Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G065600 Phaseolus vulgaris HOM05D015555 ORTHO05D010310 1.4e-186 656.4 389 100.0
Phvul.002G203500 Phaseolus vulgaris HOM05D015555 ORTHO05D010310 9.4e-66 255.0 406 39.9
Phvul.004G040500 Phaseolus vulgaris HOM05D015555 ORTHO05D010310 3.5e-52 209.9 267 44.9
Phvul.003G085101 Phaseolus vulgaris HOM05D015555 ORTHO05D010310 2.2e-46 190.7 421 34.9
VMungo0251G2311 Vigna mungo HOM05D009237 ORTHO05D010310 1.8e-37 161.0 322 30.1
Phvul.005G102300 Phaseolus vulgaris HOM05D015555 ORTHO05D010310 2.1e-33 147.5 143 50.3
Lj1g0003267 Lotus japonicus HOM05D011422 ORTHO05D011575 2.6e-31 140.6 402 27.9
Lj5g0006938 Lotus japonicus HOM05D011422 ORTHO05D011575 2.1e-25 120.9 219 32.4
VMungo1127G1126 Vigna mungo HOM05D000005 ORTHO05D000012 2.1e-25 120.9 329 29.8
VMungo1309G1997 Vigna mungo HOM05D002593 ORTHO05D006476 2.8e-25 120.6 235 30.6
VMungo0540G0383 Vigna mungo HOM05D000040 ORTHO05D001305 5.2e-24 116.3 232 32.8
Phvul.006G066711 Phaseolus vulgaris HOM05D015555 ORTHO05D010310 1.5e-23 114.8 247 36.4
VMungo1309G1393 Vigna mungo HOM05D002362 ORTHO05D010310 2.9e-22 110.5 209 30.6
VMungo0464G1806 Vigna mungo HOM05D009237 ORTHO05D010310 6.4e-22 109.4 235 30.2
VMungo1383G1970 Vigna mungo HOM05D009237 ORTHO05D010310 8.3e-22 109.0 149 35.6
VMungo0540G0890 Vigna mungo HOM05D013610 ORTHO05D010310 1.4e-21 108.2 350 32.0
VMungo0720G1609 Vigna mungo HOM05D013610 ORTHO05D010310 3.2e-21 107.1 385 24.7
VMungo0647G2586 Vigna mungo HOM05D009237 ORTHO05D010310 1.6e-20 104.8 148 33.8
VMungo0464G1275 Vigna mungo HOM05D009237 ORTHO05D010310 5.0e-19 99.8 149 33.6
VMungo0540G2361 Vigna mungo HOM05D012259 ORTHO05D008631 2.9e-14 84.0 195 29.7
COL.COLO4_16369 Corchorus olitorius HOM05D000176 ORTHO05D000106 6.4e-14 82.8 241 27.4
Phvul.008G251750 Phaseolus vulgaris HOM05D015555 ORTHO05D010310 1.1e-13 82.0 133 35.3
Nitab4.5_0000381g0110 Nicotiana tabacum HOM05D000176 ORTHO05D000106 1.9e-13 81.3 260 25.8
VMungo0251G1137 Vigna mungo HOM05D012259 ORTHO05D008631 1.9e-13 81.3 195 29.2
VMungo1383G1008 Vigna mungo HOM05D012259 ORTHO05D008631 4.1e-13 80.1 195 28.7
VMungo1127G0057 Vigna mungo HOM05D008141 ORTHO05D008631 7.1e-13 79.3 173 30.6
VMungo1309G0517 Vigna mungo HOM05D008141 ORTHO05D008631 9.2e-13 79.0 309 24.3
VMungo1309G2316 Vigna mungo HOM05D008141 ORTHO05D008631 4.6e-12 76.6 153 31.4
TPR.G18321 Trifolium pratense HOM05D011422 ORTHO05D011575 5.1e-11 73.2 180 26.7
VMungo0720G0463 Vigna mungo HOM05D000002 ORTHO05D000001 8.6e-11 72.4 160 29.4
Gorai.011G127800 Gossypium raimondii HOM05D000176 ORTHO05D000106 1.5e-10 71.6 247 23.1
VMungo1309G0391 Vigna mungo HOM05D000750 ORTHO05D000714 1.5e-10 71.6 86 34.9
VMungo1309G2747 Vigna mungo HOM05D013610 ORTHO05D010310 1.5e-10 71.6 147 27.9
VMungo1215G1052 Vigna mungo HOM05D009237 ORTHO05D010310 2.5e-10 70.9 125 32.0
Actinidia29034 Actinidia chinensis HOM05D000176 ORTHO05D000106 3.3e-10 70.5 318 23.9
Rhsim05G0230300 Rhododendron simsii HOM05D000176 ORTHO05D000106 3.3e-10 70.5 200 27.0
Duzib151G0015 Durio zibethinus HOM05D000176 ORTHO05D000106 5.6e-10 69.7 241 24.9
TWI53G0034 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 5.6e-10 69.7 240 25.4
arahy.Tifrunner.gnm1.ann1.T1UFTC Arachis hypogaea HOM05D000176 ORTHO05D000106 7.3e-10 69.3 248 26.2
arahy.Tifrunner.gnm1.ann1.ULKS2B Arachis hypogaea HOM05D000176 ORTHO05D000106 7.3e-10 69.3 248 26.2
GSVIVG01030186001 Vitis vinifera HOM05D000176 ORTHO05D000106 7.3e-10 69.3 196 27.0
Dinv11360 Davidia involucrata HOM05D000176 ORTHO05D000106 9.5e-10 68.9 245 24.5
Cpa.g.sc0.116 Carica papaya HOM05D000176 ORTHO05D000106 1.6e-09 68.2 246 23.6
Nitab4.5_0008402g0020 Nicotiana tabacum HOM05D000176 ORTHO05D000106 2.1e-09 67.8 260 23.8
Medtr4g131860 Medicago truncatula HOM05D011422 ORTHO05D011575 4.7e-09 66.6 122 35.2
Medtr7g102530 Medicago truncatula HOM05D011422 ORTHO05D011575 4.7e-09 66.6 122 35.2
Sopen10g035120 Solanum pennellii HOM05D000176 ORTHO05D000106 1.1e-08 65.5 244 23.8
VMungo0331G0996 Vigna mungo HOM05D008141 ORTHO05D008631 1.1e-08 65.5 196 26.0
Medtr1g050140 Medicago truncatula HOM05D011422 ORTHO05D011575 1.4e-08 65.1 122 34.4
Medtr3g014760 Medicago truncatula HOM05D011422 ORTHO05D011575 1.4e-08 65.1 105 36.2
Dinv16983 Davidia involucrata HOM05D000176 ORTHO05D000106 3.1e-08 63.9 195 25.1
VMungo0251G1542 Vigna mungo HOM05D013610 ORTHO05D010310 3.1e-08 63.9 59 50.8
Sc02g0000190 Simmondsia chinensis HOM05D000176 ORTHO05D000106 4.0e-08 63.5 232 25.9
VMungo0464G0039 Vigna mungo HOM05D012259 ORTHO05D008631 5.2e-08 63.2 164 28.0
VMungo0251G3316 Vigna mungo HOM05D009237 ORTHO05D010310 6.8e-08 62.8 213 30.0
HanXRQChr06g0181031 Helianthus annuus HOM05D000176 ORTHO05D000106 8.9e-08 62.4 252 22.2
Peaxi162Scf00146g01211 Petunia axillaris HOM05D000176 ORTHO05D000106 2.0e-07 61.2 241 25.3
VMungo1383G2725 Vigna mungo HOM05D014901 ORTHO05D010310 2.6e-07 60.8 126 31.7
VMungo1080G0560 Vigna mungo HOM05D009237 ORTHO05D010310 4.4e-07 60.1 156 23.7
TPR.G22870 Trifolium pratense HOM05D002391 ORTHO05D011575 5.8e-07 59.7 216 25.9
Lalb_Chr12g0207711 Lupinus albus HOM05D000176 ORTHO05D000106 1.3e-06 58.5 243 24.7
Peaxi162Scf00286g00020 Petunia axillaris HOM05D000176 ORTHO05D000106 1.3e-06 58.5 148 27.0
PGR004G2764 Punica granatum HOM05D000176 ORTHO05D000106 1.7e-06 58.2 247 22.7
Lj3g0017762 Lotus japonicus HOM05D000176 ORTHO05D000106 3.7e-06 57.0 240 23.8
VMungo1127G1906 Vigna mungo HOM05D001068 ORTHO05D002190 3.7e-06 57.0 166 27.1
Solyc12g040813.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 6.4e-06 56.2 116 25.0
VMungo1309G2242 Vigna mungo HOM05D013610 ORTHO05D010310 6.4e-06 56.2 59 45.8
Peaxi162Scf00286g00015 Petunia axillaris HOM05D000176 ORTHO05D000106 8.4e-06 55.8 149 25.5
VMungo0720G1248 Vigna mungo HOM05D008141 ORTHO05D008631 8.4e-06 55.8 221 24.9


User provided reference genes

Program Settings