Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G090001 Phaseolus vulgaris HOM05D006132 ORTHO05D007305 8.7e-57 223.4 112 100.0
Phvul.009G112700 Phaseolus vulgaris HOM05D006132 ORTHO05D007305 2.2e-47 192.2 122 82.8
VMungo1309G3161 Vigna mungo HOM05D006132 ORTHO05D007305 5.0e-44 181.0 121 80.2
Glyma.06G088900 Glycine max HOM05D006132 ORTHO05D007305 6.7e-41 170.6 122 74.6
Glyma.04G087200 Glycine max HOM05D006132 ORTHO05D007305 4.3e-40 167.9 122 73.8
arahy.Tifrunner.gnm1.ann1.XPLI6K Arachis hypogaea HOM05D006132 ORTHO05D007305 1.2e-34 149.8 122 65.6
Medtr3g110417 Medicago truncatula HOM05D006132 ORTHO05D007305 1.2e-34 149.8 122 65.6
TPR.G12374 Trifolium pratense HOM05D006132 ORTHO05D007305 2.1e-34 149.1 122 65.6
Ca_15565_v3 Cicer arietinum L. HOM05D006132 ORTHO05D007305 6.1e-34 147.5 122 64.8
Lj1g0008631 Lotus japonicus HOM05D006132 ORTHO05D007305 1.8e-33 146.0 122 63.9
Psat0s3156g0040 Pisum sativum HOM05D006132 ORTHO05D007305 6.7e-33 144.1 122 64.8
Lalb_Chr08g0242871 Lupinus albus HOM05D006132 ORTHO05D007305 2.6e-32 142.1 122 63.1
Psat4g077000 Pisum sativum HOM05D006132 ORTHO05D007305 1.4e-30 136.3 122 62.3
arahy.Tifrunner.gnm1.ann1.GM174E Arachis hypogaea HOM05D006132 ORTHO05D007305 3.4e-29 131.7 86 74.4
Psat4g077080 Pisum sativum HOM05D006132 ORTHO05D007305 1.3e-28 129.8 122 60.7
QL12p040855 Quercus lobata HOM05D006132 ORTHO05D007305 2.0e-16 89.4 119 45.4
Atru.chr7.2044 Acer truncatum HOM05D006132 ORTHO05D007305 2.8e-15 85.5 119 42.9
Prupe.1G443500 Prunus persica HOM05D006132 ORTHO05D007305 6.3e-15 84.3 118 44.1
Thecc.09G049200 Theobroma cacao HOM05D006132 ORTHO05D007305 2.4e-14 82.4 125 39.2
Duzib168G1248 Durio zibethinus HOM05D006132 ORTHO05D007305 4.1e-14 81.6 125 38.4
FAN20G0110 Fragaria x ananassa HOM05D006132 ORTHO05D007305 4.1e-14 81.6 119 42.9
RcHm_v2.0_Chr6g0306811 Rosa chinensis HOM05D006132 ORTHO05D007305 5.3e-14 81.3 120 43.3
COL.COLO4_21010 Corchorus olitorius HOM05D006132 ORTHO05D007305 2.0e-13 79.3 121 40.5
CiPaw.07G201400 Carya illinoinensis HOM05D006132 ORTHO05D007305 2.7e-13 79.0 122 40.2
MD08G1108900 Malus domestica HOM05D006132 ORTHO05D007305 3.5e-13 78.6 117 41.9
Haze_01967 Corylus avellana HOM05D006132 ORTHO05D007305 1.3e-12 76.6 98 43.9
Sed0028022 Sechium edule HOM05D006132 ORTHO05D007305 1.7e-12 76.3 124 41.1
TAR636G1718 Trochodendron aralioides HOM05D006132 ORTHO05D007305 1.7e-12 76.3 119 37.0
FvH4_2g35140 Fragaria vesca HOM05D006132 ORTHO05D007305 6.5e-12 74.3 119 41.2
Ciclev10010526m.g Citrus clementina HOM05D006132 ORTHO05D007305 8.5e-12 73.9 98 43.9
Nn8g39007 Nelumbo nucifera HOM05D006132 ORTHO05D007305 1.1e-11 73.6 119 37.8
vmacro00180 Vaccinium macrocarpon HOM05D006132 ORTHO05D007305 1.5e-11 73.2 123 36.6
Gohir.A07G022180 Gossypium hirsutum HOM05D006132 ORTHO05D007305 1.9e-11 72.8 121 36.4
GSVIVG01035326001 Vitis vinifera HOM05D006132 ORTHO05D007305 2.5e-11 72.4 111 38.7
ClCG11G015000 Citrullus lanatus HOM05D006132 ORTHO05D007305 7.2e-11 70.9 120 40.0
Gorai.001G024600 Gossypium raimondii HOM05D006132 ORTHO05D007305 1.2e-10 70.1 125 34.4
MBI01_g01249_MAGBIO Magnolia biondii HOM05D006132 ORTHO05D007305 2.1e-10 69.3 119 33.6
Rhsim11G0049000 Rhododendron simsii HOM05D006132 ORTHO05D007305 3.6e-10 68.6 122 34.4
Dinv23402 Davidia involucrata HOM05D006132 ORTHO05D007305 4.7e-10 68.2 98 37.8
Gohir.D07G023900 Gossypium hirsutum HOM05D006132 ORTHO05D007305 4.7e-10 68.2 125 34.4
PSO210G7354 Papaver somniferum HOM05D006132 ORTHO05D007305 8.0e-10 67.4 119 36.1
Dinv02537 Davidia involucrata HOM05D006132 ORTHO05D007305 1.0e-09 67.0 98 37.8
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 3.0e-09 65.5 65 55.4
Sc09g0009530 Simmondsia chinensis HOM05D006132 ORTHO05D007305 5.2e-09 64.7 110 33.6
Migut.A00170 Erythranthe guttata HOM05D006132 ORTHO05D007305 8.8e-09 63.9 118 36.4
Aa31sc208G40 Aethionema arabicum HOM05D006132 ORTHO05D007305 1.2e-08 63.5 116 35.3
Actinidia01213 Actinidia chinensis HOM05D006132 ORTHO05D007305 2.0e-08 62.8 110 36.4
Cpa.g.sc7.235 Carica papaya HOM05D006132 ORTHO05D007305 2.0e-08 62.8 98 36.7
THA.LOC104818581 Tarenaya hassleriana HOM05D006132 ORTHO05D007305 2.0e-08 62.8 81 42.0
PSO210G2191 Papaver somniferum HOM05D006132 ORTHO05D007305 3.4e-08 62.0 119 34.5
Aqoxy7G03955 Aquilegia oxysepala HOM05D006132 ORTHO05D007305 5.7e-08 61.2 122 35.2
Psat6g116480 Pisum sativum HOM05D006132 ORTHO05D007305 7.5e-08 60.8 61 54.1
MELO3C003478.2 Cucumis melo HOM05D006132 ORTHO05D007305 9.8e-08 60.5 120 35.0
Ah.11g044450 Amaranthus hybridus HOM05D006132 ORTHO05D007305 1.7e-07 59.7 119 31.1
AL7G18910 Arabidopsis lyrata HOM05D006132 ORTHO05D007305 1.7e-07 59.7 86 38.4
CsaV3_3G048410 Cucumis sativus L. HOM05D006132 ORTHO05D007305 1.7e-07 59.7 120 35.8
Manes.03G057600 Manihot esculenta HOM05D006132 ORTHO05D007305 1.7e-07 59.7 119 34.5
MSTRG.25925 Avicennia marina HOM05D006132 ORTHO05D007305 2.2e-07 59.3 111 37.8
Lj8C561G12 Lonicera japonica HOM05D006132 ORTHO05D007305 6.3e-07 57.8 98 30.6
SGA_v2.0_scaffold103G30057 Striga asiatica HOM05D006132 ORTHO05D007305 8.3e-07 57.4 103 38.8
TWI34G0160 Tripterygium wilfordii HOM05D006132 ORTHO05D007305 8.3e-07 57.4 120 36.7
AT4G32820 Arabidopsis thaliana HOM05D006132 ORTHO05D007305 1.1e-06 57.0 98 35.7
Cc08_g10020 Coffea canephora HOM05D006132 ORTHO05D007305 1.1e-06 57.0 118 30.5
Eucgr.C00619 Eucalyptus grandis HOM05D006132 ORTHO05D007305 1.1e-06 57.0 98 32.7
Potri.018G057900 Populus trichocarpa HOM05D006132 ORTHO05D007305 1.4e-06 56.6 113 33.6
Hund19486 Selenicereus undatus HOM05D006132 ORTHO05D007305 2.4e-06 55.8 119 26.9
Aa31LG5G17300 Aethionema arabicum HOM05D006132 ORTHO05D007305 3.1e-06 55.5 117 31.6
PGR031G1631 Punica granatum HOM05D006132 ORTHO05D007305 3.1e-06 55.5 119 39.5
Carub.0007s0767 Capsella rubella HOM05D006132 ORTHO05D007305 5.4e-06 54.7 109 33.9
BolC1t00600H Brassica oleracea HOM05D006132 ORTHO05D007305 7.0e-06 54.3 86 34.9
Sp7g30590 Schrenkiella parvula HOM05D006132 ORTHO05D007305 7.0e-06 54.3 98 36.7
AUR62009214 Chenopodium quinoa HOM05D006132 ORTHO05D007305 9.1e-06 53.9 118 29.7
Oeu038827.1 Olea europaea HOM05D006132 ORTHO05D007305 9.1e-06 53.9 101 35.6


User provided reference genes

Program Settings