Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G097003 Phaseolus vulgaris HOM05D006680 ORTHO05D008206 2.4e-42 175.6 130 100.0
VMungo1215G2846 Vigna mungo HOM05D006680 ORTHO05D008206 3.9e-40 168.3 130 74.6
Medtr4g120020 Medicago truncatula HOM05D006680 ORTHO05D008206 4.0e-37 158.3 96 86.5
Psat4g026840 Pisum sativum HOM05D006680 ORTHO05D008206 5.2e-37 157.9 130 81.5
Lj4g0016566 Lotus japonicus HOM05D006680 ORTHO05D008206 7.5e-36 154.1 95 84.2
TPR.G3164 Trifolium pratense HOM05D006680 ORTHO05D008206 9.8e-36 153.7 95 82.1
Ca_21488_v3 Cicer arietinum L. HOM05D006680 ORTHO05D008206 1.7e-35 152.9 97 83.5
Gohir.A10G164900 Gossypium hirsutum HOM05D006680 ORTHO05D008206 1.7e-35 152.9 95 83.2
Gohir.D10G171100 Gossypium hirsutum HOM05D006680 ORTHO05D008206 1.7e-35 152.9 95 83.2
Gorai.011G191100 Gossypium raimondii HOM05D006680 ORTHO05D008206 1.7e-35 152.9 95 83.2
Cpa.g.sc16.184 Carica papaya HOM05D006680 ORTHO05D008206 4.9e-35 151.4 92 85.9
MD13G1167200 Malus domestica HOM05D006680 ORTHO05D008206 6.4e-35 151.0 97 83.5
ClCG00G005610 Citrullus lanatus HOM05D006680 ORTHO05D008206 1.9e-34 149.4 92 81.5
Manes.03G196700 Manihot esculenta HOM05D006680 ORTHO05D008206 1.9e-34 149.4 92 82.6
Thecc.04G286300 Theobroma cacao HOM05D006680 ORTHO05D008206 1.9e-34 149.4 95 80.0
Prupe.1G134500 Prunus persica HOM05D006680 ORTHO05D008206 5.4e-34 147.9 96 78.1
Glyma.07G246700 Glycine max HOM05D006680 ORTHO05D008206 7.0e-34 147.5 97 80.4
TWI09G0327 Tripterygium wilfordii HOM05D006680 ORTHO05D008206 7.0e-34 147.5 96 78.1
Manes.15G011600 Manihot esculenta HOM05D006680 ORTHO05D008206 9.2e-34 147.1 92 80.4
Thhalv10021931m.g Eutrema salsugineum HOM05D006680 ORTHO05D008206 2.1e-33 146.0 97 79.4
THA.LOC104818922 Tarenaya hassleriana HOM05D006680 ORTHO05D008206 2.7e-33 145.6 96 77.1
Ciclev10006049m.g Citrus clementina HOM05D006680 ORTHO05D008206 3.5e-33 145.2 92 79.3
Gohir.A09G238300 Gossypium hirsutum HOM05D006680 ORTHO05D008206 3.5e-33 145.2 97 81.4
CARHR081510 Cardamine hirsuta HOM05D006680 ORTHO05D008206 4.6e-33 144.8 95 76.8
QL06p009590 Quercus lobata HOM05D006680 ORTHO05D008206 4.6e-33 144.8 95 81.1
Carub.0003s0642 Capsella rubella HOM05D006680 ORTHO05D008206 6.0e-33 144.4 95 76.8
CiPaw.01G147500 Carya illinoinensis HOM05D006680 ORTHO05D008206 6.0e-33 144.4 97 79.4
Gohir.D09G239200 Gossypium hirsutum HOM05D006680 ORTHO05D008206 7.8e-33 144.1 97 80.4
Gorai.006G261900 Gossypium raimondii HOM05D006680 ORTHO05D008206 7.8e-33 144.1 97 80.4
Dinv29759 Davidia involucrata HOM05D006680 ORTHO05D008206 1.3e-32 143.3 92 79.3
Sabra10G0008200 Salix brachista HOM05D006680 ORTHO05D008206 1.3e-32 143.3 92 78.3
AT3G06890 Arabidopsis thaliana HOM05D006680 ORTHO05D008206 1.7e-32 142.9 95 75.8
RcHm_v2.0_Chr4g0422811 Rosa chinensis HOM05D006680 ORTHO05D008206 1.7e-32 142.9 95 76.8
A03p34950 Brassica napus HOM05D006680 ORTHO05D008206 2.3e-32 142.5 96 79.2
C03p42530 Brassica napus HOM05D006680 ORTHO05D008206 2.3e-32 142.5 96 79.2
BolC3t16523H Brassica oleracea HOM05D006680 ORTHO05D008206 2.3e-32 142.5 96 79.2
BraA03t12675Z Brassica rapa HOM05D006680 ORTHO05D008206 2.3e-32 142.5 96 79.2
AL3G18020 Arabidopsis lyrata HOM05D006680 ORTHO05D008206 3.0e-32 142.1 95 75.8
BcaC05g29822 Brassica carinata HOM05D006680 ORTHO05D008206 3.9e-32 141.7 96 78.1
BolC5t34701H Brassica oleracea HOM05D006680 ORTHO05D008206 3.9e-32 141.7 96 78.1
BraA05t22848Z Brassica rapa HOM05D006680 ORTHO05D008206 3.9e-32 141.7 97 77.3
Cc03_g01760 Coffea canephora HOM05D006680 ORTHO05D008206 3.9e-32 141.7 91 79.1
Duzib151G0306 Durio zibethinus HOM05D006680 ORTHO05D008206 6.6e-32 141.0 98 79.6
Oeu063359.1 Olea europaea HOM05D006680 ORTHO05D008206 6.6e-32 141.0 92 78.3
FvH4_4g18340 Fragaria vesca HOM05D006680 ORTHO05D008206 8.6e-32 140.6 95 73.7
FAN07G2082 Fragaria x ananassa HOM05D006680 ORTHO05D008206 8.6e-32 140.6 95 73.7
FAN12G3601 Fragaria x ananassa HOM05D006680 ORTHO05D008206 8.6e-32 140.6 95 73.7
FAN12G3976 Fragaria x ananassa HOM05D006680 ORTHO05D008206 8.6e-32 140.6 95 73.7
FAN17G1034 Fragaria x ananassa HOM05D006680 ORTHO05D008206 8.6e-32 140.6 95 73.7
A05p41250 Brassica napus HOM05D006680 ORTHO05D008206 1.1e-31 140.2 97 77.3
Atru.chr4.2870 Acer truncatum HOM05D006680 ORTHO05D008206 1.5e-31 139.8 92 76.1
Nitab4.5_0003466g0010 Nicotiana tabacum HOM05D006680 ORTHO05D008206 1.5e-31 139.8 95 74.7
Duzib212G0294 Durio zibethinus HOM05D006680 ORTHO05D008206 1.9e-31 139.4 96 77.1
Potri.008G221000 Populus trichocarpa HOM05D006680 ORTHO05D008206 1.9e-31 139.4 97 75.3
Oeu001107.1 Olea europaea HOM05D006680 ORTHO05D008206 3.3e-31 138.7 92 76.1
Peaxi162Scf00246g00103 Petunia axillaris HOM05D006680 ORTHO05D008206 5.6e-31 137.9 96 72.9
CANSAT78G1139 Cannabis sativa HOM05D006680 ORTHO05D008206 7.3e-31 137.5 91 75.8
CiPaw.02G082300 Carya illinoinensis HOM05D006680 ORTHO05D008206 9.5e-31 137.1 97 75.3
Potri.010G013100 Populus trichocarpa HOM05D006680 ORTHO05D008206 1.6e-30 136.3 97 73.2
Lalb_Chr13g0303561 Lupinus albus HOM05D006680 ORTHO05D008206 2.8e-30 135.6 96 71.9
Nitab4.5_0002761g0070 Nicotiana tabacum HOM05D006680 ORTHO05D008206 2.8e-30 135.6 92 73.9
Sp3g05850 Schrenkiella parvula HOM05D006680 ORTHO05D008206 2.8e-30 135.6 97 73.2
Peaxi162Scf00646g00027 Petunia axillaris HOM05D006680 ORTHO05D008206 3.6e-30 135.2 95 73.7
Migut.G00148 Erythranthe guttata HOM05D006680 ORTHO05D008206 6.2e-30 134.4 92 73.9
Solyc12g099500.2 Solanum lycopersicum HOM05D006680 ORTHO05D008206 6.2e-30 134.4 94 72.3
Sopen12g034170 Solanum pennellii HOM05D006680 ORTHO05D008206 6.2e-30 134.4 94 72.3
Lalb_Chr07g0177791 Lupinus albus HOM05D006680 ORTHO05D008206 1.1e-29 133.7 94 72.3
CAN.G129.31 Capsicum annuum HOM05D006680 ORTHO05D008206 1.4e-29 133.3 92 72.8
Sopen01g028370 Solanum pennellii HOM05D006680 ORTHO05D008206 1.4e-29 133.3 92 71.7
Hma1.2p1_1185F.1_g265000 Hydrangea macrophylla HOM05D006680 ORTHO05D008206 1.8e-29 132.9 96 68.8
DCAR_002469 Daucus carota HOM05D006680 ORTHO05D008206 8.9e-29 130.6 98 68.4
DCAR_027070 Daucus carota HOM05D006680 ORTHO05D008206 8.9e-29 130.6 94 70.2
PGSC0003DMG400004705 Solanum tuberosum HOM05D006680 ORTHO05D008206 1.2e-28 130.2 96 70.8
PGSC0003DMG400011317 Solanum tuberosum HOM05D006680 ORTHO05D008206 1.5e-28 129.8 92 68.5
CAN.G484.39 Capsicum annuum HOM05D006680 ORTHO05D008206 2.0e-28 129.4 95 69.5
ECA240G4018 Erigeron canadensis HOM05D006680 ORTHO05D008206 3.4e-28 128.6 94 68.1
Sed0015603 Sechium edule HOM05D006680 ORTHO05D008206 3.4e-28 128.6 91 69.2
MSTRG.3906 Avicennia marina HOM05D006680 ORTHO05D008206 4.4e-28 128.3 95 67.4
Lsat_1_v5_gn_6_95660 Lactuca sativa HOM05D006680 ORTHO05D008206 5.8e-28 127.9 94 68.1
TAR370G0002 Trochodendron aralioides HOM05D006680 ORTHO05D008206 1.3e-27 126.7 93 72.0
SGA_v2.0_scaffold67G22622 Striga asiatica HOM05D006680 ORTHO05D008206 2.9e-27 125.6 92 67.4
Aqoxy2G02951 Aquilegia oxysepala HOM05D006680 ORTHO05D008206 3.7e-27 125.2 95 68.4
Sc19g0005290 Simmondsia chinensis HOM05D006680 ORTHO05D008206 8.3e-27 124.0 96 72.9
Sc19g0005370 Simmondsia chinensis HOM05D006680 ORTHO05D008206 8.3e-27 124.0 96 72.9
Ah.08g214570 Amaranthus hybridus HOM05D006680 ORTHO05D008206 2.4e-26 122.5 94 69.1
CSS0014864 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 2.4e-26 122.5 93 68.8
CSS0010580 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 4.1e-26 121.7 93 68.8
Nn4g25792 Nelumbo nucifera HOM05D006680 ORTHO05D008206 1.2e-25 120.2 96 63.5
PGR004G0310 Punica granatum HOM05D006680 ORTHO05D008206 1.2e-25 120.2 95 68.4
AUR62040379 Chenopodium quinoa HOM05D006680 ORTHO05D008206 3.5e-25 118.6 94 66.0
MBI19_g25353_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 3.5e-25 118.6 92 64.1
PSO170G5007 Papaver somniferum HOM05D006680 ORTHO05D008206 3.5e-25 118.6 95 68.4
Sabra10G0008300 Salix brachista HOM05D006680 ORTHO05D008206 6.0e-25 117.9 96 64.6
PSO017G4993 Papaver somniferum HOM05D006680 ORTHO05D008206 7.8e-25 117.5 95 67.4
Nn3g21479 Nelumbo nucifera HOM05D006680 ORTHO05D008206 3.0e-24 115.5 84 69.0
Thecc.09G272700 Theobroma cacao HOM05D006680 ORTHO05D008206 8.6e-24 114.0 74 77.0
PGR031G3343 Punica granatum HOM05D006680 ORTHO05D008206 1.1e-23 113.6 94 59.6
PSO832G1781 Papaver somniferum HOM05D006680 ORTHO05D008206 2.5e-23 112.5 102 61.8
HPP92_000110 Vanilla planifolia HOM05D006680 ORTHO05D008206 4.3e-23 111.7 94 67.0
HanXRQChr13g0419971 Helianthus annuus HOM05D006680 ORTHO05D008206 5.6e-23 111.3 95 60.0
DCAR_030521 Daucus carota HOM05D006680 ORTHO05D008206 7.3e-23 110.9 98 62.2
MBI18_g06870_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 7.3e-23 110.9 96 64.6
Rhsim04G0223700 Rhododendron simsii HOM05D006680 ORTHO05D008206 7.3e-23 110.9 94 61.7
Rhsim09G0007300 Rhododendron simsii HOM05D006680 ORTHO05D008206 7.3e-23 110.9 94 61.7
PSO210G6323 Papaver somniferum HOM05D006680 ORTHO05D008206 4.7e-22 108.2 102 61.8
Os03g0343800 Oryza sativa ssp. japonica HOM05D006680 ORTHO05D008206 1.4e-21 106.7 95 57.9
Thecc.05G268700 Theobroma cacao HOM05D006680 ORTHO05D008206 1.5e-20 103.2 74 71.6
ATR0796G044 Amborella trichopoda HOM05D006680 ORTHO05D008206 2.2e-19 99.4 96 57.3
MD16G1168200 Malus domestica HOM05D006680 ORTHO05D008206 2.9e-19 99.0 98 63.3
Zm00001eb016470 Zea mays HOM05D006680 ORTHO05D008206 1.4e-18 96.7 95 58.9
Zm00001eb124100 Zea mays HOM05D006680 ORTHO05D008206 2.1e-17 92.8 90 54.4
unitig_32.g11869 Utricularia gibba HOM05D006680 ORTHO05D008206 6.0e-17 91.3 89 62.9
Zm00001eb394930 Zea mays HOM05D006680 ORTHO05D008206 3.3e-15 85.5 74 62.2
HanXRQChr03g0089341 Helianthus annuus HOM05D006680 ORTHO05D008206 4.3e-15 85.1 94 48.9
Eucgr.H03932 Eucalyptus grandis HOM05D006680 ORTHO05D008206 2.8e-14 82.4 97 48.5
Os07g0673801 Oryza sativa ssp. japonica HOM05D006680 ORTHO05D008206 4.4e-12 75.1 88 47.7
TAR633G0386 Trochodendron aralioides HOM05D006680 ORTHO05D008206 1.1e-10 70.5 98 48.0
SalBow5G0837 Salvia bowleyana HOM05D006680 ORTHO05D008206 3.2e-10 68.9 95 49.5


User provided reference genes

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