Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G115000 Phaseolus vulgaris HOM05D001445 ORTHO05D001261 1.3e-82 309.7 153 100.0
Phvul.003G227600 Phaseolus vulgaris HOM05D001445 ORTHO05D001261 4.1e-73 278.1 153 89.5
Phvul.003G227500 Phaseolus vulgaris HOM05D001445 ORTHO05D001261 3.7e-34 148.7 152 52.6
Glyma.17G151200 Glycine max HOM05D001445 ORTHO05D001261 6.4e-34 147.9 150 54.0
VMungo0251G1280 Vigna mungo HOM05D001445 ORTHO05D001261 6.4e-34 147.9 150 55.3
Phvul.006G071800 Phaseolus vulgaris HOM05D001445 ORTHO05D001261 3.0e-31 139.0 150 52.0
Glyma.05G068700 Glycine max HOM05D001445 ORTHO05D001261 3.9e-31 138.7 151 51.7
Lj4g0026234 Lotus japonicus HOM05D001445 ORTHO05D001261 5.2e-28 128.3 149 50.3
Ca_22037_v3 Cicer arietinum L. HOM05D001445 ORTHO05D001261 4.1e-25 118.6 153 45.8
TPR.G19189 Trifolium pratense HOM05D001445 ORTHO05D001261 5.4e-25 118.2 152 47.4
Lalb_Chr16g0386171 Lupinus albus HOM05D001445 ORTHO05D001261 4.6e-24 115.2 142 45.1
Medtr4g099010 Medicago truncatula HOM05D001445 ORTHO05D001261 6.6e-23 111.3 152 44.7
Psat4g079960 Pisum sativum HOM05D001445 ORTHO05D001261 9.5e-22 107.5 153 45.1
Psat4g080000 Pisum sativum HOM05D001445 ORTHO05D001261 1.2e-21 107.1 154 44.2
MD06G1042400 Malus domestica HOM05D001445 ORTHO05D001261 1.6e-21 106.7 153 40.5
Prupe.5G048900 Prunus persica HOM05D001445 ORTHO05D001261 2.3e-20 102.8 146 40.4
Thecc.03G235500 Theobroma cacao HOM05D001445 ORTHO05D001261 5.8e-19 98.2 148 39.2
Duzib205G0415 Durio zibethinus HOM05D001445 ORTHO05D001261 2.2e-18 96.3 148 36.5
RcHm_v2.0_Chr7g0207991 Rosa chinensis HOM05D001445 ORTHO05D001261 2.4e-17 92.8 148 37.2
Eucgr.E00321 Eucalyptus grandis HOM05D001445 ORTHO05D001261 1.2e-16 90.5 145 36.6
Manes.15G171900 Manihot esculenta HOM05D001445 ORTHO05D001261 1.6e-16 90.1 146 37.0
TAR375G1152 Trochodendron aralioides HOM05D001445 ORTHO05D001261 1.6e-16 90.1 147 34.7
COL.COLO4_17127 Corchorus olitorius HOM05D001445 ORTHO05D001261 3.5e-16 89.0 148 37.8
Gohir.D12G119500 Gossypium hirsutum HOM05D001445 ORTHO05D001261 7.8e-16 87.8 147 39.5
FAN08G1111 Fragaria x ananassa HOM05D001445 ORTHO05D001261 1.3e-15 87.0 146 34.9
Ciclev10033644m.g Citrus clementina HOM05D001445 ORTHO05D001261 1.7e-15 86.7 144 35.4
Gohir.D03G169433 Gossypium hirsutum HOM05D001445 ORTHO05D001261 3.0e-15 85.9 147 34.0
Gorai.003G179700 Gossypium raimondii HOM05D001445 ORTHO05D001261 3.0e-15 85.9 147 34.0
Gorai.008G130000 Gossypium raimondii HOM05D001445 ORTHO05D001261 3.0e-15 85.9 147 38.8
Nn1g02148 Nelumbo nucifera HOM05D001445 ORTHO05D001261 3.9e-15 85.5 137 33.6
FvH4_5g20940 Fragaria vesca HOM05D001445 ORTHO05D001261 5.1e-15 85.1 146 34.9
FAN18G4149 Fragaria x ananassa HOM05D001445 ORTHO05D001261 5.1e-15 85.1 146 34.9
Nn1g00664 Nelumbo nucifera HOM05D001445 ORTHO05D001261 6.6e-15 84.7 137 33.6
Sed0025882 Sechium edule HOM05D001445 ORTHO05D001261 6.6e-15 84.7 146 32.2
COL.COLO4_17126 Corchorus olitorius HOM05D001445 ORTHO05D001261 1.1e-14 84.0 148 36.5
Potri.014G044100 Populus trichocarpa HOM05D001445 ORTHO05D001261 1.5e-14 83.6 141 34.0
TAR375G0630 Trochodendron aralioides HOM05D001445 ORTHO05D001261 1.5e-14 83.6 144 34.0
TAR629G3049 Trochodendron aralioides HOM05D001445 ORTHO05D001261 1.9e-14 83.2 137 36.5
Gorai.001G141900 Gossypium raimondii HOM05D001445 ORTHO05D001261 3.3e-14 82.4 149 36.2
Gorai.001G141800 Gossypium raimondii HOM05D001445 ORTHO05D001261 4.3e-14 82.0 149 36.2
Lj3g0025567 Lotus japonicus HOM05D001445 ORTHO05D001261 4.3e-14 82.0 145 31.7
TAR073G0001 Trochodendron aralioides HOM05D001445 ORTHO05D001261 7.3e-14 81.3 147 34.0
CiPaw.13G022000 Carya illinoinensis HOM05D001445 ORTHO05D001261 9.5e-14 80.9 142 33.8
Gohir.D07G130850 Gossypium hirsutum HOM05D001445 ORTHO05D001261 9.5e-14 80.9 141 35.5
Gorai.001G141700 Gossypium raimondii HOM05D001445 ORTHO05D001261 9.5e-14 80.9 149 36.2
Medtr8g009300 Medicago truncatula HOM05D001445 ORTHO05D001261 9.5e-14 80.9 145 33.1
TWI15G1112 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 9.5e-14 80.9 157 35.0
Potri.003G086500 Populus trichocarpa HOM05D001445 ORTHO05D001261 1.2e-13 80.5 146 34.2
Duzib084G0977 Durio zibethinus HOM05D001445 ORTHO05D001261 2.1e-13 79.7 149 32.9
Gohir.A07G126700 Gossypium hirsutum HOM05D001445 ORTHO05D001261 2.1e-13 79.7 149 36.2
Cc02_g25640 Coffea canephora HOM05D001445 ORTHO05D001261 4.7e-13 78.6 147 34.0
PSO081G0137 Papaver somniferum HOM05D001445 ORTHO05D001261 4.7e-13 78.6 155 31.6
VMungo0331G1992 Vigna mungo HOM05D001445 ORTHO05D001261 4.7e-13 78.6 147 36.1
FAN13G3027 Fragaria x ananassa HOM05D001445 ORTHO05D001261 6.2e-13 78.2 145 33.1
Phvul.010G041500 Phaseolus vulgaris HOM05D001445 ORTHO05D001261 6.2e-13 78.2 147 36.1
Gohir.D07G130900 Gossypium hirsutum HOM05D001445 ORTHO05D001261 1.1e-12 77.4 149 34.9
EL10Ac8g19001 Beta vulgaris HOM05D001445 ORTHO05D001261 1.4e-12 77.0 145 33.1
EL10Ac8g19002 Beta vulgaris HOM05D001445 ORTHO05D001261 1.4e-12 77.0 149 33.6
MELO3C022458.2 Cucumis melo HOM05D001445 ORTHO05D001261 1.8e-12 76.6 140 30.7
Ciclev10023652m.g Citrus clementina HOM05D001445 ORTHO05D001261 2.3e-12 76.3 142 33.1
CsaV3_6G006700 Cucumis sativus L. HOM05D001445 ORTHO05D001261 2.3e-12 76.3 144 31.2
Gorai.001G141600 Gossypium raimondii HOM05D001445 ORTHO05D001261 2.3e-12 76.3 149 36.2
PSO541G5973 Papaver somniferum HOM05D001445 ORTHO05D001261 2.3e-12 76.3 142 30.3
Sp2g11740 Schrenkiella parvula HOM05D001445 ORTHO05D001261 2.3e-12 76.3 141 31.2
COL.COLO4_17125 Corchorus olitorius HOM05D001445 ORTHO05D001261 3.1e-12 75.9 146 34.2
PSO782G5274 Papaver somniferum HOM05D001445 ORTHO05D001261 3.1e-12 75.9 147 32.0
Ah.01g010410 Amaranthus hybridus HOM05D001445 ORTHO05D001261 5.2e-12 75.1 142 33.1
Gohir.D07G130800 Gossypium hirsutum HOM05D001445 ORTHO05D001261 5.2e-12 75.1 149 36.2
Glyma.03G103400 Glycine max HOM05D001445 ORTHO05D001261 6.8e-12 74.7 146 33.6
Nn1g00663 Nelumbo nucifera HOM05D001445 ORTHO05D001261 8.9e-12 74.3 137 30.7
Migut.B01486 Erythranthe guttata HOM05D001445 ORTHO05D001261 1.5e-11 73.6 146 30.8
CANSAT21G0328 Cannabis sativa HOM05D001445 ORTHO05D001261 2.0e-11 73.2 143 31.5
Hma1.2p1_0414F.1_g147630 Hydrangea macrophylla HOM05D001445 ORTHO05D001261 2.0e-11 73.2 104 38.5
PSO026G0001 Papaver somniferum HOM05D001445 ORTHO05D001261 2.6e-11 72.8 146 30.1
VMungo0464G1160 Vigna mungo HOM05D001445 ORTHO05D001261 2.6e-11 72.8 140 35.7
Gohir.A07G126650 Gossypium hirsutum HOM05D001445 ORTHO05D001261 3.4e-11 72.4 142 34.5
Prupe.2G115600 Prunus persica HOM05D001445 ORTHO05D001261 3.4e-11 72.4 141 30.5
ClCG06G000830 Citrullus lanatus HOM05D001445 ORTHO05D001261 4.4e-11 72.0 140 29.3
Lsat_1_v5_gn_7_11841 Lactuca sativa HOM05D001445 ORTHO05D001261 4.4e-11 72.0 153 30.7
Dinv25174 Davidia involucrata HOM05D001445 ORTHO05D001261 5.8e-11 71.6 144 31.9
HanXRQChr04g0115481 Helianthus annuus HOM05D001445 ORTHO05D001261 5.8e-11 71.6 149 32.2
ECA236G4359 Erigeron canadensis HOM05D001445 ORTHO05D001261 9.9e-11 70.9 147 31.3
MELO3C003367.2 Cucumis melo HOM05D001445 ORTHO05D001261 1.7e-10 70.1 147 29.9
PSO081G0031 Papaver somniferum HOM05D001445 ORTHO05D001261 1.7e-10 70.1 142 33.1
PSO541G5291 Papaver somniferum HOM05D001445 ORTHO05D001261 1.7e-10 70.1 142 27.5
PSO782G4884 Papaver somniferum HOM05D001445 ORTHO05D001261 2.2e-10 69.7 150 30.7
Ah.09g229110 Amaranthus hybridus HOM05D001445 ORTHO05D001261 2.9e-10 69.3 143 31.5
A02p30590 Brassica napus HOM05D001445 ORTHO05D001261 2.9e-10 69.3 148 31.8
A02p30560 Brassica napus HOM05D001445 ORTHO05D001261 3.8e-10 68.9 144 33.3
RcHm_v2.0_Chr1g0344051 Rosa chinensis HOM05D001445 ORTHO05D001261 3.8e-10 68.9 148 30.4
Aqoxy2G03061 Aquilegia oxysepala HOM05D001445 ORTHO05D001261 4.9e-10 68.6 154 31.8
Aqoxy3G02557 Aquilegia oxysepala HOM05D001445 ORTHO05D001261 4.9e-10 68.6 148 30.4
PSO478G4988 Papaver somniferum HOM05D001445 ORTHO05D001261 4.9e-10 68.6 148 31.1
BolC3t18500H Brassica oleracea HOM05D001445 ORTHO05D001261 6.4e-10 68.2 148 31.8
RcHm_v2.0_Chr7g0207981 Rosa chinensis HOM05D001445 ORTHO05D001261 6.4e-10 68.2 147 32.0
PSO081G0055 Papaver somniferum HOM05D001445 ORTHO05D001261 8.4e-10 67.8 142 32.4
RcHm_v2.0_Chr1g0344001 Rosa chinensis HOM05D001445 ORTHO05D001261 8.4e-10 67.8 146 31.5
Oeu018160.1 Olea europaea HOM05D001445 ORTHO05D001261 1.1e-09 67.4 146 28.1
Manes.05G058600 Manihot esculenta HOM05D001445 ORTHO05D001261 1.4e-09 67.0 142 29.6
CSS0020469 Camellia sinensis var. sinensis HOM05D001445 ORTHO05D001261 1.9e-09 66.6 143 29.4
CsaV3_6G006710 Cucumis sativus L. HOM05D005488 ORTHO05D001261 1.9e-09 66.6 145 31.0
DCAR_025024 Daucus carota HOM05D001445 ORTHO05D001261 1.9e-09 66.6 148 30.4
PSO081G0157 Papaver somniferum HOM05D001445 ORTHO05D001261 1.9e-09 66.6 142 31.7
PSO081G0174 Papaver somniferum HOM05D001445 ORTHO05D001261 1.9e-09 66.6 142 31.7
Carub.0008s0090 Capsella rubella HOM05D001445 ORTHO05D001261 3.2e-09 65.9 147 29.3
MELO3C022456.2 Cucumis melo HOM05D001445 ORTHO05D001261 3.2e-09 65.9 146 28.1
BcaC03g16913 Brassica carinata HOM05D001445 ORTHO05D001261 4.1e-09 65.5 148 31.1
C02p48150 Brassica napus HOM05D001445 ORTHO05D001261 4.1e-09 65.5 148 31.1
C03p62420 Brassica napus HOM05D001445 ORTHO05D001261 4.1e-09 65.5 144 31.2
BolC2t10847H Brassica oleracea HOM05D001445 ORTHO05D001261 4.1e-09 65.5 148 31.1
CsaV3_3G049590 Cucumis sativus L. HOM05D001445 ORTHO05D001261 4.1e-09 65.5 135 31.9
ECA234G4250 Erigeron canadensis HOM05D001445 ORTHO05D001261 4.1e-09 65.5 148 31.8
PSO478G2336 Papaver somniferum HOM05D001445 ORTHO05D001261 4.1e-09 65.5 149 28.9
SGA_v2.0_scaffold52G19268 Striga asiatica HOM05D001445 ORTHO05D001261 4.1e-09 65.5 148 31.1
Hma1.2p1_0311F.1_g121170 Hydrangea macrophylla HOM05D001445 ORTHO05D001261 9.2e-09 64.3 121 30.6
BcaB07g30808 Brassica carinata HOM05D001445 ORTHO05D001261 1.6e-08 63.5 148 31.1
Nn1g00653 Nelumbo nucifera HOM05D001445 ORTHO05D001261 1.6e-08 63.5 131 32.8
AT5G46950 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 2.1e-08 63.2 142 31.0
Thhalv10001100m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 2.1e-08 63.2 149 25.5
FvH4_5g20930 Fragaria vesca HOM05D001445 ORTHO05D001261 2.1e-08 63.2 147 30.6
FAN18G2178 Fragaria x ananassa HOM05D001445 ORTHO05D001261 2.1e-08 63.2 147 30.6
Sp2g11720 Schrenkiella parvula HOM05D001445 ORTHO05D001261 3.5e-08 62.4 150 28.7
Actinidia30953 Actinidia chinensis HOM05D001445 ORTHO05D001261 4.6e-08 62.0 138 28.3
BraA02t08078Z Brassica rapa HOM05D001445 ORTHO05D001261 4.6e-08 62.0 148 32.4
HanXRQChr07g0188521 Helianthus annuus HOM05D001445 ORTHO05D001261 4.6e-08 62.0 145 28.3
CARHR174500 Cardamine hirsuta HOM05D001445 ORTHO05D001261 1.0e-07 60.8 148 27.7
RcHm_v2.0_Chr1g0344031 Rosa chinensis HOM05D001445 ORTHO05D001261 1.0e-07 60.8 138 29.7
AL8G11340 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 1.3e-07 60.5 149 28.2
Sp2g11730 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.3e-07 60.5 147 27.9
AT5G46930 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 1.7e-07 60.1 149 28.9
PSO573G0024 Papaver somniferum HOM05D001445 ORTHO05D001261 1.7e-07 60.1 115 31.3
FAN08G3072 Fragaria x ananassa HOM05D001445 ORTHO05D001261 3.0e-07 59.3 147 29.3
Thhalv10001199m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 5.1e-07 58.5 147 27.9
Sc07g0008930 Simmondsia chinensis HOM05D001445 ORTHO05D001261 5.1e-07 58.5 146 32.2
Lsat_1_v5_gn_4_38540 Lactuca sativa HOM05D001445 ORTHO05D001261 6.6e-07 58.2 147 29.9
PSO675G9385 Papaver somniferum HOM05D003208 ORTHO05D004103 1.9e-06 56.6 117 32.5
PSO782G0985 Papaver somniferum HOM05D001445 ORTHO05D001261 1.9e-06 56.6 140 26.4
TAR362G0027 Trochodendron aralioides HOM05D008339 ORTHO05D009712 1.9e-06 56.6 137 29.2
Ca_22038_v3 Cicer arietinum L. HOM05D001445 ORTHO05D001261 3.3e-06 55.8 137 29.2
AL8G11320 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 4.3e-06 55.5 142 27.5
AT5G46960 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 4.3e-06 55.5 121 29.8
PSO675G1997 Papaver somniferum HOM05D001445 ORTHO05D001261 5.6e-06 55.1 116 31.9


User provided reference genes

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