Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 6.4e-94 347.4 180 100.0
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 7.9e-76 287.3 180 82.2
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 6.3e-65 251.1 180 75.6
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 1.2e-60 236.9 168 76.2
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 5.2e-43 178.3 193 56.0
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 6.7e-43 177.9 201 54.7
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 1.5e-37 160.2 104 76.0
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 1.5e-37 160.2 190 52.1
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 4.2e-37 158.7 196 49.5
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 5.5e-37 158.3 114 70.2
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 7.2e-37 157.9 169 55.0
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 1.4e-35 153.7 114 68.4
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 1.8e-35 153.3 191 50.3
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 1.8e-35 153.3 109 69.7
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.8e-35 153.3 169 53.8
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 3.0e-35 152.5 126 62.7
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 4.0e-35 152.1 109 67.9
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 4.0e-35 152.1 109 68.8
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 5.2e-35 151.8 101 76.2
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 6.8e-35 151.4 117 65.0
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 1.5e-34 150.2 113 69.0
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 2.0e-34 149.8 114 66.7
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 3.4e-34 149.1 180 50.0
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 4.4e-34 148.7 150 54.7
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 5.7e-34 148.3 113 62.8
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 5.7e-34 148.3 108 66.7
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 5.7e-34 148.3 111 64.9
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 7.5e-34 147.9 109 66.1
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 7.5e-34 147.9 109 66.1
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 7.5e-34 147.9 109 65.1
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 7.5e-34 147.9 196 44.9
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 7.5e-34 147.9 126 60.3
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 9.8e-34 147.5 108 67.6
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 9.8e-34 147.5 114 64.9
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 1.3e-33 147.1 176 48.3
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 1.3e-33 147.1 105 70.5
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.3e-33 147.1 108 67.6
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.3e-33 147.1 108 67.6
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 1.3e-33 147.1 108 67.6
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 1.7e-33 146.7 141 56.7
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 1.7e-33 146.7 110 67.3
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 2.2e-33 146.4 110 67.3
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 2.2e-33 146.4 109 65.1
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 2.8e-33 146.0 124 62.9
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 2.8e-33 146.0 167 49.1
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 3.7e-33 145.6 108 64.8
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 3.7e-33 145.6 113 63.7
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 3.7e-33 145.6 193 45.1
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 3.7e-33 145.6 108 67.6
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 4.8e-33 145.2 130 56.9
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 6.3e-33 144.8 105 67.6
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 8.3e-33 144.4 109 62.4
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 1.1e-32 144.1 105 68.6
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 1.1e-32 144.1 105 68.6
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 1.1e-32 144.1 109 64.2
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 1.1e-32 144.1 109 62.4
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 1.8e-32 143.3 105 67.6
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 1.8e-32 143.3 105 67.6
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 1.8e-32 143.3 194 44.3
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 1.8e-32 143.3 109 64.2
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 1.8e-32 143.3 109 64.2
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 2.4e-32 142.9 96 74.0
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 3.1e-32 142.5 109 62.4
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 3.1e-32 142.5 116 61.2
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 4.1e-32 142.1 105 65.7
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 9.1e-32 141.0 158 48.7
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 1.2e-31 140.6 109 61.5
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 2.7e-31 139.4 114 60.5
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 3.5e-31 139.0 107 65.4
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 4.5e-31 138.7 108 63.0
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 5.9e-31 138.3 110 63.6
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 5.9e-31 138.3 110 63.6
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 1.0e-30 137.5 89 69.7
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.0e-30 137.5 108 56.5
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 1.3e-30 137.1 110 62.7
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 1.3e-30 137.1 111 62.2
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 1.7e-30 136.7 114 58.8
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.3e-30 136.3 109 63.3
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.3e-30 136.3 109 63.3
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 1.1e-29 134.0 213 40.4
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 2.5e-29 132.9 94 67.0
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 3.2e-29 132.5 86 72.1
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 4.2e-29 132.1 89 68.5
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 1.2e-28 130.6 108 58.3
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 2.8e-28 129.4 107 58.9
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 2.3e-27 126.3 107 55.1
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 2.8e-25 119.4 83 71.1
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 3.7e-25 119.0 98 58.2
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 1.1e-24 117.5 102 56.9
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 1.4e-24 117.1 93 57.0
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 3.1e-24 115.9 72 76.4
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 4.1e-24 115.5 102 56.9
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 5.4e-24 115.2 96 61.5
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 1.2e-23 114.0 127 51.2
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 1.7e-22 110.2 92 58.7
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 1.7e-22 110.2 84 65.5
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 6.6e-22 108.2 92 46.7
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 2.8e-20 102.8 98 49.0
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 4.7e-20 102.1 94 54.3
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 2.3e-19 99.8 75 61.3
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 8.9e-19 97.8 117 46.2
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 3.7e-17 92.4 87 47.1
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 7.0e-16 88.2 61 67.2
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 1.3e-09 67.4 52 65.4
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.4e-08 63.9 32 87.5
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 2.4e-08 63.2 44 65.9
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 7.8e-07 58.2 86 40.7


User provided reference genes

Program Settings