Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G095500 Phaseolus vulgaris HOM05D005004 ORTHO05D006097 3.6e-68 261.5 140 100.0
VMungo1215G1361 Vigna mungo HOM05D005004 ORTHO05D006097 1.7e-57 226.1 136 86.8
Glyma.13G153600 Glycine max HOM05D005004 ORTHO05D006097 9.5e-53 210.3 136 82.4
arahy.Tifrunner.gnm1.ann1.8NC760 Arachis hypogaea HOM05D005004 ORTHO05D006097 2.1e-44 182.6 137 68.6
Medtr7g104600 Medicago truncatula HOM05D005004 ORTHO05D006097 6.2e-44 181.0 138 71.0
Lj1g0020740 Lotus japonicus HOM05D005004 ORTHO05D006097 2.0e-42 176.0 137 70.1
Lj1g0017616 Lotus japonicus HOM05D005004 ORTHO05D006097 4.6e-39 164.9 136 68.4
TWI53G1915 Tripterygium wilfordii HOM05D005004 ORTHO05D006097 3.0e-38 162.2 136 61.8
QL07p039017 Quercus lobata HOM05D005004 ORTHO05D006097 3.9e-38 161.8 136 61.0
Cpa.g.sc5.20 Carica papaya HOM05D005004 ORTHO05D006097 5.1e-38 161.4 139 60.4
QL07p038766 Quercus lobata HOM05D005004 ORTHO05D006097 8.7e-38 160.6 136 61.0
Duzib093G1830 Durio zibethinus HOM05D005004 ORTHO05D006097 1.1e-37 160.2 141 61.0
Psat3g033320 Pisum sativum HOM05D005004 ORTHO05D006097 1.5e-37 159.8 142 62.0
TPR.G30035 Trifolium pratense HOM05D005004 ORTHO05D006097 2.5e-37 159.1 136 62.5
Thecc.05G089000 Theobroma cacao HOM05D005004 ORTHO05D006097 3.3e-37 158.7 141 61.7
TWI77G0413 Tripterygium wilfordii HOM05D005004 ORTHO05D006097 3.3e-37 158.7 136 61.0
arahy.Tifrunner.gnm1.ann1.E5K2FZ Arachis hypogaea HOM05D005004 ORTHO05D006097 4.3e-37 158.3 166 56.6
CANSAT80G1737 Cannabis sativa HOM05D005004 ORTHO05D006097 9.6e-37 157.1 141 58.9
Haze_19610 Corylus avellana HOM05D005004 ORTHO05D006097 9.6e-37 157.1 137 63.5
Lalb_Chr25g0288321 Lupinus albus HOM05D005004 ORTHO05D006097 9.6e-37 157.1 136 62.5
COL.COLO4_29735 Corchorus olitorius HOM05D005004 ORTHO05D006097 1.3e-36 156.8 136 60.3
Duzib106G1905 Durio zibethinus HOM05D005004 ORTHO05D006097 2.8e-36 155.6 137 59.1
Gohir.A01G138100 Gossypium hirsutum HOM05D005004 ORTHO05D006097 3.6e-36 155.2 138 60.1
Dinv21208 Davidia involucrata HOM05D005004 ORTHO05D006097 4.8e-36 154.8 138 59.4
Lalb_Chr20g0111711 Lupinus albus HOM05D005004 ORTHO05D006097 6.2e-36 154.5 136 62.5
Eucgr.K02041 Eucalyptus grandis HOM05D005004 ORTHO05D006097 1.1e-35 153.7 135 57.8
Eucgr.L03536 Eucalyptus grandis HOM05D005004 ORTHO05D006097 1.1e-35 153.7 135 57.8
Gohir.A01G206300 Gossypium hirsutum HOM05D005004 ORTHO05D006097 2.4e-35 152.5 127 60.6
Gorai.002G158400 Gossypium raimondii HOM05D005004 ORTHO05D006097 4.0e-35 151.8 138 60.9
GSVIVG01033842001 Vitis vinifera HOM05D005004 ORTHO05D006097 4.0e-35 151.8 140 58.6
Gorai.002G239900 Gossypium raimondii HOM05D005004 ORTHO05D006097 5.3e-35 151.4 137 57.7
CiPaw.09G013900 Carya illinoinensis HOM05D005004 ORTHO05D006097 6.9e-35 151.0 140 63.6
Eucgr.C01891 Eucalyptus grandis HOM05D005004 ORTHO05D006097 9.0e-35 150.6 136 58.8
Manes.08G025200 Manihot esculenta HOM05D005004 ORTHO05D006097 9.0e-35 150.6 136 60.3
Gohir.D01G127800 Gossypium hirsutum HOM05D005004 ORTHO05D006097 1.2e-34 150.2 138 60.1
Gohir.D01G195700 Gossypium hirsutum HOM05D005004 ORTHO05D006097 1.2e-34 150.2 137 56.9
THA.LOC104826944 Tarenaya hassleriana HOM05D005004 ORTHO05D006097 1.5e-34 149.8 144 56.2
FvH4_6g18690 Fragaria vesca HOM05D005004 ORTHO05D006097 2.0e-34 149.4 138 60.9
FAN14G5527 Fragaria x ananassa HOM05D005004 ORTHO05D006097 2.0e-34 149.4 138 60.9
Nn6g34902 Nelumbo nucifera HOM05D005004 ORTHO05D006097 3.4e-34 148.7 136 57.4
Dinv31686 Davidia involucrata HOM05D005004 ORTHO05D006097 4.5e-34 148.3 138 55.8
Sed0022281 Sechium edule HOM05D005004 ORTHO05D006097 5.8e-34 147.9 129 60.5
Thhalv10014896m.g Eutrema salsugineum HOM05D005004 ORTHO05D006097 7.6e-34 147.5 139 56.8
Actinidia07927 Actinidia chinensis HOM05D005004 ORTHO05D006097 9.9e-34 147.1 126 58.7
Carub.0006s0286 Capsella rubella HOM05D005004 ORTHO05D006097 9.9e-34 147.1 138 56.5
FAN05G0382 Fragaria x ananassa HOM05D005004 ORTHO05D006097 1.3e-33 146.7 138 60.1
FAN05G5799 Fragaria x ananassa HOM05D005004 ORTHO05D006097 1.3e-33 146.7 138 60.1
TAR623G0616 Trochodendron aralioides HOM05D005004 ORTHO05D006097 1.3e-33 146.7 135 58.5
CSS0009320 Camellia sinensis var. sinensis HOM05D005004 ORTHO05D006097 1.7e-33 146.4 135 57.8
Ciclev10012954m.g Citrus clementina HOM05D005004 ORTHO05D006097 1.7e-33 146.4 142 57.0
TAR365G0253 Trochodendron aralioides HOM05D005004 ORTHO05D006097 1.7e-33 146.4 135 59.3
Actinidia05431 Actinidia chinensis HOM05D005004 ORTHO05D006097 2.2e-33 146.0 138 57.2
CsaV3_1G033770 Cucumis sativus L. HOM05D005004 ORTHO05D006097 2.2e-33 146.0 138 55.8
FAN02G1574 Fragaria x ananassa HOM05D005004 ORTHO05D006097 2.9e-33 145.6 138 60.1
AL6G13490 Arabidopsis lyrata HOM05D005004 ORTHO05D006097 3.8e-33 145.2 138 55.8
Sc20g0006290 Simmondsia chinensis HOM05D005004 ORTHO05D006097 3.8e-33 145.2 135 59.3
BcaC06g32094 Brassica carinata HOM05D005004 ORTHO05D006097 4.9e-33 144.8 139 55.4
FAN09G0264 Fragaria x ananassa HOM05D005004 ORTHO05D006097 4.9e-33 144.8 136 58.8
SalBow5G1155 Salvia bowleyana HOM05D005004 ORTHO05D006097 6.4e-33 144.4 135 58.5
CSS0031559 Camellia sinensis var. sinensis HOM05D005004 ORTHO05D006097 1.1e-32 143.7 139 57.6
Hma1.2p1_0232F.1_g097910 Hydrangea macrophylla HOM05D005004 ORTHO05D006097 1.1e-32 143.7 138 55.8
Atru.chr8.1540 Acer truncatum HOM05D005004 ORTHO05D006097 1.9e-32 142.9 142 57.0
C02p01610 Brassica napus HOM05D005004 ORTHO05D006097 1.9e-32 142.9 139 54.7
C09p73010 Brassica napus HOM05D005004 ORTHO05D006097 1.9e-32 142.9 139 54.7
BolC9t60036H Brassica oleracea HOM05D005004 ORTHO05D006097 1.9e-32 142.9 139 54.7
CsaV3_1G013480 Cucumis sativus L. HOM05D005004 ORTHO05D006097 1.9e-32 142.9 136 57.4
MBI17_g08354_MAGBIO Magnolia biondii HOM05D005004 ORTHO05D006097 1.9e-32 142.9 136 57.4
RcHm_v2.0_Chr3g0473661 Rosa chinensis HOM05D005004 ORTHO05D006097 1.9e-32 142.9 136 58.1
AT5G03905 Arabidopsis thaliana HOM05D005004 ORTHO05D006097 2.4e-32 142.5 138 54.3
BcaB05g21795 Brassica carinata HOM05D005004 ORTHO05D006097 3.2e-32 142.1 138 54.3
CARHR209350 Cardamine hirsuta HOM05D005004 ORTHO05D006097 3.2e-32 142.1 138 55.1
ClCG03G002740 Citrullus lanatus HOM05D005004 ORTHO05D006097 3.2e-32 142.1 151 54.3
MELO3C020686.2 Cucumis melo HOM05D005004 ORTHO05D006097 3.2e-32 142.1 138 52.9
BolC2t06126H Brassica oleracea HOM05D005004 ORTHO05D006097 4.2e-32 141.7 140 55.0
Ah.15g090870 Amaranthus hybridus HOM05D004140 ORTHO05D006116 7.1e-32 141.0 141 55.3
Potri.006G084300 Populus trichocarpa HOM05D005004 ORTHO05D006097 9.3e-32 140.6 138 55.1
Sed0018976 Sechium edule HOM05D005004 ORTHO05D006097 2.1e-31 139.4 138 52.2
MSTRG.10365 Avicennia marina HOM05D005004 ORTHO05D006097 2.7e-31 139.0 135 57.0
A10p32210 Brassica napus HOM05D005004 ORTHO05D006097 2.7e-31 139.0 141 55.3
BraA10t45264Z Brassica rapa HOM05D005004 ORTHO05D006097 2.7e-31 139.0 141 55.3
MD16G1269100 Malus domestica HOM05D005004 ORTHO05D006097 2.7e-31 139.0 140 60.0
PGR142G4351 Punica granatum HOM05D005004 ORTHO05D006097 2.7e-31 139.0 135 60.0
Aa31LG1G21370 Aethionema arabicum HOM05D005004 ORTHO05D006097 3.5e-31 138.7 141 53.9
ATR0174G014 Amborella trichopoda HOM05D005004 ORTHO05D006097 3.5e-31 138.7 95 70.5
BraA02t04792Z Brassica rapa HOM05D005004 ORTHO05D006097 3.5e-31 138.7 133 56.4
ClCG03G001800 Citrullus lanatus HOM05D005004 ORTHO05D006097 3.5e-31 138.7 152 53.3
BcaC03g12976 Brassica carinata HOM05D005004 ORTHO05D006097 4.6e-31 138.3 138 53.6
SGA_v2.0_scaffold184G39963 Striga asiatica HOM05D005004 ORTHO05D006097 4.6e-31 138.3 135 55.6
Aqoxy5G00209 Aquilegia oxysepala HOM05D005004 ORTHO05D006097 6.0e-31 137.9 135 57.0
Os08g0369700 Oryza sativa ssp. japonica HOM05D005004 ORTHO05D006097 6.0e-31 137.9 102 64.7
Nitab4.5_0004873g0070 Nicotiana tabacum HOM05D005004 ORTHO05D006097 1.0e-30 137.1 137 55.5
Prupe.5G046500 Prunus persica HOM05D005004 ORTHO05D006097 1.0e-30 137.1 138 60.1
MD06G1040300 Malus domestica HOM05D005004 ORTHO05D006097 1.3e-30 136.7 140 59.3
Migut.L01778 Erythranthe guttata HOM05D005004 ORTHO05D006097 2.3e-30 136.0 137 54.7
unitig_899.g15202 Utricularia gibba HOM05D005004 ORTHO05D006097 2.3e-30 136.0 135 56.3
Nitab4.5_0000368g0180 Nicotiana tabacum HOM05D005004 ORTHO05D006097 3.0e-30 135.6 135 56.3
Nitab4.5_0003512g0070 Nicotiana tabacum HOM05D005004 ORTHO05D006097 3.0e-30 135.6 125 59.2
Peaxi162Scf00673g00319 Petunia axillaris HOM05D005004 ORTHO05D006097 5.1e-30 134.8 125 57.6
Sp6g38820 Schrenkiella parvula HOM05D005004 ORTHO05D006097 6.7e-30 134.4 149 49.7
HPP92_018556 Vanilla planifolia HOM05D005004 ORTHO05D006097 6.7e-30 134.4 96 66.7
CDE02G2337 Ceratophyllum demersum HOM05D005004 ORTHO05D006097 1.1e-29 133.7 107 62.6
DCAR_009165 Daucus carota HOM05D005004 ORTHO05D006097 1.1e-29 133.7 131 55.7
Zm00001eb170730 Zea mays HOM05D005004 ORTHO05D006097 1.1e-29 133.7 127 57.5
CAN.G1164.37 Capsicum annuum HOM05D005004 ORTHO05D006097 1.5e-29 133.3 135 54.1
TAR369G1152 Trochodendron aralioides HOM05D005004 ORTHO05D006097 1.9e-29 132.9 87 72.4
CAN.G1715.5 Capsicum annuum HOM05D005004 ORTHO05D006097 2.5e-29 132.5 135 56.3
Cfa016606 Carpinus fangiana HOM05D005004 ORTHO05D006097 2.5e-29 132.5 117 62.4
HanXRQChr15g0491011 Helianthus annuus HOM05D005004 ORTHO05D006097 9.6e-29 130.6 138 53.6
Solyc01g100410.3 Solanum lycopersicum HOM05D005004 ORTHO05D006097 9.6e-29 130.6 135 53.3
Sopen01g043930 Solanum pennellii HOM05D005004 ORTHO05D006097 9.6e-29 130.6 135 53.3
PGSC0003DMG403002803 Solanum tuberosum HOM05D005004 ORTHO05D006097 9.6e-29 130.6 135 53.3
Sabra06G0064000 Salix brachista HOM05D005004 ORTHO05D006097 1.3e-28 130.2 157 49.7
HanXRQChr17g0554781 Helianthus annuus HOM05D005004 ORTHO05D006097 1.6e-28 129.8 138 52.2
Hund03985 Selenicereus undatus HOM05D005004 ORTHO05D006097 2.8e-28 129.0 144 52.1
SGA_v2.0_scaffold35G14070 Striga asiatica HOM05D005004 ORTHO05D006097 3.6e-28 128.6 142 52.8
CDE04G1264 Ceratophyllum demersum HOM05D005004 ORTHO05D006097 6.2e-28 127.9 107 61.7
Cc06_g05740 Coffea canephora HOM05D005004 ORTHO05D006097 6.2e-28 127.9 144 54.9
SEGI_14769 Sequoiadendron giganteum HOM05D005004 ORTHO05D006097 4.0e-27 125.2 105 61.9
Rhsim03G0075200 Rhododendron simsii HOM05D005004 ORTHO05D006097 5.3e-27 124.8 159 47.2
BcaC03g12974 Brassica carinata HOM05D007309 ORTHO05D006097 3.4e-26 122.1 82 73.2
PSO339G3768 Papaver somniferum HOM05D005004 ORTHO05D006097 5.8e-26 121.3 95 64.2
PSO384G4260 Papaver somniferum HOM05D005004 ORTHO05D006097 1.7e-25 119.8 123 56.9
EL10Ac7g16917 Beta vulgaris HOM05D005004 ORTHO05D006097 3.8e-25 118.6 80 71.2
AUR62006181 Chenopodium quinoa HOM05D005004 ORTHO05D006097 3.8e-25 118.6 91 63.7
Hma1.2p1_0580F.1_g182880 Hydrangea macrophylla HOM05D005004 ORTHO05D006097 1.1e-24 117.1 79 70.9
Aa31LG3G2670 Aethionema arabicum HOM05D005004 ORTHO05D006097 1.4e-24 116.7 109 53.2
AUR62028526 Chenopodium quinoa HOM05D005004 ORTHO05D006097 4.2e-24 115.2 80 70.0
Lj2A137T29 Lonicera japonica HOM05D005004 ORTHO05D006097 4.2e-24 115.2 81 70.4
Pp3c3_34710 Physcomitrium patens HOM05D005004 ORTHO05D006097 4.2e-24 115.2 107 55.1
vmacro07408 Vaccinium macrocarpon HOM05D005004 ORTHO05D006097 5.5e-24 114.8 86 66.3
SalBow5G4790 Salvia bowleyana HOM05D005004 ORTHO05D006097 7.9e-23 110.9 78 70.5
ECA236G3187 Erigeron canadensis HOM05D005004 ORTHO05D006097 6.7e-22 107.8 81 66.7
AagrBONN_evm.TU.Sc2ySwM_228.4176 Anthoceros agrestis HOM05D005004 ORTHO05D006097 8.7e-22 107.5 96 52.1
Zm00001eb042730 Zea mays HOM05D005004 ORTHO05D006097 1.1e-21 107.1 138 46.4
Lsat_1_v5_gn_8_77061 Lactuca sativa HOM05D004768 ORTHO05D005812 1.5e-21 106.7 124 47.6
Glyma.03G195800 Glycine max HOM05D005004 ORTHO05D006097 1.9e-21 106.3 99 59.6
CBR_g27757 Chara braunii HOM05D005004 ORTHO05D006097 2.5e-21 105.9 128 42.2
Mapoly0089s0053 Marchantia polymorpha HOM05D005004 ORTHO05D006097 7.4e-21 104.4 99 51.5
Os08g0363800 Oryza sativa ssp. japonica HOM05D005004 ORTHO05D006097 1.1e-19 100.5 65 70.8
MCO02G129 Micromonas commoda HOM05D005004 ORTHO05D006097 1.2e-18 97.1 94 50.0
SMO171G0092 Selaginella moellendorffii HOM05D005004 ORTHO05D006097 1.5e-18 96.7 76 55.3
Hma1.2p1_3639F.1_g337130 Hydrangea macrophylla HOM05D005004 ORTHO05D006097 2.6e-18 95.9 79 62.0
vmacro08717 Vaccinium macrocarpon HOM05D005004 ORTHO05D006097 1.6e-15 86.7 107 47.7
MSTRG.5844 Avicennia marina HOM05D005004 ORTHO05D006097 1.0e-14 84.0 99 49.5
PRCOL_00000026 Prasinoderma coloniale HOM05D005004 ORTHO05D006097 5.7e-13 78.2 120 40.0
Cre07.g349600 Chlamydomonas reinhardtii HOM05D005004 ORTHO05D006097 4.1e-11 72.0 117 39.3
Hma1.2p1_0235F.1_g098620 Hydrangea macrophylla HOM05D005004 ORTHO05D012020 5.9e-10 68.2 83 49.4
Pp3s30_920 Physcomitrium patens HOM05D002293 ORTHO05D006850 1.3e-09 67.0 103 35.9
Hma1.2p1_0160F.1_g071250 Hydrangea macrophylla HOM05D005004 ORTHO05D006097 2.9e-09 65.9 48 60.4
Haze_27657 Corylus avellana HOM05D005004 ORTHO05D006097 3.8e-09 65.5 87 36.8
Cc06_g20090 Coffea canephora HOM05D005004 ORTHO05D006097 4.2e-08 62.0 37 75.7
Glyma.05G184700 Glycine max HOM05D002293 ORTHO05D006850 2.1e-07 59.7 101 33.7
Pp3c2_12660 Physcomitrium patens HOM05D002293 ORTHO05D006850 2.3e-06 56.2 101 34.7
SEGI_15698 Sequoiadendron giganteum HOM05D002293 ORTHO05D006850 6.7e-06 54.7 106 33.0


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