Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G077900 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 1.1e-50 203.0 102 100.0
Glyma.17G014200 Glycine max HOM05D008677 ORTHO05D002434 3.6e-33 144.8 128 60.9
Glyma.07G259800 Glycine max HOM05D008677 ORTHO05D002434 4.7e-33 144.4 126 62.7
VMungo1215G0276 Vigna mungo HOM05D008677 ORTHO05D002434 2.8e-30 135.2 123 63.4
Glyma.17G014500 Glycine max HOM05D008677 ORTHO05D002434 2.4e-29 132.1 129 57.4
Glyma.17G014100 Glycine max HOM05D008677 ORTHO05D002434 2.0e-28 129.0 129 62.0
Glyma.07G259700 Glycine max HOM05D008677 ORTHO05D002434 3.5e-28 128.3 127 57.5
Glyma.17G014400 Glycine max HOM05D008677 ORTHO05D002434 1.1e-26 123.2 120 59.2
Glyma.17G014600 Glycine max HOM05D008677 ORTHO05D002434 2.5e-26 122.1 130 55.4
VMungo1215G0105 Vigna mungo HOM05D008677 ORTHO05D002434 5.5e-26 120.9 126 56.3
Glyma.07G259900 Glycine max HOM05D008677 ORTHO05D002434 6.1e-25 117.5 127 56.7
Phvul.003G078000 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 3.4e-23 111.7 163 44.8
Lj4g0005888 Lotus japonicus HOM05D008677 ORTHO05D002434 6.3e-22 107.5 133 52.6
TPR.G9935 Trifolium pratense HOM05D008677 ORTHO05D002434 5.9e-20 100.9 129 48.1
Ca_00651_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 1.0e-19 100.1 132 48.5
VMungo1215G2206 Vigna mungo HOM05D008677 ORTHO05D002434 1.7e-19 99.4 123 49.6
Glyma.15G107300 Glycine max HOM05D008677 ORTHO05D002434 8.6e-19 97.1 130 48.5
Psat1g181240 Pisum sativum HOM05D008677 ORTHO05D002434 3.3e-18 95.1 132 49.2
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 1.2e-17 93.2 125 46.4
VMungo0540G1774 Vigna mungo HOM05D008677 ORTHO05D002434 1.2e-17 93.2 135 46.7
Medtr2g023010 Medicago truncatula HOM05D008677 ORTHO05D002434 8.0e-17 90.5 129 47.3
Lj6g0026915 Lotus japonicus HOM05D008677 ORTHO05D002434 5.2e-16 87.8 130 46.9
Medtr4g132000 Medicago truncatula HOM05D008677 ORTHO05D002434 5.8e-15 84.3 136 45.6
Phvul.006G150100 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 5.8e-15 84.3 131 45.0
Medtr4g132010 Medicago truncatula HOM05D008677 ORTHO05D002434 5.4e-13 77.8 138 43.5
Psat4g006760 Pisum sativum HOM05D008677 ORTHO05D002434 9.2e-13 77.0 144 43.8
Lalb_Chr18g0056321 Lupinus albus HOM05D008677 ORTHO05D002434 1.2e-12 76.6 120 41.7
Psat4g006720 Pisum sativum HOM05D008677 ORTHO05D002434 1.2e-12 76.6 142 43.0
Lalb_Chr07g0177261 Lupinus albus HOM05D008677 ORTHO05D002434 1.7e-11 72.8 149 40.3
Lalb_Chr07g0177271 Lupinus albus HOM05D008677 ORTHO05D002434 2.3e-11 72.4 141 40.4
Psat4g006840 Pisum sativum HOM05D008677 ORTHO05D002434 5.0e-11 71.2 123 42.3
Ca_21088_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 1.1e-10 70.1 159 35.8
Ca_30196_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 1.1e-10 70.1 159 35.8
Psat4g006800 Pisum sativum HOM05D008677 ORTHO05D002434 1.1e-10 70.1 141 40.4
Ca_00640_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 1.9e-10 69.3 109 45.9
arahy.Tifrunner.gnm1.ann1.PG586I Arachis hypogaea HOM05D008677 ORTHO05D002434 7.3e-10 67.4 143 37.1
Psat4g007000 Pisum sativum HOM05D008677 ORTHO05D002434 9.5e-10 67.0 132 40.2
TPR.G37017 Trifolium pratense HOM05D008677 ORTHO05D002434 1.1e-08 63.5 141 38.3
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 2.3e-08 62.4 128 35.9
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 4.0e-08 61.6 128 35.9
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 4.0e-08 61.6 128 35.9
arahy.Tifrunner.gnm1.ann1.8P9XRD Arachis hypogaea HOM05D008677 ORTHO05D002434 5.2e-08 61.2 135 35.6
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 5.2e-08 61.2 128 35.9
Solyc12g005000.1 Solanum lycopersicum HOM05D003074 ORTHO05D002434 1.5e-07 59.7 99 36.4
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 2.6e-07 58.9 118 37.3
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 2.6e-07 58.9 129 32.6
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 3.4e-07 58.5 119 34.5
BraA05t21736Z Brassica rapa HOM05D010457 ORTHO05D002434 7.5e-07 57.4 125 36.0
TPR.G36987 Trifolium pratense HOM05D008677 ORTHO05D002434 7.5e-07 57.4 149 35.6
CARHR095990 Cardamine hirsuta HOM05D003074 ORTHO05D002434 9.8e-07 57.0 117 35.9
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 1.3e-06 56.6 121 35.5
A05p28590 Brassica napus HOM05D010457 ORTHO05D002434 1.3e-06 56.6 125 35.2
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.7e-06 56.2 127 32.3
BcaC05g28318 Brassica carinata HOM05D010457 ORTHO05D002434 2.2e-06 55.8 126 34.1
C05p44000 Brassica napus HOM05D010457 ORTHO05D002434 2.2e-06 55.8 126 34.1
BolC5t33118H Brassica oleracea HOM05D010457 ORTHO05D002434 2.2e-06 55.8 126 34.1
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 2.2e-06 55.8 112 31.2
Sc16g0006080 Simmondsia chinensis HOM05D003074 ORTHO05D002434 2.9e-06 55.5 117 35.0
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 3.7e-06 55.1 107 38.3
BcaB06g26099 Brassica carinata HOM05D010457 ORTHO05D002434 3.7e-06 55.1 127 31.5
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 3.7e-06 55.1 132 34.8
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 6.4e-06 54.3 138 34.1
Psat4g006880 Pisum sativum HOM05D008677 ORTHO05D002434 6.4e-06 54.3 99 38.4
AUR62020442 Chenopodium quinoa HOM05D003074 ORTHO05D002434 8.3e-06 53.9 110 34.5
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 8.3e-06 53.9 112 32.1


User provided reference genes

Program Settings