Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 1.9e-133 479.2 238 100.0
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 3.1e-128 461.8 238 95.4
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 1.5e-127 459.5 238 96.2
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 1.3e-123 446.4 237 93.7
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 5.6e-122 441.0 238 91.2
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 8.2e-121 437.2 237 90.7
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 3.1e-120 435.3 238 90.3
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 4.0e-120 434.9 239 91.2
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 4.0e-120 434.9 234 91.5
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 3.8e-118 428.3 235 89.4
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 4.9e-118 427.9 237 88.6
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 6.5e-118 427.6 233 89.7
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 6.5e-118 427.6 238 89.5
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 8.4e-118 427.2 239 88.7
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 2.5e-117 425.6 240 89.2
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 4.2e-117 424.9 232 89.7
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 1.2e-116 423.3 239 87.9
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 1.6e-116 422.9 237 87.3
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 3.5e-116 421.8 237 87.3
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 7.9e-116 420.6 231 89.6
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 1.0e-115 420.2 233 88.4
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 3.9e-115 418.3 238 88.2
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 6.7e-115 417.5 236 86.0
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 8.7e-115 417.2 244 88.1
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 8.7e-115 417.2 244 88.1
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 1.1e-114 416.8 239 86.6
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 1.1e-114 416.8 235 87.7
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 2.5e-114 415.6 232 87.9
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 4.3e-114 414.8 244 84.8
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 4.3e-114 414.8 231 89.2
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 7.4e-114 414.1 223 92.4
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.3e-113 413.3 239 85.8
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 2.2e-113 412.5 237 86.5
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 3.7e-113 411.8 224 90.2
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 6.3e-113 411.0 237 84.4
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 1.1e-112 410.2 238 87.8
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 1.4e-112 409.8 232 88.4
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.8e-112 409.5 222 90.5
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 3.1e-112 408.7 242 85.5
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 4.1e-112 408.3 226 88.5
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 1.2e-111 406.8 239 84.1
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 3.4e-111 405.2 236 83.5
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 4.5e-111 404.8 246 83.3
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 4.5e-111 404.8 236 83.5
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 1.0e-110 403.7 236 83.1
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 1.7e-110 402.9 235 84.7
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 5.0e-110 401.4 236 86.4
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 1.4e-109 399.8 236 84.3
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 9.4e-109 397.1 237 81.9
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 9.4e-109 397.1 237 81.9
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 3.6e-108 395.2 202 97.0
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 2.3e-107 392.5 243 83.1
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 3.9e-107 391.7 242 81.4
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 5.1e-107 391.3 241 79.7
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 1.9e-106 389.4 222 88.3
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 1.9e-106 389.4 241 81.3
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 2.5e-106 389.0 238 83.2
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 3.3e-106 388.7 237 82.7
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 1.3e-105 386.7 221 85.5
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 8.2e-105 384.0 240 83.3
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 8.2e-105 384.0 240 83.3
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 8.2e-105 384.0 239 82.4
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 1.1e-104 383.6 235 80.9
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 4.1e-104 381.7 226 85.4
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 7.2e-101 370.9 234 80.3
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.2e-100 370.2 234 80.3
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 4.8e-97 358.2 248 75.0
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 5.3e-96 354.8 232 73.3
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 3.4e-95 352.1 233 74.2
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.7e-94 349.7 230 71.3
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 1.7e-94 349.7 233 76.0
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 4.2e-93 345.1 235 74.0
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 1.2e-92 343.6 230 73.9
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 2.3e-91 339.3 235 71.5
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 3.0e-91 339.0 230 76.5
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 8.8e-91 337.4 197 84.8
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 1.1e-90 337.0 234 70.5
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 3.3e-90 335.5 249 71.1
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 4.4e-90 335.1 198 83.8
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 9.7e-90 334.0 234 74.8
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 1.7e-89 333.2 249 72.3
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 6.5e-86 321.2 199 80.9
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 2.5e-85 319.3 179 86.6
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 6.7e-83 311.2 227 69.6
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 6.5e-78 294.7 246 65.9
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 2.1e-76 289.7 223 70.0
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.0e-70 270.8 231 60.2
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.3e-65 253.8 165 80.6
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 1.7e-65 253.4 142 85.9
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 1.2e-63 247.3 139 89.2
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 3.8e-62 242.3 218 53.7
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 1.9e-61 240.0 150 78.7
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 1.2e-60 237.3 240 55.4
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 1.7e-57 226.9 218 52.8
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 8.7e-30 134.8 82 79.3
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 3.2e-24 116.3 223 34.5
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 2.5e-21 106.7 122 54.9
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 3.7e-12 76.3 57 66.7
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 1.4e-08 64.3 44 70.5


User provided reference genes

Program Settings