Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G122800 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 3.9e-226 787.7 380 100.0
Phvul.007G113900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 9.2e-183 643.7 404 80.2
Phvul.004G078300 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 1.1e-135 487.3 403 65.5
Phvul.001G132400 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 1.1e-130 470.7 353 68.6
Phvul.004G109100 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 4.5e-129 465.3 281 83.3
Phvul.005G066300 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 9.1e-98 361.3 266 71.4
Phvul.003G077500 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 1.5e-87 327.4 184 84.8
Phvul.007G133900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 1.2e-54 218.0 265 42.6
Phvul.003G065500 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 1.2e-52 211.5 390 36.2
Phvul.002G118700 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 6.6e-40 169.1 276 39.5
Phvul.001G121300 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 1.5e-36 157.9 175 43.4
Phvul.005G064000 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 2.2e-35 154.1 278 35.3
Phvul.007G142300 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 1.3e-32 144.8 306 33.3
Phvul.008G175400 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 2.2e-27 127.5 306 31.4
Phvul.009G112900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 1.4e-26 124.8 140 41.4
Phvul.003G065900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 2.4e-26 124.0 143 42.0
VMungo0647G0850 Vigna mungo HOM05D000410 ORTHO05D007231 1.2e-25 121.7 261 34.1
Medtr6g033460 Medicago truncatula HOM05D008332 ORTHO05D010135 1.3e-24 118.2 375 27.5
Phvul.001G023000 Phaseolus vulgaris HOM05D009155 ORTHO05D004853 3.0e-24 117.1 290 31.7
VMungo0496G0001 Vigna mungo HOM05D009855 ORTHO05D010135 3.6e-22 110.2 275 30.5
VMungo0647G1041 Vigna mungo HOM05D009155 ORTHO05D004853 8.1e-22 109.0 335 26.9
VMungo1383G1533 Vigna mungo HOM05D009155 ORTHO05D004853 6.9e-21 105.9 351 25.6
TPR.G30395 Trifolium pratense HOM05D008332 ORTHO05D010135 1.2e-20 105.1 267 30.0
TPR.G18935 Trifolium pratense HOM05D008332 ORTHO05D010135 2.6e-20 104.0 374 25.9
VMungo0647G1863 Vigna mungo HOM05D009155 ORTHO05D004853 2.6e-20 104.0 356 26.1
VMungo0647G0491 Vigna mungo HOM05D009155 ORTHO05D004853 1.3e-19 101.7 319 26.3
VMungo1309G2955 Vigna mungo HOM05D009855 ORTHO05D010135 6.4e-19 99.4 336 25.3
Medtr2g083020 Medicago truncatula HOM05D008332 ORTHO05D010135 1.4e-18 98.2 407 25.6
VMungo0251G1225 Vigna mungo HOM05D000014 ORTHO05D000016 1.4e-18 98.2 365 25.8
Lalb_Chr09g0324261 Lupinus albus HOM05D009855 ORTHO05D010135 1.9e-18 97.8 140 44.3
Medtr2g009940 Medicago truncatula HOM05D008332 ORTHO05D010135 2.4e-18 97.4 430 25.6
Phvul.003G138486 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 5.4e-18 96.3 101 46.5
Medtr6g014585 Medicago truncatula HOM05D008332 ORTHO05D010135 7.1e-18 95.9 407 25.1
Medtr7g024810 Medicago truncatula HOM05D008332 ORTHO05D010135 7.1e-18 95.9 407 25.3
Medtr6g012930 Medicago truncatula HOM05D008332 ORTHO05D010135 1.2e-17 95.1 407 25.3
TPR.G22724 Trifolium pratense HOM05D008332 ORTHO05D010135 6.0e-17 92.8 232 33.2
VMungo1215G1710 Vigna mungo HOM05D009155 ORTHO05D004853 1.8e-16 91.3 270 27.4
arahy.Tifrunner.gnm1.ann1.P0BLZN Arachis hypogaea HOM05D005718 ORTHO05D004853 2.5e-15 87.4 260 27.7
TPR.G38548 Trifolium pratense HOM05D008332 ORTHO05D010135 4.3e-15 86.7 230 31.3
TPR.G18967 Trifolium pratense HOM05D008332 ORTHO05D010135 5.6e-15 86.3 224 30.4
TPR.G39718 Trifolium pratense HOM05D008332 ORTHO05D010135 5.6e-15 86.3 190 31.6
Medtr3g030280 Medicago truncatula HOM05D008332 ORTHO05D010135 4.8e-14 83.2 288 27.1
Glyma.09G117500 Glycine max HOM05D005718 ORTHO05D004853 1.4e-13 81.6 275 26.5
VMungo0251G0612 Vigna mungo HOM05D009155 ORTHO05D004853 1.8e-13 81.3 273 29.7
Medtr5g454250 Medicago truncatula HOM05D008332 ORTHO05D010135 2.4e-13 80.9 263 28.9
TPR.G62 Trifolium pratense HOM05D008332 ORTHO05D010135 3.4e-12 77.0 163 31.9
VMungo0647G1872 Vigna mungo HOM05D009155 ORTHO05D004853 5.8e-12 76.3 262 26.3
Medtr7g029850 Medicago truncatula HOM05D008332 ORTHO05D010135 7.6e-12 75.9 399 23.1
TPR.G29188 Trifolium pratense HOM05D008332 ORTHO05D010135 1.3e-11 75.1 255 27.1
TPR.G8862 Trifolium pratense HOM05D008332 ORTHO05D010135 1.4e-10 71.6 118 33.9
TPR.G14040 Trifolium pratense HOM05D008332 ORTHO05D010135 4.2e-10 70.1 168 31.0
Medtr0019s0170 Medicago truncatula HOM05D008332 ORTHO05D010135 7.1e-10 69.3 148 32.4
TPR.G14209 Trifolium pratense HOM05D012339 ORTHO05D004853 7.1e-10 69.3 303 25.7
TPR.G18060 Trifolium pratense HOM05D001219 ORTHO05D001017 1.2e-09 68.6 253 24.9
VMungo0720G1205 Vigna mungo HOM05D009855 ORTHO05D010135 1.6e-09 68.2 76 38.2
VMungo0540G1633 Vigna mungo HOM05D000014 ORTHO05D000093 2.7e-09 67.4 280 25.4
TPR.G39889 Trifolium pratense HOM05D008332 ORTHO05D010135 7.9e-09 65.9 139 31.7
Lalb_Chr11g0071031 Lupinus albus HOM05D009855 ORTHO05D001203 2.3e-08 64.3 104 41.3
Oeu049634.1 Olea europaea HOM05D007234 ORTHO05D008488 2.3e-08 64.3 274 25.5
Oeu040314.1 Olea europaea HOM05D007234 ORTHO05D008488 8.7e-08 62.4 202 27.2
Oeu045905.1 Olea europaea HOM05D007234 ORTHO05D008488 2.5e-07 60.8 265 24.5
Medtr6g023550 Medicago truncatula HOM05D005718 ORTHO05D004853 3.3e-07 60.5 148 29.7
arahy.Tifrunner.gnm1.ann1.VX3S13 Arachis hypogaea HOM05D005718 ORTHO05D004853 4.3e-07 60.1 181 28.7
Oeu049373.1 Olea europaea HOM05D007234 ORTHO05D008488 7.4e-07 59.3 211 27.0
TPR.G20348 Trifolium pratense HOM05D008332 ORTHO05D010135 1.3e-06 58.5 145 30.3


User provided reference genes

Program Settings