Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 2.4e-147 525.4 253 100.0
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 1.5e-141 506.1 253 95.3
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 1.9e-128 462.6 248 88.7
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 3.9e-113 411.8 257 77.4
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 8.4e-108 394.0 250 75.6
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 4.2e-107 391.7 256 73.8
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 5.8e-101 371.3 249 71.5
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 5.5e-99 364.8 237 73.8
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 6.3e-95 351.3 246 67.9
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 5.3e-94 348.2 251 66.1
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 7.2e-91 337.8 245 65.3
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 6.7e-89 331.3 245 63.7
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 3.9e-81 305.4 252 57.9
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 6.7e-81 304.7 237 61.2
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 2.0e-80 303.1 239 62.3
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 1.1e-78 297.4 237 59.9
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 2.4e-78 296.2 233 62.2
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 2.4e-78 296.2 236 58.5
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 1.1e-75 287.3 239 58.2
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 1.8e-73 280.0 234 59.4
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 1.8e-73 280.0 246 54.5
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 2.3e-73 279.6 246 54.9
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 3.3e-72 275.8 227 59.5
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 4.8e-71 271.9 236 57.2
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 6.3e-71 271.6 251 53.0
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 5.3e-70 268.5 239 53.6
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 7.0e-70 268.1 244 52.5
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 9.1e-70 267.7 244 50.0
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 2.0e-69 266.5 264 50.8
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 2.6e-69 266.2 238 52.5
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 1.0e-68 264.2 237 53.2
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.0e-68 264.2 238 53.8
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 1.7e-68 263.5 237 53.6
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 2.2e-68 263.1 241 51.5
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 3.8e-68 262.3 244 52.0
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 5.0e-68 261.9 238 54.6
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 6.5e-68 261.5 236 52.5
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 1.5e-67 260.4 243 53.1
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 3.2e-67 259.2 241 53.1
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 7.2e-67 258.1 235 52.8
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 1.2e-66 257.3 254 48.4
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 1.2e-66 257.3 238 55.0
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 2.7e-66 256.1 237 52.7
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 3.6e-66 255.8 241 51.0
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 3.6e-66 255.8 251 48.6
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 8.0e-66 254.6 251 49.0
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.0e-65 254.2 246 51.2
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 2.3e-65 253.1 242 50.8
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 8.8e-65 251.1 240 52.1
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 2.6e-64 249.6 243 52.3
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 4.4e-64 248.8 227 50.7
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 2.2e-63 246.5 221 55.2
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 6.3e-63 245.0 246 51.2
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 8.2e-63 244.6 250 48.4
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 8.2e-63 244.6 241 51.0
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 5.3e-62 241.9 249 47.8
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 1.2e-61 240.7 249 47.4
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 3.5e-61 239.2 241 49.4
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.7e-60 236.9 230 51.7
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 2.9e-60 236.1 239 48.5
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 6.5e-60 235.0 241 48.5
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 2.5e-59 233.0 242 46.7
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.6e-58 230.3 240 50.4
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 4.7e-58 228.8 248 47.6
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.0e-57 227.6 234 49.1
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 1.8e-57 226.9 232 49.1
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 1.5e-56 223.8 227 48.0
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 2.0e-56 223.4 240 48.8
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 5.7e-56 221.9 239 48.5
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 7.5e-56 221.5 238 47.5
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 7.5e-56 221.5 238 48.3
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 7.5e-56 221.5 251 41.4
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 1.7e-55 220.3 247 46.2
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 1.7e-55 220.3 237 47.7
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 2.2e-55 219.9 238 47.9
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 2.2e-55 219.9 238 47.9
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 4.8e-55 218.8 234 48.3
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 6.3e-55 218.4 237 47.7
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 1.4e-54 217.2 234 47.4
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.4e-54 217.2 245 41.6
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 1.8e-54 216.9 238 47.5
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 1.8e-54 216.9 238 47.5
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 7.0e-54 214.9 224 48.7
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 2.0e-53 213.4 238 45.8
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 2.0e-53 213.4 238 45.8
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 5.9e-53 211.8 236 44.9
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 4.0e-49 199.1 192 50.0
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 5.7e-48 195.3 181 49.7
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 1.3e-47 194.1 230 39.1
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 1.1e-46 191.0 228 46.1
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 3.1e-46 189.5 166 56.0
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 5.4e-46 188.7 155 56.8
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 5.4e-46 188.7 262 39.3
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.2e-45 187.6 234 44.0
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 2.7e-45 186.4 186 47.8
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 4.5e-45 185.7 234 40.6
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 1.5e-43 180.6 265 38.5
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 2.3e-41 173.3 296 35.1
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 4.0e-41 172.6 301 34.2
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 3.7e-39 166.0 233 36.9
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 3.7e-39 166.0 158 51.9
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 5.0e-36 155.6 247 36.4
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.1e-35 154.5 162 43.2
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 1.4e-30 137.5 151 47.0
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 5.4e-30 135.6 147 45.6
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 2.0e-29 133.7 156 44.9
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 1.1e-27 127.9 156 42.9
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 5.2e-25 119.0 364 24.7
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 4.1e-22 109.4 102 51.0
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 7.1e-22 108.6 86 57.0
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 9.2e-22 108.2 81 61.7
Zm00001eb351020 Zea mays HOM05D006775 ORTHO05D008344 4.3e-19 99.4 148 35.8
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 5.6e-19 99.0 147 40.8
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 4.7e-18 95.9 108 48.1
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 3.1e-17 93.2 85 48.2
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 5.2e-17 92.4 66 65.2
CSS0028683 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 1.5e-16 90.9 81 48.1
PSO210G2970 Papaver somniferum HOM05D006775 ORTHO05D008344 2.0e-16 90.5 105 41.9
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 2.0e-16 90.5 64 60.9
Actinidia23427 Actinidia chinensis HOM05D006775 ORTHO05D008344 3.5e-13 79.7 71 46.5
MD09G1114900 Malus domestica HOM05D006775 ORTHO05D008344 2.3e-12 77.0 77 44.2


User provided reference genes

Program Settings