Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G059800 Phaseolus vulgaris HOM05D007607 ORTHO05D009603 1.3e-69 266.5 147 100.0
VMungo0251G2348 Vigna mungo HOM05D007607 ORTHO05D009603 3.7e-45 185.3 148 78.4
Glyma.07G206400 Glycine max HOM05D007607 ORTHO05D009603 9.1e-44 180.6 149 76.5
Glyma.02G138600 Glycine max HOM05D007607 ORTHO05D009603 1.5e-38 163.3 149 71.8
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 1.0e-31 140.6 147 53.7
Lalb_Chr16g0384371 Lupinus albus HOM05D007607 ORTHO05D009603 2.2e-29 132.9 146 58.9
Lj4g0023803 Lotus japonicus HOM05D007607 ORTHO05D009603 1.6e-27 126.7 148 56.8
Psat7g119360 Pisum sativum HOM05D007607 ORTHO05D009603 2.7e-27 125.9 151 59.6
TPR.G23536 Trifolium pratense HOM05D007607 ORTHO05D009603 2.9e-26 122.5 145 58.6
Medtr4g087540 Medicago truncatula HOM05D007607 ORTHO05D009603 4.4e-22 108.6 145 55.9
arahy.Tifrunner.gnm1.ann1.RJI6AK Arachis hypogaea HOM05D007607 ORTHO05D009603 6.3e-21 104.8 148 58.1
Dinv18311 Davidia involucrata HOM05D007607 ORTHO05D009603 1.8e-12 76.6 148 48.0
Duzib212G0637 Durio zibethinus HOM05D007607 ORTHO05D009603 3.1e-12 75.9 148 39.9
Gohir.D10G121500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 7.0e-12 74.7 147 43.5
Gorai.011G133600 Gossypium raimondii HOM05D007607 ORTHO05D009603 7.0e-12 74.7 147 43.5
Gohir.A10G145500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 1.2e-11 73.9 147 42.2
Ciclev10022842m.g Citrus clementina HOM05D007607 ORTHO05D009603 5.9e-11 71.6 145 44.8
Thecc.04G162800 Theobroma cacao HOM05D007607 ORTHO05D009603 2.9e-10 69.3 147 40.8
Actinidia28975 Actinidia chinensis HOM05D007607 ORTHO05D009603 8.6e-10 67.8 144 38.9
Haze_01353 Corylus avellana HOM05D007607 ORTHO05D009603 8.6e-10 67.8 143 42.0
CSS0037895 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 1.1e-09 67.4 143 44.1
RcHm_v2.0_Chr2g0085131 Rosa chinensis HOM05D007607 ORTHO05D009603 1.1e-09 67.4 147 45.6
FvH4_1g00500 Fragaria vesca HOM05D007607 ORTHO05D009603 2.5e-09 66.2 148 44.6
Potri.013G128700 Populus trichocarpa HOM05D007607 ORTHO05D009603 2.5e-09 66.2 145 43.4
Manes.05G131900 Manihot esculenta HOM05D007607 ORTHO05D009603 3.3e-09 65.9 146 44.5
TWI15G0968 Tripterygium wilfordii HOM05D007607 ORTHO05D009603 3.3e-09 65.9 143 42.7
Cfa015274 Carpinus fangiana HOM05D007607 ORTHO05D009603 4.3e-09 65.5 144 36.8
CiPaw.01G169900 Carya illinoinensis HOM05D007607 ORTHO05D009603 5.6e-09 65.1 142 42.3
ClCG11G013470 Citrullus lanatus HOM05D007607 ORTHO05D009603 5.6e-09 65.1 90 52.2
GSVIVG01038189001 Vitis vinifera HOM05D007607 ORTHO05D009603 7.3e-09 64.7 145 44.1
CSS0042213 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 2.1e-08 63.2 115 48.7
QL10p057428 Quercus lobata HOM05D007607 ORTHO05D009603 2.8e-08 62.8 78 59.0
Hund12359 Selenicereus undatus HOM05D007607 ORTHO05D009603 2.8e-08 62.8 100 47.0
CiPaw.02G100000 Carya illinoinensis HOM05D007607 ORTHO05D009603 3.6e-08 62.4 143 42.7
PGR142G0203 Punica granatum HOM05D007607 ORTHO05D009603 6.1e-08 61.6 147 42.9
ECA233G0487 Erigeron canadensis HOM05D007607 ORTHO05D009603 1.0e-07 60.8 77 48.1
HanXRQChr02g0059081 Helianthus annuus HOM05D007607 ORTHO05D009603 1.0e-07 60.8 105 42.9
CANSAT56G1551 Cannabis sativa HOM05D007607 ORTHO05D009603 1.4e-07 60.5 134 42.5
CAN.G1237.5 Capsicum annuum HOM05D007607 ORTHO05D009603 2.3e-07 59.7 147 40.1
Lsat_1_v5_gn_8_9141 Lactuca sativa HOM05D007607 ORTHO05D009603 3.0e-07 59.3 66 53.0
CsaV3_5G030090 Cucumis sativus L. HOM05D007607 ORTHO05D009603 4.0e-07 58.9 97 47.4
QL10p057723 Quercus lobata HOM05D007607 ORTHO05D009603 5.2e-07 58.5 78 57.7
THA.LOC104813690 Tarenaya hassleriana HOM05D007607 ORTHO05D009603 5.2e-07 58.5 100 48.0
Peaxi162Scf00883g00099 Petunia axillaris HOM05D007607 ORTHO05D009603 6.8e-07 58.2 143 42.0
MSTRG.24562 Avicennia marina HOM05D007607 ORTHO05D009603 8.9e-07 57.8 75 62.7
Cc03_g14540 Coffea canephora HOM05D007607 ORTHO05D009603 1.2e-06 57.4 79 60.8
Eucgr.H00285 Eucalyptus grandis HOM05D007607 ORTHO05D009603 1.2e-06 57.4 150 37.3
Solyc12g019550.2 Solanum lycopersicum HOM05D007607 ORTHO05D009603 1.2e-06 57.4 147 40.1
Cpa.g.sc343.4 Carica papaya HOM05D007607 ORTHO05D009603 1.5e-06 57.0 148 44.6
TAR362G0213 Trochodendron aralioides HOM05D007607 ORTHO05D009603 1.5e-06 57.0 150 43.3
MELO3C011848.2 Cucumis melo HOM05D007607 ORTHO05D009603 2.0e-06 56.6 147 36.7
PSO017G0391 Papaver somniferum HOM05D007607 ORTHO05D009603 2.6e-06 56.2 76 43.4
Sopen12g009810 Solanum pennellii HOM05D007607 ORTHO05D009603 2.6e-06 56.2 148 41.9
AUR62002416 Chenopodium quinoa HOM05D007607 ORTHO05D009603 3.4e-06 55.8 99 38.4
PSO675G5570 Papaver somniferum HOM05D007607 ORTHO05D009603 3.4e-06 55.8 76 43.4
PGSC0003DMG400029159 Solanum tuberosum HOM05D007607 ORTHO05D009603 3.4e-06 55.8 42 71.4
MSTRG.22043 Avicennia marina HOM05D007607 ORTHO05D009603 4.4e-06 55.5 110 42.7
Atru.chr4.1510 Acer truncatum HOM05D007607 ORTHO05D009603 5.8e-06 55.1 83 54.2
A07p15130 Brassica napus HOM05D007607 ORTHO05D009603 5.8e-06 55.1 100 46.0
Sed0020904 Sechium edule HOM05D007607 ORTHO05D009603 5.8e-06 55.1 75 38.7
Atru.chr4.1481 Acer truncatum HOM05D007607 ORTHO05D009603 7.5e-06 54.7 83 54.2
BcaC06g34863 Brassica carinata HOM05D007607 ORTHO05D009603 7.5e-06 54.7 100 48.0
BolC7t42778H Brassica oleracea HOM05D007607 ORTHO05D009603 7.5e-06 54.7 100 48.0
Nn7g37525 Nelumbo nucifera HOM05D007607 ORTHO05D009603 9.8e-06 54.3 54 74.1


User provided reference genes

Program Settings