Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 3.5e-141 505.0 261 100.0
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 8.9e-129 463.8 260 91.9
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 1.3e-111 406.8 261 79.7
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 1.8e-100 369.8 261 72.4
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 3.0e-100 369.0 218 79.4
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 5.6e-99 364.8 261 71.3
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 2.1e-98 362.8 219 80.8
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 9.0e-97 357.5 219 78.1
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 1.3e-95 353.6 214 77.6
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 1.7e-95 353.2 218 75.7
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 1.7e-95 353.2 222 75.7
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 6.5e-95 351.3 211 78.2
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 8.4e-95 350.9 222 75.2
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 8.4e-95 350.9 222 75.2
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 8.4e-95 350.9 216 75.9
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 8.4e-95 350.9 222 76.6
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 1.1e-94 350.5 222 75.7
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 3.2e-94 349.0 218 77.1
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 3.2e-94 349.0 218 77.1
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 3.2e-94 349.0 206 79.6
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 3.2e-94 349.0 214 77.1
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 5.5e-94 348.2 205 79.5
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 2.7e-93 345.9 199 83.4
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 6.0e-93 344.7 225 74.7
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 7.9e-93 344.4 221 74.2
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 7.9e-93 344.4 221 74.2
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 7.9e-93 344.4 222 74.3
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 1.8e-92 343.2 222 73.9
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 2.3e-92 342.8 222 73.0
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 2.3e-92 342.8 222 73.0
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 2.3e-92 342.8 222 73.0
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 3.9e-92 342.0 218 73.9
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 3.9e-92 342.0 218 73.9
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 6.7e-92 341.3 215 75.3
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 6.7e-92 341.3 218 74.3
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 1.5e-91 340.1 236 72.0
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 1.5e-91 340.1 224 75.0
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 1.9e-91 339.7 217 75.1
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 1.9e-91 339.7 219 74.4
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 3.3e-91 339.0 217 75.6
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 3.3e-91 339.0 213 74.6
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 7.4e-91 337.8 225 73.3
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 1.3e-90 337.0 218 72.9
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 1.3e-90 337.0 217 73.7
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 1.3e-90 337.0 217 73.7
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 1.6e-90 336.7 227 70.9
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 2.1e-90 336.3 214 73.8
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 2.1e-90 336.3 221 72.4
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 2.8e-90 335.9 218 72.0
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 2.8e-90 335.9 196 79.6
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 4.8e-90 335.1 206 80.1
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 4.8e-90 335.1 264 63.3
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 6.3e-90 334.7 218 73.9
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 8.2e-90 334.3 202 78.2
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 1.1e-89 334.0 204 77.5
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 1.4e-89 333.6 218 73.4
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 1.4e-89 333.6 218 72.9
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 2.4e-89 332.8 206 77.7
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 2.4e-89 332.8 202 78.2
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 9.0e-89 330.9 209 74.2
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 9.0e-89 330.9 219 73.5
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 9.0e-89 330.9 218 72.9
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 2.0e-88 329.7 222 70.3
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 7.6e-88 327.8 219 73.1
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.3e-87 327.0 196 79.6
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.3e-87 327.0 196 79.6
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 1.3e-87 327.0 207 76.3
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 2.9e-87 325.9 212 71.2
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 3.8e-87 325.5 196 79.1
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 4.2e-86 322.0 215 70.2
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 3.0e-84 315.8 203 77.3
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 3.0e-84 315.8 180 81.7
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 3.9e-84 315.5 197 74.6
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 3.3e-83 312.4 202 74.3
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 6.3e-82 308.1 191 75.4
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 4.1e-81 305.4 187 78.1
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 1.0e-79 300.8 271 57.2
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 8.5e-79 297.7 169 81.7
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 3.2e-78 295.8 263 63.9
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 1.6e-77 293.5 206 70.9
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 2.7e-77 292.7 198 70.2
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 4.6e-77 292.0 238 62.2
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 1.5e-75 287.0 281 54.1
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 2.5e-75 286.2 209 67.9
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 3.7e-74 282.3 167 79.0
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 3.2e-70 269.2 194 69.1
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 3.2e-70 269.2 175 72.0
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 5.5e-70 268.5 219 63.0
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 7.2e-70 268.1 208 64.9
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 9.4e-70 267.7 193 67.9
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 3.3e-67 259.2 207 60.4
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 1.3e-66 257.3 208 63.0
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 4.1e-65 252.3 199 59.8
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 4.5e-64 248.8 199 61.8
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 1.1e-59 234.2 220 55.9
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 5.7e-59 231.9 180 63.3
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 5.3e-57 225.3 199 55.8
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 5.0e-55 218.8 222 49.5
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 1.2e-48 197.6 144 69.4
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 6.5e-47 191.8 127 74.8
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 2.1e-45 186.8 218 47.2
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 6.6e-23 112.1 82 54.9
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 8.6e-23 111.7 139 43.9
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 2.8e-21 106.7 120 49.2
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 1.5e-19 100.9 80 66.2
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 8.3e-18 95.1 42 97.6
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.4e-17 94.4 69 58.0
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 4.1e-17 92.8 42 90.5
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 6.6e-15 85.5 41 90.2
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 8.6e-15 85.1 56 67.9
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 8.1e-13 78.6 42 81.0
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 2.2e-10 70.5 147 31.3
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 3.8e-10 69.7 47 66.0
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 1.0e-07 61.6 198 25.8


User provided reference genes

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