Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G085100 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 1.2e-68 263.1 135 100.0
VMungo1215G0069 Vigna mungo HOM05D004793 ORTHO05D004423 1.9e-50 202.6 135 79.3
Glyma.17G007500 Glycine max HOM05D004793 ORTHO05D004423 4.4e-47 191.4 136 77.9
Glyma.07G266600 Glycine max HOM05D004793 ORTHO05D004423 5.2e-40 167.9 137 71.5
Glyma.15G116700 Glycine max HOM05D004793 ORTHO05D004423 6.4e-30 134.4 146 57.5
Phvul.006G141500 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 5.4e-29 131.3 143 58.7
Glyma.09G012000 Glycine max HOM05D004793 ORTHO05D004423 1.3e-27 126.7 147 55.8
TPR.G6007 Trifolium pratense HOM05D004793 ORTHO05D004423 9.6e-26 120.6 154 57.1
Lj4g0015289 Lotus japonicus HOM05D004793 ORTHO05D004423 1.6e-25 119.8 142 56.3
Lalb_Chr15g0088081 Lupinus albus HOM05D004793 ORTHO05D004423 1.6e-25 119.8 144 58.3
VMungo0540G1724 Vigna mungo HOM05D004793 ORTHO05D004423 3.1e-24 115.5 142 52.1
Lj6g0021600 Lotus japonicus HOM05D004793 ORTHO05D004423 4.0e-24 115.2 137 56.9
TPR.G10593 Trifolium pratense HOM05D004793 ORTHO05D004423 2.6e-23 112.5 149 53.0
Psat1g178240 Pisum sativum HOM05D004793 ORTHO05D004423 3.8e-22 108.6 141 53.9
Medtr2g026510 Medicago truncatula HOM05D004793 ORTHO05D004423 6.4e-22 107.8 146 54.1
Psat4g002280 Pisum sativum HOM05D004793 ORTHO05D004423 3.2e-21 105.5 149 51.7
Medtr4g133720 Medicago truncatula HOM05D004793 ORTHO05D004423 7.1e-21 104.4 160 50.6
Cfa000070 Carpinus fangiana HOM05D004793 ORTHO05D004423 2.2e-14 82.8 135 43.7
QL05p068371 Quercus lobata HOM05D004793 ORTHO05D004423 2.9e-14 82.4 146 49.3
QL05p068872 Quercus lobata HOM05D004793 ORTHO05D004423 2.9e-14 82.4 146 48.6
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 4.9e-14 81.6 136 42.6
GSVIVG01002881001 Vitis vinifera HOM05D000222 ORTHO05D003997 3.5e-12 75.5 137 43.1
PGR004G1083 Punica granatum HOM05D004793 ORTHO05D004423 7.9e-12 74.3 146 41.8
Potri.016G009200 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.3e-11 73.6 142 38.0
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 6.7e-11 71.2 140 42.1
Potri.006G016500 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.5e-10 70.1 144 40.3
CiPaw.09G105400 Carya illinoinensis HOM05D004793 ORTHO05D004423 2.5e-10 69.3 164 38.4
Sabra16G0013200 Salix brachista HOM05D004793 ORTHO05D004423 5.6e-10 68.2 145 36.6
Sabra06G0011800 Salix brachista HOM05D004793 ORTHO05D004423 9.6e-10 67.4 143 37.8
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 9.6e-10 67.4 142 40.8
Thecc.07G019600 Theobroma cacao HOM05D004793 ORTHO05D004423 1.3e-09 67.0 128 43.0
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 2.1e-09 66.2 137 39.4
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 3.7e-09 65.5 138 42.0
Duzib192G0740 Durio zibethinus HOM05D004793 ORTHO05D004423 4.8e-09 65.1 140 38.6
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 6.2e-09 64.7 137 40.1
Sed0019930 Sechium edule HOM05D028401 ORTHO05D004423 1.1e-08 63.9 149 38.3
Duzib170G0463 Durio zibethinus HOM05D004793 ORTHO05D004423 1.4e-08 63.5 129 40.3
Duzib170G0743 Durio zibethinus HOM05D004793 ORTHO05D004423 1.4e-08 63.5 129 40.3
Eucgr.D01438 Eucalyptus grandis HOM05D004793 ORTHO05D004423 1.4e-08 63.5 149 40.3
CiPaw.10G079700 Carya illinoinensis HOM05D004793 ORTHO05D004423 1.8e-08 63.2 146 40.4
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 2.4e-08 62.8 140 40.0
CiPaw.11G201300 Carya illinoinensis HOM05D004793 ORTHO05D004423 3.1e-08 62.4 138 41.3
CSS0022938 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 4.0e-08 62.0 136 39.7
arahy.Tifrunner.gnm1.ann1.TPLS1U Arachis hypogaea HOM05D004793 ORTHO05D004423 5.3e-08 61.6 160 40.0
Cpa.g.sc2750.2 Carica papaya HOM05D004793 ORTHO05D004423 6.9e-08 61.2 145 40.0
arahy.Tifrunner.gnm1.ann1.QXLV0V Arachis hypogaea HOM05D004793 ORTHO05D004423 1.2e-07 60.5 160 39.4
CSS0013569 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 1.2e-07 60.5 123 40.7
CSS0021588 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 1.2e-07 60.5 136 38.2
Prupe.4G007200 Prunus persica HOM05D004793 ORTHO05D004423 1.5e-07 60.1 165 40.6
Gohir.D13G138400 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.0e-07 59.7 130 36.9
Gorai.013G155000 Gossypium raimondii HOM05D004793 ORTHO05D004423 2.0e-07 59.7 130 36.9
CiPaw.12G136200 Carya illinoinensis HOM05D004793 ORTHO05D004423 2.6e-07 59.3 145 38.6
Thecc.06G236700 Theobroma cacao HOM05D004793 ORTHO05D004423 2.6e-07 59.3 143 42.7
Gohir.A01G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 1.0e-06 57.4 129 38.0
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 1.3e-06 57.0 140 39.3
Cfa020226 Carpinus fangiana HOM05D004793 ORTHO05D004423 2.2e-06 56.2 128 40.6
Gohir.D01G074100 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.2e-06 56.2 129 38.0
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 2.9e-06 55.8 141 38.3
Prupe.3G201300 Prunus persica HOM05D004793 ORTHO05D004423 2.9e-06 55.8 146 39.0
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 4.9e-06 55.1 138 37.7
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 4.9e-06 55.1 139 35.3
CsaV3_7G018540 Cucumis sativus L. HOM05D004793 ORTHO05D004423 6.5e-06 54.7 128 35.2
Ciclev10017072m.g Citrus clementina HOM05D004793 ORTHO05D004423 8.4e-06 54.3 154 39.6
Gorai.010G188500 Gossypium raimondii HOM05D004793 ORTHO05D004423 8.4e-06 54.3 154 35.7


User provided reference genes

Program Settings