Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 4.4e-93 344.7 188 100.0
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 4.7e-79 298.1 189 87.3
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 1.6e-74 283.1 190 86.3
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 1.6e-71 273.1 188 83.0
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 5.0e-57 224.9 189 73.0
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 1.2e-45 187.2 189 64.6
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 1.3e-41 173.7 187 63.1
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 6.6e-41 171.4 187 62.0
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 6.6e-33 144.8 185 57.3
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 7.3e-32 141.4 208 47.6
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 1.2e-31 140.6 208 46.6
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 1.1e-30 137.5 196 53.1
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 1.8e-30 136.7 208 46.6
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 1.5e-29 133.7 211 46.0
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 3.4e-29 132.5 193 52.3
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 4.4e-29 132.1 202 48.0
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 1.7e-28 130.2 211 43.6
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 1.4e-27 127.1 196 51.0
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 2.4e-27 126.3 188 51.6
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 7.1e-27 124.8 201 49.8
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 6.0e-26 121.7 201 44.8
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 1.7e-25 120.2 188 44.7
TPR.G22774 Trifolium pratense HOM05D007152 ORTHO05D008912 2.3e-25 119.8 123 64.2
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 3.9e-25 119.0 189 45.5
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 8.6e-25 117.9 201 45.3
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 2.5e-24 116.3 209 46.4
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 3.3e-24 115.9 180 47.2
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 3.3e-24 115.9 201 45.8
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 7.3e-24 114.8 196 46.4
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 2.8e-23 112.8 194 45.9
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 3.6e-23 112.5 192 47.4
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 3.6e-23 112.5 205 46.3
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 8.1e-23 111.3 186 46.2
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 1.4e-22 110.5 207 41.1
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 1.8e-22 110.2 200 46.5
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 2.4e-22 109.8 201 46.8
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 4.0e-22 109.0 212 47.2
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 1.5e-21 107.1 201 39.8
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 3.4e-21 105.9 201 42.3
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 7.6e-21 104.8 205 43.9
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 3.8e-20 102.4 203 44.3
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 6.4e-20 101.7 188 41.0
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 1.1e-19 100.9 195 46.2
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 1.1e-19 100.9 210 43.8
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 1.4e-19 100.5 203 34.5
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 1.4e-19 100.5 198 37.9
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 1.9e-19 100.1 198 44.4
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 2.4e-19 99.8 187 46.5
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 3.2e-19 99.4 195 45.6
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 7.1e-19 98.2 202 43.1
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 7.1e-19 98.2 202 43.1
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.6e-18 97.1 195 44.6
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.6e-18 97.1 202 42.6
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 2.1e-18 96.7 163 41.7
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 2.1e-18 96.7 203 43.8
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 3.5e-18 95.9 168 47.0
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 4.6e-18 95.5 193 40.9
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 6.0e-18 95.1 207 44.0
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 7.8e-18 94.7 185 45.9
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 7.8e-18 94.7 148 50.7
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 1.7e-17 93.6 197 38.1
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 1.7e-17 93.6 210 43.8
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 5.1e-17 92.0 193 36.3
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 6.6e-17 91.7 195 43.1
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 1.1e-16 90.9 135 51.9
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 3.3e-16 89.4 164 45.7
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 4.3e-16 89.0 184 39.1
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 4.3e-16 89.0 200 42.5
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 1.3e-15 87.4 201 41.3
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 2.1e-15 86.7 210 38.6
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 2.1e-15 86.7 210 38.6
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 2.8e-15 86.3 212 41.0
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 8.1e-15 84.7 195 38.5
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 2.4e-14 83.2 193 35.2
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 3.1e-14 82.8 187 41.2
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 3.1e-14 82.8 130 50.0
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 4.0e-14 82.4 203 38.9
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 6.9e-14 81.6 105 46.7
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 9.0e-14 81.3 204 32.8
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 2.0e-13 80.1 136 43.4
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 2.0e-13 80.1 157 43.9
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 2.6e-13 79.7 79 57.0
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 3.4e-13 79.3 186 40.3
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 3.4e-13 79.3 196 43.4
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 5.8e-13 78.6 171 39.8
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 7.6e-13 78.2 203 39.9
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 1.7e-12 77.0 193 34.2
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 1.7e-12 77.0 198 38.4
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 4.9e-12 75.5 157 44.6
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 6.4e-12 75.1 201 40.8
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 8.4e-12 74.7 124 45.2
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 8.4e-12 74.7 194 37.1
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 1.1e-11 74.3 204 36.8
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 1.1e-11 74.3 188 38.3
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 2.4e-11 73.2 203 36.9
Eucgr.G02139 Eucalyptus grandis HOM05D007152 ORTHO05D008912 9.3e-11 71.2 111 46.8
Eucgr.G02132 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.3e-09 67.4 134 46.3
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 2.3e-09 66.6 188 33.5
Ah.04g153700 Amaranthus hybridus HOM05D007152 ORTHO05D008912 3.0e-09 66.2 164 36.6
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 1.9e-08 63.5 171 41.5
Sabra08G0151100 Salix brachista HOM05D007152 ORTHO05D008912 3.3e-08 62.8 64 54.7
ATR0693G346 Amborella trichopoda HOM05D007152 ORTHO05D008912 8.1e-07 58.2 139 39.6
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 1.4e-06 57.4 43 55.8
CDE02G4694 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 4.0e-06 55.8 148 41.9


User provided reference genes

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