Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G091900 Phaseolus vulgaris HOM05D007750 ORTHO05D009803 7.3e-114 414.5 206 100.0
Phvul.003G092000 Phaseolus vulgaris HOM05D007750 ORTHO05D009803 5.4e-109 398.3 201 98.5
VMungo1215G1573 Vigna mungo HOM05D007750 ORTHO05D009803 2.4e-96 356.3 191 91.1
Glyma.07G217200 Glycine max HOM05D007750 ORTHO05D009803 1.5e-82 310.5 206 76.7
Glyma.06G033500 Glycine max HOM05D007750 ORTHO05D009803 9.7e-82 307.8 206 76.2
Glyma.17G016400 Glycine max HOM05D007750 ORTHO05D009803 1.5e-79 300.4 206 75.2
Lj2g0016115 Lotus japonicus HOM05D007750 ORTHO05D009803 2.2e-73 280.0 206 70.9
TPR.G7494 Trifolium pratense HOM05D007750 ORTHO05D009803 4.8e-73 278.9 206 71.8
Psat1g083360 Pisum sativum HOM05D007750 ORTHO05D009803 3.4e-71 272.7 200 71.0
Ca_04398_v3 Cicer arietinum L. HOM05D007750 ORTHO05D009803 5.9e-71 271.9 206 69.4
Medtr6g022260 Medicago truncatula HOM05D007750 ORTHO05D009803 3.6e-68 262.7 205 67.8
arahy.Tifrunner.gnm1.ann1.T5BWJF Arachis hypogaea HOM05D007750 ORTHO05D009803 5.3e-64 248.8 196 66.3
arahy.Tifrunner.gnm1.ann1.7C1NTJ Arachis hypogaea HOM05D007750 ORTHO05D009803 1.0e-62 244.6 191 67.0
Lalb_Chr12g0196171 Lupinus albus HOM05D007750 ORTHO05D009803 8.5e-62 241.5 209 61.7
Haze_24099 Corylus avellana HOM05D007750 ORTHO05D009803 3.3e-58 229.6 206 58.7
TAR623G1496 Trochodendron aralioides HOM05D007750 ORTHO05D009803 2.2e-57 226.9 206 58.3
CANSAT54G1947 Cannabis sativa HOM05D007750 ORTHO05D009803 3.7e-57 226.1 206 56.3
Cfa011507 Carpinus fangiana HOM05D007750 ORTHO05D009803 1.1e-56 224.6 206 58.7
CiPaw.13G094000 Carya illinoinensis HOM05D007750 ORTHO05D009803 4.1e-56 222.6 206 57.8
Prupe.6G076800 Prunus persica HOM05D007750 ORTHO05D009803 1.2e-55 221.1 205 56.6
QL01p031803 Quercus lobata HOM05D007750 ORTHO05D009803 2.0e-55 220.3 206 57.3
GSVIVG01024955001 Vitis vinifera HOM05D007750 ORTHO05D009803 4.5e-55 219.2 200 57.0
CSS0037746 Camellia sinensis var. sinensis HOM05D007750 ORTHO05D009803 1.7e-54 217.2 206 55.3
RcHm_v2.0_Chr5g0064911 Rosa chinensis HOM05D007750 ORTHO05D009803 2.9e-54 216.5 206 55.3
FvH4_3g36170 Fragaria vesca HOM05D007750 ORTHO05D009803 2.5e-53 213.4 206 53.9
FAN21G3841 Fragaria x ananassa HOM05D007750 ORTHO05D009803 4.7e-52 209.1 192 55.7
FAN16G0393 Fragaria x ananassa HOM05D007750 ORTHO05D009803 8.0e-52 208.4 192 55.7
Manes.02G132900 Manihot esculenta HOM05D007750 ORTHO05D009803 8.0e-52 208.4 201 55.7
RcHm_v2.0_Chr5g0064671 Rosa chinensis HOM05D007750 ORTHO05D009803 6.7e-51 205.3 192 55.7
Glyma.07G257600 Glycine max HOM05D007750 ORTHO05D009803 1.2e-50 204.5 206 59.2
FAN25G2068 Fragaria x ananassa HOM05D007750 ORTHO05D009803 2.0e-50 203.8 192 54.7
FAN11G0214 Fragaria x ananassa HOM05D007750 ORTHO05D009803 1.3e-49 201.1 192 54.2
Duzib150G0757 Durio zibethinus HOM05D007750 ORTHO05D009803 2.8e-49 199.9 201 53.7
MD03G1092900 Malus domestica HOM05D007750 ORTHO05D009803 2.8e-49 199.9 206 52.4
Aqoxy496s001 Aquilegia oxysepala HOM05D007750 ORTHO05D009803 4.8e-49 199.1 207 52.7
Aqoxy4G02931 Aquilegia oxysepala HOM05D007750 ORTHO05D009803 4.8e-49 199.1 207 52.7
Aqoxy7G03815 Aquilegia oxysepala HOM05D007750 ORTHO05D009803 9.1e-48 194.9 207 51.2
Gohir.A03G042099 Gossypium hirsutum HOM05D007750 ORTHO05D009803 1.6e-47 194.1 200 52.0
Gorai.003G131800 Gossypium raimondii HOM05D007750 ORTHO05D009803 4.5e-47 192.6 200 51.5
Gohir.D03G125600 Gossypium hirsutum HOM05D007750 ORTHO05D009803 1.0e-46 191.4 200 51.5
BraA09t38312Z Brassica rapa HOM05D007750 ORTHO05D009803 1.3e-46 191.0 206 50.5
CARHR254670 Cardamine hirsuta HOM05D007750 ORTHO05D009803 1.7e-46 190.7 206 48.5
Thecc.09G321000 Theobroma cacao HOM05D007750 ORTHO05D009803 3.8e-46 189.5 193 52.8
A09p27430 Brassica napus HOM05D007750 ORTHO05D009803 5.0e-46 189.1 206 50.5
Thhalv10028537m.g Eutrema salsugineum HOM05D007750 ORTHO05D009803 6.5e-46 188.7 206 48.5
THA.LOC104801704 Tarenaya hassleriana HOM05D007750 ORTHO05D009803 8.5e-46 188.3 206 51.0
Cc01_g12900 Coffea canephora HOM05D007750 ORTHO05D009803 1.1e-45 188.0 206 47.6
Atru.chr3.3911 Acer truncatum HOM05D007750 ORTHO05D009803 1.5e-45 187.6 210 48.1
Cpa.g.sc81.142 Carica papaya HOM05D007750 ORTHO05D009803 2.1e-44 183.7 193 51.3
Carub.0006s3078 Capsella rubella HOM05D007750 ORTHO05D009803 3.6e-44 183.0 206 46.6
PGSC0003DMG400022754 Solanum tuberosum HOM05D007750 ORTHO05D009803 8.0e-44 181.8 206 45.6
CAN.G981.43 Capsicum annuum HOM05D007750 ORTHO05D009803 3.0e-43 179.9 205 47.8
C09p34750 Brassica napus HOM05D007750 ORTHO05D009803 4.0e-43 179.5 206 47.6
BolC9t56321H Brassica oleracea HOM05D007750 ORTHO05D009803 4.0e-43 179.5 206 47.6
Sp6g05780 Schrenkiella parvula HOM05D007750 ORTHO05D009803 4.0e-43 179.5 203 46.8
CSS0028051 Camellia sinensis var. sinensis HOM05D007750 ORTHO05D009803 1.5e-42 177.6 193 50.3
Sopen08g028580 Solanum pennellii HOM05D007750 ORTHO05D009803 3.4e-42 176.4 206 45.6
Nn1g04208 Nelumbo nucifera HOM05D007750 ORTHO05D009803 4.4e-42 176.0 207 47.3
Potri.017G131600 Populus trichocarpa HOM05D007750 ORTHO05D009803 9.8e-42 174.9 201 49.8
Aa31LG9G10670 Aethionema arabicum HOM05D007750 ORTHO05D009803 1.3e-41 174.5 205 45.4
MBI14_g36920_MAGBIO Magnolia biondii HOM05D002509 ORTHO05D002758 2.2e-41 173.7 200 48.0
Migut.N02392 Erythranthe guttata HOM05D007750 ORTHO05D009803 2.8e-41 173.3 209 45.0
Rhsim13G0082600 Rhododendron simsii HOM05D007750 ORTHO05D009803 3.5e-39 166.4 153 54.2
SalBow3G4043 Salvia bowleyana HOM05D007750 ORTHO05D009803 7.7e-39 165.2 206 45.1
SGA_v2.0_scaffold9G04983 Striga asiatica HOM05D007750 ORTHO05D009803 5.0e-38 162.5 202 42.1
Sc21g0005800 Simmondsia chinensis HOM05D007750 ORTHO05D009803 8.9e-35 151.8 199 41.2
AT4G11690 Arabidopsis thaliana HOM05D007750 ORTHO05D009803 8.3e-33 145.2 207 40.1
AUR62018631 Chenopodium quinoa HOM05D007750 ORTHO05D009803 5.4e-32 142.5 173 45.7
Actinidia07034 Actinidia chinensis HOM05D007750 ORTHO05D009803 5.9e-31 139.0 188 45.2
Sabra17G0109600 Salix brachista HOM05D007750 ORTHO05D009803 1.3e-30 137.9 113 59.3
Lj1P153T20 Lonicera japonica HOM05D007750 ORTHO05D009803 2.5e-29 133.7 110 57.3
BcaB01g01674 Brassica carinata HOM05D007750 ORTHO05D009803 5.6e-29 132.5 191 41.4
PGR083G0657 Punica granatum HOM05D007750 ORTHO05D009803 9.5e-29 131.7 205 42.0
ATR0559G149 Amborella trichopoda HOM05D007750 ORTHO05D009803 1.8e-27 127.5 212 36.8
COL.COLO4_18513 Corchorus olitorius HOM05D007750 ORTHO05D009803 6.4e-25 119.0 199 38.2
Ciclev10030066m.g Citrus clementina HOM05D007750 ORTHO05D009803 5.4e-24 115.9 204 38.7
ClCG09G016230 Citrullus lanatus HOM05D007750 ORTHO05D009803 8.6e-22 108.6 153 37.9
AL6G46300 Arabidopsis lyrata HOM05D007750 ORTHO05D009803 1.9e-21 107.5 85 58.8
AL6G46430 Arabidopsis lyrata HOM05D007750 ORTHO05D009803 1.9e-21 107.5 85 58.8
EL10Ac5g12003 Beta vulgaris HOM05D007750 ORTHO05D009803 1.4e-19 101.3 85 54.1
CsaV3_7G007090 Cucumis sativus L. HOM05D007750 ORTHO05D009803 2.6e-18 97.1 149 37.6
Oeu012315.1 Olea europaea HOM05D007750 ORTHO05D009803 1.1e-16 91.7 85 47.1
Hma1.2p1_0418F.1_g149220 Hydrangea macrophylla HOM05D007750 ORTHO05D009803 4.1e-16 89.7 58 67.2
Nitab4.5_0007891g0010 Nicotiana tabacum HOM05D007750 ORTHO05D009803 9.2e-16 88.6 85 49.4
Nitab4.5_0001714g0210 Nicotiana tabacum HOM05D007750 ORTHO05D009803 1.2e-15 88.2 85 49.4
Eucgr.H02967 Eucalyptus grandis HOM05D007750 ORTHO05D009803 6.2e-12 75.9 86 43.0
SEGI_21882 Sequoiadendron giganteum HOM05D007750 ORTHO05D009431 1.7e-09 67.8 138 30.4
COL.COLO4_16723 Corchorus olitorius HOM05D007551 ORTHO05D009424 2.7e-07 60.5 191 27.7
ATR0807G010 Amborella trichopoda HOM05D006556 ORTHO05D008146 4.6e-07 59.7 111 28.8
MELO3C011779.2 Cucumis melo HOM05D008657 ORTHO05D010869 4.6e-07 59.7 105 28.6
MBI01_g37800_MAGBIO Magnolia biondii HOM05D000891 ORTHO05D000761 6.0e-07 59.3 107 31.8
Aqoxy3G01152 Aquilegia oxysepala HOM05D007358 ORTHO05D009117 1.0e-06 58.5 114 26.3
Potri.002G243600 Populus trichocarpa HOM05D001779 ORTHO05D001753 1.0e-06 58.5 114 31.6
Thhalv10027579m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 2.3e-06 57.4 113 28.3
Lalb_Chr05g0214861 Lupinus albus HOM05D006556 ORTHO05D008146 2.3e-06 57.4 111 27.0
MBI05_g33300_MAGBIO Magnolia biondii HOM05D006556 ORTHO05D008146 3.0e-06 57.0 190 23.7
SalBow2G1681 Salvia bowleyana HOM05D000891 ORTHO05D000761 3.0e-06 57.0 107 32.7
SalBow2G3131 Salvia bowleyana HOM05D000891 ORTHO05D000761 3.0e-06 57.0 107 32.7
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 3.0e-06 57.0 108 27.8
CsaV3_5G006140 Cucumis sativus L. HOM05D005764 ORTHO05D006600 3.9e-06 56.6 165 24.2
Lsat_1_v5_gn_9_106260 Lactuca sativa HOM05D007455 ORTHO05D009431 3.9e-06 56.6 179 23.5
Nitab4.5_0003410g0050 Nicotiana tabacum HOM05D000891 ORTHO05D000761 3.9e-06 56.6 115 30.4
CsaV3_5G029290 Cucumis sativus L. HOM05D008657 ORTHO05D010869 5.1e-06 56.2 178 24.7
HPP92_005106 Vanilla planifolia HOM05D006556 ORTHO05D008146 5.1e-06 56.2 154 31.8
Gohir.D12G203200 Gossypium hirsutum HOM05D007551 ORTHO05D009424 6.6e-06 55.8 152 27.6
Prupe.2G066000 Prunus persica HOM05D006556 ORTHO05D008146 6.6e-06 55.8 110 25.5
Prupe.8G019300 Prunus persica HOM05D007083 ORTHO05D008801 6.6e-06 55.8 103 25.2
SGA_v2.0_scaffold171G38942 Striga asiatica HOM05D001779 ORTHO05D001753 6.6e-06 55.8 111 27.9
Ah.02g114120 Amaranthus hybridus HOM05D006556 ORTHO05D008146 8.6e-06 55.5 87 32.2
Cpa.g.sc8.143 Carica papaya HOM05D001779 ORTHO05D001753 8.6e-06 55.5 111 28.8
Ca_20820_v3 Cicer arietinum L. HOM05D007083 ORTHO05D008801 8.6e-06 55.5 120 25.8
ECA238G2994 Erigeron canadensis HOM05D004933 ORTHO05D005465 8.6e-06 55.5 96 29.2
Eucgr.K02161 Eucalyptus grandis HOM05D001779 ORTHO05D001753 8.6e-06 55.5 110 30.0
HanXRQChr03g0091321 Helianthus annuus HOM05D000162 ORTHO05D000090 8.6e-06 55.5 95 34.7
Solyc02g085650.4 Solanum lycopersicum HOM05D001985 ORTHO05D000761 8.6e-06 55.5 115 27.8
PGSC0003DMG400040010 Solanum tuberosum HOM05D000891 ORTHO05D000761 8.6e-06 55.5 115 28.7
Thecc.03G322800 Theobroma cacao HOM05D007551 ORTHO05D009424 8.6e-06 55.5 177 27.7


User provided reference genes

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