Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 2.4e-100 369.0 207 100.0
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 6.3e-77 291.2 208 82.2
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 5.9e-75 284.6 205 81.0
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 5.2e-71 271.6 212 75.0
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 3.1e-60 235.7 147 94.6
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 7.0e-60 234.6 207 68.6
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 1.3e-58 230.3 213 65.7
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 1.1e-57 227.3 212 66.5
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 3.6e-56 222.2 212 64.2
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 1.5e-54 216.9 209 61.7
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 4.8e-53 211.8 208 60.6
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 8.3e-53 211.1 213 54.0
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 9.1e-52 207.6 216 55.1
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 2.7e-51 206.1 208 57.2
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 4.5e-51 205.3 207 55.6
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 1.7e-50 203.4 211 55.9
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 5.0e-50 201.8 216 58.8
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 5.0e-50 201.8 207 54.6
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 6.5e-50 201.4 211 59.7
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 8.6e-50 201.1 203 53.2
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 8.6e-50 201.1 209 56.9
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 1.1e-49 200.7 181 61.9
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 7.2e-49 198.0 212 58.0
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 7.2e-49 198.0 213 57.3
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 1.6e-48 196.8 213 57.3
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 2.8e-48 196.1 209 56.5
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 4.7e-48 195.3 211 58.8
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 6.1e-48 194.9 211 58.8
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 6.1e-48 194.9 211 58.8
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 1.4e-47 193.7 207 56.0
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 1.8e-47 193.4 170 65.3
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 3.0e-47 192.6 206 52.4
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 4.0e-47 192.2 196 61.7
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 6.8e-47 191.4 212 54.7
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 8.9e-47 191.0 217 51.6
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 1.2e-46 190.7 213 57.3
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 2.0e-46 189.9 213 53.1
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 2.2e-45 186.4 269 43.1
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 2.8e-45 186.0 176 63.1
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 1.1e-44 184.1 215 51.6
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 1.4e-44 183.7 185 56.2
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 9.2e-44 181.0 212 50.5
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 2.7e-43 179.5 213 55.4
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.3e-42 177.2 214 50.0
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 8.6e-42 174.5 174 54.0
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 1.2e-40 170.6 214 47.7
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 1.6e-40 170.2 218 50.0
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 4.7e-40 168.7 214 47.7
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 4.7e-40 168.7 221 54.8
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 4.7e-40 168.7 175 56.6
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 4.7e-40 168.7 174 52.9
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 6.1e-40 168.3 210 46.7
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 5.2e-39 165.2 221 54.3
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 8.9e-39 164.5 156 62.2
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 1.2e-38 164.1 183 61.2
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 4.4e-38 162.2 175 54.3
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 5.8e-38 161.8 149 66.4
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 1.3e-37 160.6 149 55.7
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 2.2e-37 159.8 208 49.5
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 2.2e-37 159.8 165 61.2
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 1.9e-36 156.8 211 50.7
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 2.0e-35 153.3 215 47.9
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 4.6e-35 152.1 206 49.5
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 6.0e-35 151.8 167 59.3
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 3.9e-34 149.1 159 56.6
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 6.6e-34 148.3 175 52.6
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 3.3e-33 146.0 203 51.2
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 4.3e-33 145.6 175 56.0
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 4.3e-33 145.6 209 45.0
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 5.6e-33 145.2 174 56.9
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 2.1e-32 143.3 179 50.3
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 2.8e-32 142.9 167 57.5
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 2.8e-32 142.9 167 57.5
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 6.2e-32 141.7 167 58.1
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 6.2e-32 141.7 167 58.1
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 8.0e-32 141.4 210 49.0
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 8.0e-32 141.4 180 55.6
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 1.1e-31 141.0 148 61.5
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 1.1e-31 141.0 179 56.4
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 1.1e-31 141.0 179 56.4
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 2.3e-31 139.8 172 55.8
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 5.2e-31 138.7 207 46.4
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 3.4e-30 136.0 150 52.7
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 7.5e-30 134.8 174 55.2
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 7.5e-30 134.8 179 50.8
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 7.5e-30 134.8 151 50.3
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 1.3e-29 134.0 175 44.0
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 1.7e-29 133.7 159 56.0
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 3.7e-29 132.5 172 47.1
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 4.1e-28 129.0 126 63.5
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 2.1e-27 126.7 185 48.6
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 1.3e-26 124.0 126 52.4
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 1.1e-25 120.9 154 44.8
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 5.2e-23 112.1 140 56.4
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 5.8e-22 108.6 161 50.9
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 1.9e-20 103.6 126 56.3
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 7.8e-19 98.2 137 52.6
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 4.3e-17 92.4 199 36.2
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 5.6e-17 92.0 95 51.6
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 5.6e-17 92.0 95 51.6
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 5.6e-17 92.0 206 40.3
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 2.4e-15 86.7 213 29.6
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 4.9e-13 79.0 207 30.0
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 4.9e-13 79.0 164 43.9
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 2.7e-11 73.2 196 30.1
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 1.9e-09 67.0 188 37.2
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 7.6e-06 55.1 163 37.4
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 7.6e-06 55.1 163 37.4
A02p06060 Brassica napus HOM05D007192 ORTHO05D009034 9.9e-06 54.7 32 78.1


User provided reference genes

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