Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 1.9e-156 555.8 282 100.0
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 1.6e-131 473.0 288 86.1
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 5.1e-130 468.0 288 85.1
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 2.7e-123 445.7 288 79.9
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 6.7e-122 441.0 287 79.8
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 1.5e-121 439.9 288 78.5
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 2.2e-120 436.0 288 77.4
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 3.8e-117 425.2 288 77.8
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 2.2e-109 399.4 279 77.8
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 7.9e-107 391.0 287 70.7
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 3.1e-103 379.0 261 75.5
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 6.5e-101 371.3 281 68.7
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 1.0e-98 364.0 279 68.8
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 4.0e-98 362.1 286 65.7
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 4.0e-98 362.1 286 65.7
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 1.5e-97 360.1 280 67.1
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 1.5e-97 360.1 285 65.6
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 2.0e-97 359.8 281 68.0
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 2.6e-97 359.4 284 65.8
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 3.3e-97 359.0 284 67.3
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 9.7e-97 357.5 281 67.3
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 2.4e-95 352.8 282 67.4
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 3.1e-95 352.4 285 65.3
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 7.0e-95 351.3 286 64.3
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 1.3e-93 347.1 283 64.0
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 2.2e-93 346.3 238 74.4
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 2.5e-92 342.8 282 65.6
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 3.2e-92 342.4 280 66.4
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 4.2e-92 342.0 280 65.7
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 8.0e-91 337.8 279 64.5
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 5.7e-89 331.6 282 63.5
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 1.3e-88 330.5 283 62.2
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 1.3e-88 330.5 283 62.2
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 6.3e-88 328.2 234 72.6
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 2.4e-87 326.2 281 63.3
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 7.0e-87 324.7 286 61.9
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 9.1e-87 324.3 275 62.5
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 1.2e-86 323.9 284 60.2
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 1.6e-86 323.6 273 62.3
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 5.9e-86 321.6 276 63.0
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 1.3e-85 320.5 276 61.2
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 2.2e-85 319.7 282 60.6
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 8.5e-85 317.8 275 61.8
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 1.9e-84 316.6 289 60.2
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 3.2e-84 315.8 275 60.0
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 2.7e-83 312.8 276 60.9
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 3.0e-82 309.3 286 59.4
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 4.0e-82 308.9 280 60.4
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 9.8e-81 304.3 280 60.0
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 1.3e-80 303.9 282 58.2
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 3.7e-80 302.4 281 61.2
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 1.8e-79 300.1 276 59.4
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 2.0e-78 296.6 281 56.6
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 5.9e-78 295.0 281 57.7
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 7.7e-78 294.7 284 57.4
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 1.3e-77 293.9 289 56.7
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 1.7e-77 293.5 295 56.3
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 1.1e-76 290.8 273 57.9
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 1.9e-76 290.0 281 59.1
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 2.5e-76 289.7 262 61.1
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 3.3e-76 289.3 287 57.5
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 5.6e-76 288.5 290 54.8
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 1.2e-75 287.3 281 55.2
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 1.6e-75 287.0 281 58.4
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 1.6e-75 287.0 280 57.9
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.6e-75 287.0 280 57.9
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 8.0e-75 284.6 289 54.7
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 4.0e-74 282.3 283 55.1
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 2.0e-73 280.0 280 57.1
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 5.9e-70 268.5 303 54.5
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 1.9e-68 263.5 279 52.3
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 4.3e-68 262.3 246 60.6
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 1.4e-66 257.3 239 61.1
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 2.6e-65 253.1 251 57.8
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 3.4e-65 252.7 236 60.2
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.9e-64 248.8 280 53.2
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 4.1e-63 245.7 290 48.6
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 1.2e-62 244.2 289 46.4
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 5.0e-61 238.8 262 54.2
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 6.6e-61 238.4 277 48.7
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 1.5e-60 237.3 274 51.5
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 1.2e-59 234.2 299 44.8
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 4.0e-58 229.2 237 54.9
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 3.7e-56 222.6 280 50.4
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 2.4e-55 219.9 234 53.0
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.6e-54 215.7 280 49.3
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 2.0e-49 200.3 197 56.3
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 2.6e-49 199.9 196 56.6
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 3.4e-49 199.5 197 56.3
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 5.8e-49 198.7 294 45.9
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 1.9e-47 193.7 205 52.7
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 2.4e-47 193.4 178 59.6
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 4.1e-47 192.6 164 62.8
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 4.1e-47 192.6 164 62.8
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 5.4e-47 192.2 204 52.5
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 4.6e-46 189.1 164 62.2
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 4.6e-46 189.1 197 52.8
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 1.7e-45 187.2 198 54.5
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 3.0e-45 186.4 236 47.0
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 5.1e-45 185.7 264 46.2
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 1.5e-44 184.1 290 39.0
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 8.9e-42 174.9 171 52.0
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 2.0e-41 173.7 289 38.4
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 6.4e-40 168.7 101 80.2
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 2.7e-38 163.3 140 57.9
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 1.3e-37 161.0 141 53.9
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 1.7e-37 160.6 131 65.6
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 6.6e-37 158.7 164 56.1
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 1.1e-36 157.9 226 46.0
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 2.5e-36 156.8 95 78.9
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 6.4e-32 142.1 199 46.2
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 5.4e-31 139.0 208 46.2
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 5.1e-29 132.5 193 42.5
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 1.3e-27 127.9 65 86.2
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 2.5e-20 103.6 84 64.3
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 5.6e-20 102.4 209 40.7
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 2.2e-16 90.5 97 55.7
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 1.1e-15 88.2 52 78.8
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 1.2e-14 84.7 172 38.4
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 6.3e-11 72.4 92 46.7
Thecc.06G161000 Theobroma cacao HOM05D000088 ORTHO05D003056 5.0e-08 62.8 116 33.6
TWI73G0176 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 6.5e-08 62.4 116 33.6
TWI09G1601 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 1.1e-07 61.6 116 31.9
Cpa.g.sc50.67 Carica papaya HOM05D000088 ORTHO05D003056 4.2e-07 59.7 80 37.5
Potri.004G064400 Populus trichocarpa HOM05D000088 ORTHO05D003056 7.2e-07 58.9 122 32.0
Sp7g17660 Schrenkiella parvula HOM05D000088 ORTHO05D003056 2.1e-06 57.4 70 41.4
Medtr0259s0040 Medicago truncatula HOM05D006517 ORTHO05D258276 2.7e-06 57.0 58 55.2
HPP92_005187 Vanilla planifolia HOM05D000088 ORTHO05D003056 3.5e-06 56.6 87 35.6
BcaNung04872 Brassica carinata HOM05D000088 ORTHO05D003056 4.6e-06 56.2 90 36.7
Dinv12721 Davidia involucrata HOM05D000088 ORTHO05D003056 4.6e-06 56.2 96 33.3
PSO675G5861 Papaver somniferum HOM05D000088 ORTHO05D003056 4.6e-06 56.2 80 33.8
Lj6g0019783 Lotus japonicus HOM05D000088 ORTHO05D003056 6.1e-06 55.8 91 34.1
Psat2g015120 Pisum sativum HOM05D000088 ORTHO05D003056 6.1e-06 55.8 80 36.2


User provided reference genes

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