059 ORTHO05D004591 9.6e-65 251.9 511 36.2
Prupe.7G207500 Prunus persica HOM05D004059 ORTHO05D004591 2.1e-64 250.8 554 36.5
TAR624G0558 Trochodendron aralioides HOM05D004059 ORTHO05D004591 6.2e-64 249.2 509 37.7
Duzib187G0197 Durio zibethinus HOM05D004059 ORTHO05D004591 3.8e-61 240.0 516 37.0
FAN19G2456 Fragaria x ananassa HOM05D004059 ORTHO05D004591 6.4e-61 239.2 557 35.5
FvH4_1g07710 Fragaria vesca HOM05D004059 ORTHO05D004591 8.4e-61 238.8 555 36.0
RcHm_v2.0_Chr2g0093571 Rosa chinensis HOM05D004059 ORTHO05D004591 2.1e-59 234.2 561 35.8
FAN26G1668 Fragaria x ananassa HOM05D004059 ORTHO05D004591 1.3e-58 231.5 562 35.9
arahy.Tifrunner.gnm1.ann1.H4FASW Arachis hypogaea HOM05D004059 ORTHO05D004591 2.3e-58 230.7 478 40.0
FAN26G3139 Fragaria x ananassa HOM05D004059 ORTHO05D004591 2.3e-58 230.7 562 35.9
Thecc.09G087400 Theobroma cacao HOM05D004059 ORTHO05D004591 2.3e-58 230.7 515 35.9
FAN23G2659 Fragaria x ananassa HOM05D004059 ORTHO05D004591 8.7e-58 228.8 561 34.8
Cc06_g11520 Coffea canephora HOM05D004059 ORTHO05D004591 3.3e-57 226.9 537 35.4
FAN28G1400 Fragaria x ananassa HOM05D004059 ORTHO05D004591 7.4e-57 225.7 563 35.9
Hma1.2p1_1838F.1_g304870 Hydrangea macrophylla HOM05D004059 ORTHO05D004591 1.3e-56 224.9 503 34.8
arahy.Tifrunner.gnm1.ann1.0BQ45N Arachis hypogaea HOM05D004059 ORTHO05D004591 1.6e-56 224.6 517 36.8
Potri.006G148800 Populus trichocarpa HOM05D004059 ORTHO05D004591 8.2e-56 222.2 576 33.0
Atru.chr7.1612 Acer truncatum HOM05D004059 ORTHO05D004591 4.0e-55 219.9 532 35.7
MD15G1208900 Malus domestica HOM05D004059 ORTHO05D004591 9.0e-55 218.8 549 35.7
GSVIVG01015189001 Vitis vinifera HOM05D004059 ORTHO05D004591 9.0e-55 218.8 513 34.7
Sed0008144 Sechium edule HOM05D004059 ORTHO05D004591 1.5e-54 218.0 529 33.8
Sabra06G0117700 Salix brachista HOM05D004059 ORTHO05D004591 2.0e-54 217.6 562 34.2
TWI34G0199 Tripterygium wilfordii HOM05D004059 ORTHO05D004591 1.7e-53 214.5 517 34.2
PGR102G2684 Punica granatum HOM05D004059 ORTHO05D004591 2.2e-53 214.2 528 35.2
CSS0003764 Camellia sinensis var. sinensis HOM05D004059 ORTHO05D004591 3.8e-53 213.4 466 35.8
TAR636G3314 Trochodendron aralioides HOM05D004059 ORTHO05D004591 1.4e-52 211.5 509 33.6
Oeu017604.1 Olea europaea HOM05D004059 ORTHO05D004591 5.5e-52 209.5 525 33.5
Duzib168G0233 Durio zibethinus HOM05D004059 ORTHO05D004591 2.1e-51 207.6 551 33.2
Glyma.13G105400 Glycine max HOM05D004059 ORTHO05D004591 2.7e-51 207.2 275 50.2
arahy.Tifrunner.gnm1.ann1.MX4JUX Arachis hypogaea HOM05D004059 ORTHO05D004591 3.5e-51 206.8 516 35.9
Eucgr.C03476 Eucalyptus grandis HOM05D004059 ORTHO05D004591 4.6e-51 206.5 536 32.8
Manes.16G101000 Manihot esculenta HOM05D004059 ORTHO05D004591 2.3e-50 204.1 548 33.6
Nn6g35501 Nelumbo nucifera HOM05D004059 ORTHO05D004591 3.9e-50 203.4 518 32.8
Lalb_Chr08g0232291 Lupinus albus HOM05D004059 ORTHO05D004591 1.9e-49 201.1 382 42.1
Rhsim03G0231600 Rhododendron simsii HOM05D004059 ORTHO05D004591 3.3e-49 200.3 556 33.6
DCAR_011967 Daucus carota HOM05D004059 ORTHO05D004591 4.3e-49 199.9 504 33.5
Actinidia29906 Actinidia chinensis HOM05D004059 ORTHO05D004591 2.8e-48 197.2 467 35.3
ECA240G1274 Erigeron canadensis HOM05D004059 ORTHO05D004591 2.8e-48 197.2 508 33.7
Gohir.D07G011700 Gossypium hirsutum HOM05D004059 ORTHO05D004591 8.2e-48 195.7 506 31.8
CSS0005796 Camellia sinensis var. sinensis HOM05D004059 ORTHO05D004591 1.4e-47 194.9 514 33.1
Gorai.001G012400 Gossypium raimondii HOM05D004059 ORTHO05D004591 1.5e-46 191.4 512 31.8
CAN.G52.7 Capsicum annuum HOM05D004059 ORTHO05D004591 3.4e-46 190.3 522 30.1
Lalb_Chr11g0074551 Lupinus albus HOM05D004059 ORTHO05D004591 4.5e-46 189.9 383 41.5
Solyc07g039570.3 Solanum lycopersicum HOM05D004059 ORTHO05D004591 2.9e-45 187.2 522 32.4
HanXRQChr03g0060341 Helianthus annuus HOM05D004059 ORTHO05D004591 6.5e-45 186.0 510 33.3
ClCG03G015470 Citrullus lanatus HOM05D004059 ORTHO05D004591 1.4e-44 184.9 522 30.8
Nitab4.5_0006053g0020 Nicotiana tabacum HOM05D004059 ORTHO05D004591 5.5e-44 183.0 533 29.8
CsaV3_1G040580 Cucumis sativus L. HOM05D004059 ORTHO05D004591 9.4e-44 182.2 484 34.1
Ciclev10007937m.g Citrus clementina HOM05D004059 ORTHO05D004591 2.1e-43 181.0 536 31.5
vmacro06298 Vaccinium macrocarpon HOM05D004059 ORTHO05D004591 2.7e-43 180.6 484 32.2
Manes.03G034700 Manihot esculenta HOM05D004059 ORTHO05D004591 4.6e-43 179.9 512 31.2
Aqoxy7G04020 Aquilegia oxysepala HOM05D004059 ORTHO05D004591 6.1e-43 179.5 519 30.3
Nn8g38830 Nelumbo nucifera HOM05D004059 ORTHO05D004591 6.1e-43 179.5 519 30.1
Migut.J00583 Erythranthe guttata HOM05D004059 ORTHO05D004591 2.3e-42 177.6 507 31.0
MELO3C015488.2 Cucumis melo HOM05D004059 ORTHO05D004591 3.0e-42 177.2 478 32.8
AT5G56960 Arabidopsis thaliana HOM05D004059 ORTHO05D004591 1.1e-41 175.3 514 32.3
Gohir.A05G030300 Gossypium hirsutum HOM05D004059 ORTHO05D004591 1.1e-41 175.3 516 30.6
Sopen07g018910 Solanum pennellii HOM05D004059 ORTHO05D004591 1.3e-40 171.8 461 33.2
THA.LOC104818114 Tarenaya hassleriana HOM05D004059 ORTHO05D004591 1.7e-40 171.4 492 31.1
AUR62029052 Chenopodium quinoa HOM05D004059 ORTHO05D004591 2.8e-40 170.6 527 30.7
PSO210G4563 Papaver somniferum HOM05D004059 ORTHO05D004591 2.8e-40 170.6 537 29.6
Gohir.D05G031700 Gossypium hirsutum HOM05D004059 ORTHO05D004591 3.7e-40 170.2 516 30.2
Nitab4.5_0002593g0060 Nicotiana tabacum HOM05D004059 ORTHO05D004591 6.3e-40 169.5 518 29.2
BolC2t07605H Brassica oleracea HOM05D004059 ORTHO05D004591 1.1e-39 168.7 523 29.3
SGA_v2.0_scaffold62G21623 Striga asiatica HOM05D004059 ORTHO05D004591 1.4e-39 168.3 520 30.0
PSO210G1620 Papaver somniferum HOM05D004059 ORTHO05D004591 3.1e-39 167.2 557 29.8
Gorai.009G031900 Gossypium raimondii HOM05D004059 ORTHO05D004591 1.2e-38 165.2 514 29.6
vmacro17254 Vaccinium macrocarpon HOM05D004059 ORTHO05D004591 1.5e-38 164.9 460 32.2
MBI01_g09949_MAGBIO Magnolia biondii HOM05D004059 ORTHO05D004591 2.6e-38 164.1 451 33.9
AUR62033947 Chenopodium quinoa HOM05D004059 ORTHO05D004591 1.3e-37 161.8 529 29.7
SalBow6G2434 Salvia bowleyana HOM05D004059 ORTHO05D004591 5.0e-37 159.8 507 29.2
BraA02t05954Z Brassica rapa HOM05D004059 ORTHO05D004591 6.5e-37 159.5 520 29.4
SGA_v2.0_scaffold23G10028 Striga asiatica HOM05D004059 ORTHO05D004591 1.1e-36 158.7 500 31.2
CiPaw.04G148500 Carya illinoinensis HOM05D004059 ORTHO05D004591 4.2e-36 156.8 371 36.7
Rhsim05G0018600 Rhododendron simsii HOM05D004059 ORTHO05D004591 4.2e-36 156.8 469 31.8
BcaC03g14194 Brassica carinata HOM05D004059 ORTHO05D004591 5.5e-36 156.4 523 28.5
C02p14760 Brassica napus HOM05D004059 ORTHO05D004591 5.5e-36 156.4 523 28.5
EL10Ac8g19192 Beta vulgaris HOM05D004059 ORTHO05D004591 2.7e-35 154.1 521 28.6
Carub.0008s1744 Capsella rubella HOM05D004059 ORTHO05D004591 1.4e-34 151.8 526 30.0
MBI04_g36310_MAGBIO Magnolia biondii HOM05D004059 ORTHO05D004591 1.4e-34 151.8 493 31.0
Gohir.D06G071950 Gossypium hirsutum HOM05D004059 ORTHO05D004591 6.7e-34 149.4 512 29.7
Gorai.010G083900 Gossypium raimondii HOM05D004059 ORTHO05D004591 1.3e-32 145.2 478 29.3
Lj7A677T52 Lonicera japonica HOM05D004059 ORTHO05D004591 1.3e-32 145.2 395 35.2
Lsat_1_v5_gn_7_36701 Lactuca sativa HOM05D004059 ORTHO05D004591 8.2e-32 142.5 465 31.0
Thhalv10013360m.g Eutrema salsugineum HOM05D004059 ORTHO05D004591 1.8e-31 141.4 480 29.0
unitig_749.g14229 Utricularia gibba HOM05D004059 ORTHO05D004591 3.1e-31 140.6 500 30.2
Actinidia38450 Actinidia chinensis HOM05D004059 ORTHO05D004591 4.1e-31 140.2 232 43.5
Cpa.g.sc61.16 Carica papaya HOM05D004059 ORTHO05D004591 2.0e-30 137.9 499 30.1
Peaxi162Scf00028g00036 Petunia axillaris HOM05D004059 ORTHO05D004591 3.5e-30 137.1 500 27.2
Lj4C294G8 Lonicera japonica HOM05D004059 ORTHO05D004591 4.5e-30 136.7 485 30.9
A02p08850 Brassica napus HOM05D004059 ORTHO05D004591 1.7e-29 134.8 515 26.8
CANSAT56G2242 Cannabis sativa HOM05D004059 ORTHO05D004591 2.2e-29 134.4 641 25.7
DCAR_031333 Daucus carota HOM05D004059 ORTHO05D004591 2.2e-29 134.4 520 27.1
Gohir.A07G011900 Gossypium hirsutum HOM05D004059 ORTHO05D004591 2.9e-29 134.0 382 31.9
COL.COLO4_18190 Corchorus olitorius HOM05D004059 ORTHO05D004591 3.2e-28 130.6 443 28.7
AL8G32820 Arabidopsis lyrata HOM05D004059 ORTHO05D004591 4.2e-28 130.2 487 29.2
Aa31LG3G12850 Aethionema arabicum HOM05D004059 ORTHO05D004591 1.2e-27 128.6 501 27.9
C09p48620 Brassica napus HOM05D004059 ORTHO05D004591 8.0e-27 125.9 501 27.3
Sc08g0008540 Simmondsia chinensis HOM05D004059 ORTHO05D004591 6.7e-26 122.9 507 25.6
ATR0749G078 Amborella trichopoda HOM05D004059 ORTHO05D004591 5.7e-25 119.8 477 29.8
Dinv42328 Davidia involucrata HOM05D004059 ORTHO05D004591 2.6e-22 110.9 222 40.5
Hma1.2p1_0672F.1_g201130 Hydrangea macrophylla HOM05D004059 ORTHO05D004591 1.0e-21 109.0 109 55.0
PGSC0003DMG400022043 Solanum tuberosum HOM05D004059 ORTHO05D004591 1.5e-20 105.1 367 31.6
BcaB05g22300 Brassica carinata HOM05D004059 ORTHO05D004591 2.1e-19 101.3 443 27.8
Hund25946 Selenicereus undatus HOM05D004059 ORTHO05D004591 2.1e-19 101.3 374 30.2
TAR383G1057 Trochodendron aralioides HOM05D004059 ORTHO05D004591 5.2e-18 96.7 409 27.4
CARHR270700 Cardamine hirsuta HOM05D004059 ORTHO05D004591 8.8e-18 95.9 486 26.1
Peaxi162Scf00498g00042 Petunia axillaris HOM05D004059 ORTHO05D004591 1.5e-17 95.1 354 31.6
HPP92_026782 Vanilla planifolia HOM05D004059 ORTHO05D004591 1.4e-15 88.6 425 28.2
HanXRQChr09g0238101 Helianthus annuus HOM05D004059 ORTHO05D004591 5.4e-15 86.7 370 31.4
Lj4C294T9 Lonicera japonica HOM05D004059 ORTHO05D004591 2.7e-14 84.3 361 28.5
MELO3C004627.2 Cucumis melo HOM05D004059 ORTHO05D004591 3.5e-14 84.0 510 23.9
PGSC0003DMG400000335 Solanum tuberosum HOM05D000597 ORTHO05D004591 4.5e-14 83.6 254 31.9
ClCG11G001730 Citrullus lanatus HOM05D004059 ORTHO05D004591 1.7e-13 81.6 489 23.1
Zm00001eb240050 Zea mays HOM05D004059 ORTHO05D004591 2.9e-13 80.9 391 25.6
Sp6g18670 Schrenkiella parvula HOM05D004059 ORTHO05D004591 1.9e-12 78.2 156 37.2
unitig_78.g29617 Utricularia gibba HOM05D004059 ORTHO05D004591 2.1e-11 74.7 356 28.1
THA.LOC104811746 Tarenaya hassleriana HOM05D004059 ORTHO05D004591 4.7e-11 73.6 252 27.4
BolC9t57705H Brassica oleracea HOM05D004059 ORTHO05D004591 1.4e-10 72.0 121 35.5
Peaxi162Scf00498g00054 Petunia axillaris HOM05D004059 ORTHO05D004591 1.8e-10 71.6 253 32.4
Sed0000136 Sechium edule HOM05D004059 ORTHO05D004591 6.8e-10 69.7 107 37.4
BcaC04g20035 Brassica carinata HOM05D004059 ORTHO05D004591 1.2e-09 68.9 412 25.2
CsaV3_2G001440 Cucumis sativus L. HOM05D004059 ORTHO05D004591 1.5e-09 68.6 473 23.7
Actinidia38451 Actinidia chinensis HOM05D004059 ORTHO05D004591 2.0e-09 68.2 152 32.9
CDE04G0617 Ceratophyllum demersum HOM05D004059 ORTHO05D004591 2.6e-09 67.8 376 23.9
BcaB08g36035 Brassica carinata HOM05D004059 ORTHO05D004591 4.4e-09 67.0 426 23.0
BolC9t57704H Brassica oleracea HOM05D004059 ORTHO05D004591 4.1e-07 60.5 369 25.7
Peaxi162Scf00498g00056 Petunia axillaris HOM05D004059 ORTHO05D004591 4.1e-07 60.5 352 27.6
CAN.G1583.1 Capsicum annuum HOM05D000597 ORTHO05D004591 2.7e-06 57.8 149 32.2
CDE06G2535 Ceratophyllum demersum HOM05D004059 ORTHO05D004591 2.7e-06 57.8 242 24.8
Dinv42329 Davidia involucrata HOM05D004059 ORTHO05D004591 2.7e-06 57.8 155 32.3
Peaxi162Scf00498g00537 Petunia axillaris HOM05D000597 ORTHO05D004591 5.9e-06 56.6 205 30.2
CAN.G3656.1 Capsicum annuum HOM05D004059 ORTHO05D004591 7.7e-06 56.2 354 25.7


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