Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 5.2e-111 404.4 211 100.0
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 1.3e-85 320.1 200 87.0
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 1.7e-69 266.5 213 74.2
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 1.6e-67 260.0 203 72.4
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 2.6e-46 189.5 187 62.0
Ca_21546_v3 Cicer arietinum L. HOM05D008610 ORTHO05D010832 4.5e-46 188.7 174 64.4
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 1.6e-43 180.3 176 59.7
Medtr4g118830 Medicago truncatula HOM05D008610 ORTHO05D010832 6.7e-42 174.9 181 58.0
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 6.3e-40 168.3 196 56.1
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 1.0e-34 151.0 172 53.5
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 2.5e-33 146.4 174 52.3
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 5.7e-33 145.2 219 43.4
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 6.9e-31 138.3 198 45.5
Lalb_Chr12g0196451 Lupinus albus HOM05D008610 ORTHO05D010832 3.4e-30 136.0 145 55.2
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 8.5e-29 131.3 208 41.3
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 1.6e-27 127.1 198 41.9
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 1.4e-26 124.0 194 42.8
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 3.9e-26 122.5 229 40.6
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 3.7e-24 115.9 204 42.2
Sed0011065 Sechium edule HOM05D008610 ORTHO05D010832 8.2e-24 114.8 198 39.9
Dinv44421 Davidia involucrata HOM05D008610 ORTHO05D010832 1.8e-23 113.6 146 47.9
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 1.5e-22 110.5 154 45.5
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 1.3e-21 107.5 221 38.0
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 3.8e-21 105.9 207 40.6
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 5.0e-21 105.5 196 37.2
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 1.1e-20 104.4 200 37.5
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 1.5e-20 104.0 196 41.3
Nitab4.5_0000829g0060 Nicotiana tabacum HOM05D008610 ORTHO05D010832 3.2e-20 102.8 224 35.3
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 2.1e-19 100.1 210 39.0
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 2.1e-19 100.1 196 37.8
Nitab4.5_0002986g0040 Nicotiana tabacum HOM05D008610 ORTHO05D010832 6.1e-19 98.6 156 41.7
CsaV3_3G014190 Cucumis sativus L. HOM05D008610 ORTHO05D010832 3.0e-18 96.3 178 36.5
ClCG05G005840 Citrullus lanatus HOM05D008610 ORTHO05D010832 4.0e-18 95.9 203 36.9
DCAR_027105 Daucus carota HOM05D008610 ORTHO05D010832 2.2e-16 90.1 152 41.4
Migut.G00203 Erythranthe guttata HOM05D008610 ORTHO05D010832 3.7e-16 89.4 201 34.3
Aqoxy2G03100 Aquilegia oxysepala HOM05D008610 ORTHO05D010832 7.0e-15 85.1 173 36.4
MELO3C006612.2 Cucumis melo HOM05D008610 ORTHO05D010832 2.0e-14 83.6 159 37.1
unitig_748.g8579 Utricularia gibba HOM05D008610 ORTHO05D010832 5.9e-14 82.0 195 32.3
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 1.3e-13 80.9 165 37.0
ATR0706G219 Amborella trichopoda HOM05D008610 ORTHO05D010832 2.5e-12 76.6 160 33.8
Nn3g21308 Nelumbo nucifera HOM05D008610 ORTHO05D010832 2.7e-11 73.2 126 44.4
PSO170G6844 Papaver somniferum HOM05D008610 ORTHO05D010832 4.0e-10 69.3 155 33.5
Medtr4g118430 Medicago truncatula HOM05D008610 ORTHO05D010832 6.8e-10 68.6 106 39.6
Atru.chr4.2765 Acer truncatum HOM05D008610 ORTHO05D010832 2.0e-09 67.0 97 42.3
SGA_v2.0_scaffold57G20206 Striga asiatica HOM05D008610 ORTHO05D010832 2.0e-09 67.0 185 33.0
VMungo0251G1556 Vigna mungo HOM05D003014 ORTHO05D003233 4.4e-09 65.9 159 30.2
Phvul.003G048100 Phaseolus vulgaris HOM05D003014 ORTHO05D003233 4.8e-08 62.4 155 30.3
Phvul.003G048000 Phaseolus vulgaris HOM05D003014 ORTHO05D003233 5.4e-07 58.9 168 29.2
QL02p004396 Quercus lobata HOM05D003014 ORTHO05D003233 7.0e-07 58.5 132 27.3
unitig_0.g90 Utricularia gibba HOM05D003014 ORTHO05D003233 9.1e-07 58.2 142 27.5
ECA240G1347 Erigeron canadensis HOM05D003014 ORTHO05D003233 4.5e-06 55.8 175 29.7
Lalb_Chr20g0108401 Lupinus albus HOM05D003014 ORTHO05D003233 4.5e-06 55.8 179 29.6


User provided reference genes

Program Settings