Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 3.4e-103 378.3 178 100.0
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 1.6e-81 306.2 175 83.4
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 3.4e-47 192.2 166 60.8
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 3.8e-46 188.7 177 59.9
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 2.8e-33 146.0 175 49.7
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 4.1e-32 142.1 181 46.4
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 1.2e-31 140.6 181 48.6
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 4.2e-29 132.1 188 45.2
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 4.6e-28 128.6 178 44.9
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 6.1e-28 128.3 201 44.3
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 3.0e-27 125.9 169 48.5
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 3.3e-26 122.5 192 40.1
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 5.7e-26 121.7 208 38.5
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 7.4e-26 121.3 178 41.6
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 4.8e-25 118.6 184 41.8
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 1.4e-24 117.1 207 40.1
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 1.8e-24 116.7 177 46.3
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 6.9e-24 114.8 208 41.8
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 2.0e-23 113.2 198 35.4
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 7.7e-23 111.3 202 42.1
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 2.2e-22 109.8 185 36.2
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 2.9e-22 109.4 164 42.7
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 3.8e-22 109.0 166 42.2
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 3.8e-22 109.0 181 39.2
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 1.4e-21 107.1 196 38.8
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.9e-21 106.7 198 40.4
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 9.4e-21 104.4 198 39.9
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 9.4e-21 104.4 190 40.5
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.2e-20 104.0 188 42.6
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.6e-20 103.6 202 40.6
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 6.1e-20 101.7 180 40.6
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 1.0e-19 100.9 199 37.7
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 6.7e-19 98.2 183 39.3
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 6.7e-19 98.2 183 36.6
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 8.8e-19 97.8 189 38.6
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 8.8e-19 97.8 184 38.6
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 3.3e-18 95.9 203 34.5
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 4.4e-18 95.5 200 34.5
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 9.7e-18 94.4 181 39.2
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 1.3e-17 94.0 178 39.9
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 2.2e-17 93.2 179 38.0
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.2e-17 93.2 189 35.4
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 2.8e-17 92.8 199 35.7
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 8.2e-17 91.3 172 34.9
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 1.1e-16 90.9 184 38.6
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.1e-16 90.9 189 34.9
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 1.4e-16 90.5 189 35.4
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 6.9e-16 88.2 206 36.4
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 9.1e-16 87.8 181 34.8
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 1.5e-15 87.0 180 38.9
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 3.4e-15 85.9 190 36.8
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 3.4e-15 85.9 180 37.8
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.4e-15 85.9 181 35.4
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 3.4e-15 85.9 191 36.6
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 4.5e-15 85.5 191 36.1
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 4.5e-15 85.5 183 36.6
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 4.5e-15 85.5 190 36.3
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.0e-14 84.3 214 28.0
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 1.7e-14 83.6 178 34.8
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.7e-14 83.6 212 35.4
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 2.2e-14 83.2 192 32.8
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 2.2e-14 83.2 202 34.7
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 2.2e-14 83.2 220 28.6
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 2.9e-14 82.8 185 36.8
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 2.9e-14 82.8 185 36.8
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 3.8e-14 82.4 196 34.2
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 5.0e-14 82.0 179 35.2
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 5.0e-14 82.0 206 35.4
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 5.0e-14 82.0 192 31.2
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 6.5e-14 81.6 185 36.2
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 6.5e-14 81.6 185 36.2
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 8.5e-14 81.3 194 35.1
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 1.1e-13 80.9 185 33.0
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 1.1e-13 80.9 194 34.5
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 1.9e-13 80.1 186 36.6
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 1.9e-13 80.1 184 35.3
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 2.5e-13 79.7 194 34.5
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 3.2e-13 79.3 186 33.9
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 3.2e-13 79.3 180 36.7
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 3.2e-13 79.3 191 33.5
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 5.5e-13 78.6 207 35.7
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 5.5e-13 78.6 209 34.9
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 7.2e-13 78.2 187 35.8
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 9.4e-13 77.8 192 34.9
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 9.4e-13 77.8 192 34.9
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 1.2e-12 77.4 182 33.5
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 1.6e-12 77.0 211 32.2
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 3.6e-12 75.9 165 35.2
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 4.7e-12 75.5 182 33.0
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 4.7e-12 75.5 182 33.0
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 8.0e-12 74.7 190 33.7
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.0e-11 74.3 167 36.5
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.4e-11 73.9 174 34.5
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 3.9e-11 72.4 199 35.2
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 3.9e-11 72.4 199 35.2
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 6.7e-11 71.6 184 29.9
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 6.7e-11 71.6 198 33.3
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 8.8e-11 71.2 221 29.4
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 3.3e-10 69.3 172 33.7
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 5.7e-10 68.6 182 32.4
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 7.4e-10 68.2 94 43.6
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 7.4e-10 68.2 200 30.5
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 1.3e-09 67.4 209 30.6
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.7e-09 67.0 187 33.2
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 2.8e-09 66.2 180 35.0
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 4.8e-09 65.5 187 32.1
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 1.4e-08 63.9 205 28.8
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 4.1e-08 62.4 180 31.7
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 7.0e-08 61.6 220 29.1
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 1.2e-07 60.8 214 28.0
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.6e-07 60.5 217 30.0
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 2.0e-07 60.1 197 31.5
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 2.6e-07 59.7 200 28.5
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 5.9e-07 58.5 207 29.5
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 1.7e-06 57.0 175 29.1
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 8.5e-06 54.7 187 29.9


User provided reference genes

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