Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G065900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 4.5e-123 444.5 212 100.0
Phvul.003G065500 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 3.5e-67 258.8 161 75.2
Phvul.008G175400 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 4.5e-54 215.3 161 65.8
Phvul.007G142300 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 4.3e-49 198.7 161 62.1
Phvul.002G118700 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 5.3e-47 191.8 110 79.1
Phvul.003G138486 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 3.8e-37 159.1 96 77.1
Phvul.004G109100 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 8.0e-27 124.8 168 39.3
Phvul.003G122800 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 4.0e-26 122.5 143 42.0
Phvul.003G077500 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 5.2e-26 122.1 168 39.3
Phvul.007G113900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 4.4e-25 119.0 143 42.0
Phvul.007G133900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 4.8e-24 115.5 169 35.5
Phvul.001G132400 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 5.0e-21 105.5 136 36.8
Phvul.009G112900 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 6.5e-21 105.1 127 42.5
Phvul.005G066300 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 6.3e-16 88.6 168 33.9
Phvul.001G023000 Phaseolus vulgaris HOM05D009155 ORTHO05D004853 4.5e-14 82.4 139 33.8
Glyma.09G117500 Glycine max HOM05D005718 ORTHO05D004853 6.6e-13 78.6 131 36.6
TPR.G30395 Trifolium pratense HOM05D008332 ORTHO05D010135 6.6e-13 78.6 160 33.1
VMungo0647G0850 Vigna mungo HOM05D000410 ORTHO05D007231 6.6e-13 78.6 139 34.5
VMungo0720G1205 Vigna mungo HOM05D009855 ORTHO05D010135 8.6e-13 78.2 71 49.3
VMungo1309G2955 Vigna mungo HOM05D009855 ORTHO05D010135 8.6e-13 78.2 149 33.6
VMungo0496G0001 Vigna mungo HOM05D009855 ORTHO05D010135 1.9e-12 77.0 149 32.9
VMungo0331G1323 Vigna mungo HOM05D009155 ORTHO05D004853 2.5e-12 76.6 142 33.8
VMungo1383G1533 Vigna mungo HOM05D009155 ORTHO05D004853 5.6e-12 75.5 151 32.5
Medtr6g033460 Medicago truncatula HOM05D008332 ORTHO05D010135 7.3e-12 75.1 144 31.2
VMungo0331G1190 Vigna mungo HOM05D009155 ORTHO05D004853 1.6e-11 73.9 142 33.8
TPR.G18967 Trifolium pratense HOM05D008332 ORTHO05D010135 2.8e-11 73.2 160 31.2
TPR.G14040 Trifolium pratense HOM05D008332 ORTHO05D010135 3.6e-11 72.8 120 36.7
VMungo0647G1863 Vigna mungo HOM05D009155 ORTHO05D004853 3.6e-11 72.8 151 30.5
VMungo0251G0465 Vigna mungo HOM05D009155 ORTHO05D004853 8.0e-11 71.6 148 31.1
VMungo0647G1041 Vigna mungo HOM05D009155 ORTHO05D004853 8.0e-11 71.6 154 30.5
TPR.G38548 Trifolium pratense HOM05D008332 ORTHO05D010135 1.0e-10 71.2 160 30.6
VMungo0647G0491 Vigna mungo HOM05D009155 ORTHO05D004853 2.3e-10 70.1 156 28.2
TPR.G18935 Trifolium pratense HOM05D008332 ORTHO05D010135 4.0e-10 69.3 167 31.1
TPR.G8862 Trifolium pratense HOM05D008332 ORTHO05D010135 6.8e-10 68.6 104 35.6
Medtr7g031160 Medicago truncatula HOM05D008332 ORTHO05D010135 1.2e-09 67.8 141 29.8
TPR.G12046 Trifolium pratense HOM05D008332 ORTHO05D010135 1.5e-09 67.4 102 38.2
TPR.G22724 Trifolium pratense HOM05D008332 ORTHO05D010135 1.5e-09 67.4 160 30.0
TPR.G39889 Trifolium pratense HOM05D008332 ORTHO05D010135 2.0e-09 67.0 120 35.0
VMungo0720G2649 Vigna mungo HOM05D009155 ORTHO05D004853 3.4e-09 66.2 133 31.6
TPR.G8609 Trifolium pratense HOM05D005718 ORTHO05D004853 4.4e-09 65.9 158 28.5
Medtr2g083020 Medicago truncatula HOM05D008332 ORTHO05D010135 9.8e-09 64.7 160 30.0
Medtr7g024810 Medicago truncatula HOM05D008332 ORTHO05D010135 9.8e-09 64.7 160 30.0
Medtr6g012930 Medicago truncatula HOM05D008332 ORTHO05D010135 1.3e-08 64.3 160 30.0
Medtr6g014585 Medicago truncatula HOM05D008332 ORTHO05D010135 1.3e-08 64.3 156 30.8
TPR.G20348 Trifolium pratense HOM05D008332 ORTHO05D010135 1.3e-08 64.3 120 33.3
Medtr5g454250 Medicago truncatula HOM05D008332 ORTHO05D010135 2.2e-08 63.5 171 28.7
Phvul.004G078300 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 2.2e-08 63.5 103 34.0
Medtr2g009940 Medicago truncatula HOM05D008332 ORTHO05D010135 2.9e-08 63.2 160 29.4
TPR.G39718 Trifolium pratense HOM05D008332 ORTHO05D010135 2.9e-08 63.2 139 31.7
TPR.G62 Trifolium pratense HOM05D008332 ORTHO05D010135 4.9e-08 62.4 116 35.3
VMungo0251G1225 Vigna mungo HOM05D000014 ORTHO05D000016 8.3e-08 61.6 165 28.5
Medtr0019s0170 Medicago truncatula HOM05D008332 ORTHO05D010135 1.1e-07 61.2 137 32.1
TPR.G18912 Trifolium pratense HOM05D005718 ORTHO05D004853 1.4e-07 60.8 141 30.5
Medtr3g030280 Medicago truncatula HOM05D008332 ORTHO05D010135 1.8e-07 60.5 160 28.8
Phvul.001G121300 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 3.2e-07 59.7 88 31.8
VMungo0251G1724 Vigna mungo HOM05D009155 ORTHO05D004853 3.2e-07 59.7 128 32.8
Medtr0039s0050 Medicago truncatula HOM05D008332 ORTHO05D010135 1.2e-06 57.8 132 29.5
VMungo0331G0055 Vigna mungo HOM05D009155 ORTHO05D004853 2.0e-06 57.0 115 32.2
Medtr7g029850 Medicago truncatula HOM05D008332 ORTHO05D010135 2.7e-06 56.6 110 31.8
VMungo0331G0576 Vigna mungo HOM05D009155 ORTHO05D004853 7.8e-06 55.1 92 35.9
VMungo0464G1989 Vigna mungo HOM05D009155 ORTHO05D004853 7.8e-06 55.1 80 38.8


User provided reference genes

Program Settings