Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 2.3e-276 954.9 465 100.0
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 6.9e-249 863.6 465 90.3
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 2.3e-220 768.8 445 85.2
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 6.1e-205 717.6 445 78.9
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 1.7e-199 699.5 392 84.4
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 8.8e-196 687.2 462 72.3
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 2.2e-194 682.6 432 77.5
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 5.0e-191 671.4 392 81.9
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 1.2e-189 666.8 470 70.6
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 1.2e-189 666.8 387 81.7
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 1.6e-189 666.4 405 78.0
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 2.1e-189 666.0 480 69.8
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.0e-188 663.7 405 77.5
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 1.4e-188 663.3 423 76.4
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 1.4e-188 663.3 387 79.8
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.2e-187 660.2 410 77.1
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 5.7e-187 657.9 387 78.6
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 4.9e-186 654.8 387 78.3
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 6.3e-186 654.4 406 75.1
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 8.3e-186 654.1 417 74.3
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 3.2e-185 652.1 387 79.1
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 7.0e-185 651.0 417 74.3
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 2.0e-184 649.4 458 69.4
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 5.9e-184 647.9 407 75.9
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 7.8e-184 647.5 385 78.4
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 1.3e-183 646.7 436 71.8
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 2.3e-183 646.0 387 78.8
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 5.0e-183 644.8 436 71.6
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 6.6e-183 644.4 387 77.0
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 8.6e-183 644.0 436 71.6
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 1.5e-182 643.3 432 72.5
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 5.6e-182 641.3 388 76.8
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 5.6e-182 641.3 390 77.2
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 5.6e-182 641.3 387 76.7
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 1.6e-181 639.8 387 77.5
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 4.7e-181 638.3 431 71.0
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 1.8e-180 636.3 434 70.3
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 5.2e-180 634.8 406 73.9
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 8.9e-180 634.0 384 76.8
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 1.2e-179 633.6 444 70.5
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 2.0e-179 632.9 472 65.3
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 2.6e-179 632.5 385 76.6
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 4.4e-179 631.7 390 74.9
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 1.3e-178 630.2 366 80.9
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 1.3e-178 630.2 387 76.5
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 2.2e-178 629.4 435 71.5
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 3.7e-178 628.6 386 74.6
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 4.9e-178 628.2 433 68.8
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 1.9e-177 626.3 397 74.1
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 4.1e-177 625.2 430 70.2
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 5.4e-177 624.8 402 72.6
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 1.2e-176 623.6 434 68.9
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 2.7e-176 622.5 386 74.4
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 6.0e-176 621.3 385 75.6
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 7.8e-176 620.9 402 74.4
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 1.0e-175 620.5 471 66.7
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 1.7e-175 619.8 403 73.9
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 1.7e-175 619.8 403 73.9
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 3.9e-175 618.6 407 70.0
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 5.0e-175 618.2 389 75.1
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 5.0e-175 618.2 403 73.7
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 6.6e-175 617.8 432 69.2
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 6.6e-175 617.8 397 73.0
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 8.6e-175 617.5 411 72.3
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 1.1e-174 617.1 389 74.3
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 1.5e-174 616.7 472 64.2
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 1.5e-174 616.7 387 74.2
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 5.6e-174 614.8 389 74.8
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 7.3e-174 614.4 364 78.0
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 9.5e-174 614.0 383 73.9
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 1.2e-173 613.6 389 74.8
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 2.1e-173 612.8 389 74.6
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 2.1e-173 612.8 389 74.3
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 1.1e-172 610.5 387 74.4
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 6.8e-172 607.8 385 72.7
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 8.9e-172 607.4 448 66.1
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 1.2e-171 607.1 399 71.4
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 5.8e-171 604.7 419 69.2
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 1.7e-170 603.2 491 62.1
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 6.4e-170 601.3 442 67.2
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 1.1e-169 600.5 440 65.7
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 1.5e-166 590.1 447 64.7
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 2.5e-166 589.3 443 65.2
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 2.6e-163 579.3 464 62.5
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 3.0e-159 565.8 392 67.1
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 2.4e-156 556.2 451 61.6
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 3.1e-156 555.8 369 70.7
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.1e-153 547.4 332 78.3
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 7.1e-153 544.7 411 63.5
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 2.5e-150 536.2 409 65.3
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 1.2e-144 517.3 366 68.3
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 2.7e-144 516.2 476 56.9
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 6.2e-141 505.0 372 64.2
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 1.8e-135 486.9 387 61.2
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 1.6e-125 453.8 408 55.9
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 6.7e-119 431.8 386 55.4
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 4.5e-115 419.1 259 82.6
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 4.1e-108 396.0 212 87.7
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 1.3e-93 347.8 454 41.9
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 1.7e-93 347.4 238 68.9
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 4.1e-92 342.8 383 45.7
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 1.6e-91 340.9 436 43.6
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 4.7e-88 329.3 216 74.5
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 6.8e-79 298.9 202 71.3
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 5.7e-78 295.8 321 51.1
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 1.1e-65 255.0 159 74.2
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 6.2e-64 249.2 155 76.1
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 4.4e-54 216.5 255 47.1
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 8.4e-45 185.7 128 67.2
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 4.9e-29 133.3 123 54.5
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 1.9e-28 131.3 206 41.7
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 3.0e-26 124.0 81 77.8
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 1.1e-25 122.1 75 74.7
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 3.3e-25 120.6 67 80.6
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 2.7e-19 100.9 99 55.6
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 7.9e-19 99.4 130 43.8
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 8.7e-18 95.9 84 52.4
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 3.1e-07 60.8 96 36.5


User provided reference genes

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