Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 8.8e-159 563.5 277 100.0
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 2.3e-151 538.9 277 95.3
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 4.5e-147 524.6 277 93.1
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 7.7e-147 523.9 279 92.1
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 6.6e-122 441.0 285 81.4
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 1.4e-119 433.3 282 79.4
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 3.1e-119 432.2 282 79.1
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 8.3e-117 424.1 291 77.0
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 2.8e-112 409.1 280 75.7
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 1.2e-110 403.7 284 76.1
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 5.8e-110 401.4 279 76.0
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 3.0e-106 389.0 278 69.8
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 3.3e-105 385.6 279 70.3
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 1.1e-100 370.5 280 68.6
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 1.2e-99 367.1 283 68.6
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 2.7e-99 365.9 277 67.5
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 3.5e-99 365.5 282 68.1
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 3.9e-98 362.1 278 67.6
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 5.1e-98 361.7 283 67.8
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 5.6e-97 358.2 244 74.2
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 9.6e-97 357.5 278 66.2
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 1.6e-96 356.7 281 68.0
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 6.2e-96 354.8 280 67.9
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 1.1e-95 354.0 233 74.7
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.4e-95 352.8 295 65.8
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 6.8e-95 351.3 281 66.2
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.5e-94 350.1 288 66.3
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 2.0e-94 349.7 230 75.2
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.6e-94 349.4 295 65.4
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 1.3e-93 347.1 280 64.3
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 1.3e-93 347.1 284 63.0
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 1.3e-93 347.1 230 75.7
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 2.2e-93 346.3 279 65.2
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 2.2e-93 346.3 268 66.8
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 2.2e-93 346.3 271 65.7
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 2.2e-93 346.3 279 63.8
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 2.9e-93 345.9 284 64.4
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 2.9e-93 345.9 278 64.4
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 3.8e-93 345.5 309 62.5
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 4.9e-93 345.1 295 64.7
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 4.9e-93 345.1 279 65.2
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 6.4e-93 344.7 279 63.8
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 8.4e-93 344.4 280 66.4
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 2.4e-92 342.8 231 77.9
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 2.4e-92 342.8 281 64.8
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 4.2e-92 342.0 234 75.2
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 7.1e-92 341.3 286 62.9
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 7.1e-92 341.3 275 66.2
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 9.3e-92 340.9 234 74.8
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 1.6e-91 340.1 279 64.9
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 6.0e-91 338.2 190 87.9
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 6.0e-91 338.2 283 62.5
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 7.8e-91 337.8 205 81.5
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.0e-90 337.4 280 64.3
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 1.7e-90 336.7 204 77.9
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 1.7e-90 336.7 216 77.3
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 2.3e-90 336.3 253 69.2
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 3.0e-90 335.9 266 65.0
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 5.1e-90 335.1 283 63.6
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 1.9e-89 333.2 278 64.4
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 1.9e-89 333.2 282 63.8
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 2.5e-89 332.8 279 62.4
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 2.1e-88 329.7 256 64.8
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 2.8e-88 329.3 270 64.8
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 8.1e-88 327.8 273 63.4
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 3.1e-87 325.9 278 64.0
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 3.1e-87 325.9 282 63.5
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 5.3e-87 325.1 225 74.7
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 5.3e-87 325.1 297 58.2
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 6.9e-87 324.7 228 71.5
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 9.0e-87 324.3 203 76.4
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 2.2e-85 319.7 216 72.7
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 4.9e-85 318.5 278 63.3
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 4.9e-85 318.5 245 65.3
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 3.2e-84 315.8 205 72.2
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 4.2e-84 315.5 278 60.1
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 3.5e-83 312.4 184 80.4
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 1.5e-81 307.0 192 76.6
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 1.5e-81 307.0 288 58.7
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 9.6e-81 304.3 214 72.0
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 1.8e-79 300.1 283 59.7
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 5.3e-79 298.5 223 67.7
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 6.9e-79 298.1 192 76.0
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 1.5e-78 297.0 245 62.9
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 1.5e-78 297.0 199 72.9
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 2.0e-78 296.6 229 66.8
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 1.3e-77 293.9 189 76.7
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 1.3e-77 293.9 189 76.7
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 1.3e-77 293.9 189 76.7
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 1.7e-77 293.5 198 73.2
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 2.9e-77 292.7 189 76.2
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 2.9e-77 292.7 192 74.5
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 1.3e-74 283.9 224 65.2
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 2.3e-74 283.1 279 58.1
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 1.3e-72 277.3 195 67.2
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 8.4e-69 264.6 244 57.0
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 1.1e-68 264.2 275 55.6
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 1.9e-68 263.5 275 55.6
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 2.7e-67 259.6 166 76.5
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 2.4e-63 246.5 187 62.0
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 1.2e-59 234.2 187 58.8
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 3.9e-50 202.6 121 82.6
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 1.7e-48 197.2 180 53.9
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 2.0e-46 190.3 130 70.8
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 4.2e-44 182.6 102 83.3
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 7.2e-36 155.2 93 81.7
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 2.7e-27 126.7 81 77.8
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 4.8e-24 115.9 159 44.7
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 2.4e-23 113.6 86 65.1
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.3e-21 107.8 96 58.3
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 7.0e-15 85.5 97 41.2
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 2.7e-14 83.6 87 50.6
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 5.2e-10 69.3 174 29.9
Nn1g08227 Nelumbo nucifera HOM05D006957 ORTHO05D008647 1.8e-07 60.8 118 39.8
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 2.4e-07 60.5 34 85.3


User provided reference genes

Program Settings