Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G059600 Phaseolus vulgaris HOM05D005513 ORTHO05D006848 1.9e-178 629.0 311 100.0
VMungo0251G3259 Vigna mungo HOM05D005513 ORTHO05D006848 2.5e-170 602.1 311 95.8
Glyma.07G206300 Glycine max HOM05D005513 ORTHO05D006848 7.8e-164 580.5 315 91.4
Glyma.02G138700 Glycine max HOM05D005513 ORTHO05D006848 1.7e-163 579.3 316 90.8
Ca_18624_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 2.0e-159 565.8 312 89.4
Medtr4g087590 Medicago truncatula HOM05D005513 ORTHO05D006848 3.4e-159 565.1 313 89.1
Lalb_Chr16g0384361 Lupinus albus HOM05D005513 ORTHO05D006848 2.2e-158 562.4 316 88.3
Lj4g0013603 Lotus japonicus HOM05D005513 ORTHO05D006848 1.9e-157 559.3 316 88.0
TPR.G23516 Trifolium pratense HOM05D005513 ORTHO05D006848 7.8e-156 553.9 311 88.1
Psat7g119320 Pisum sativum HOM05D005513 ORTHO05D006848 8.6e-155 550.4 311 88.1
arahy.Tifrunner.gnm1.ann1.GC3WT6 Arachis hypogaea HOM05D005513 ORTHO05D006848 1.1e-154 550.1 313 86.6
arahy.Tifrunner.gnm1.ann1.GWB5D5 Arachis hypogaea HOM05D005513 ORTHO05D006848 1.1e-154 550.1 313 86.6
Ca_18630_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 6.0e-148 527.7 283 91.2
Ciclev10021262m.g Citrus clementina HOM05D005513 ORTHO05D006848 6.4e-142 507.7 314 79.6
Cfa015273 Carpinus fangiana HOM05D005513 ORTHO05D006848 8.4e-142 507.3 314 80.3
Duzib151G0764 Durio zibethinus HOM05D005513 ORTHO05D006848 1.9e-141 506.1 314 79.6
TWI38G0850 Tripterygium wilfordii HOM05D005513 ORTHO05D006848 2.4e-141 505.8 319 78.7
Cpa.g.sc343.3 Carica papaya HOM05D005513 ORTHO05D006848 9.3e-141 503.8 314 79.3
TAR362G0948 Trochodendron aralioides HOM05D005513 ORTHO05D006848 1.2e-140 503.4 313 78.9
CANSAT56G3287 Cannabis sativa HOM05D005513 ORTHO05D006848 4.6e-140 501.5 315 78.1
Manes.05G132000 Manihot esculenta HOM05D005513 ORTHO05D006848 4.6e-140 501.5 314 78.3
Nn7g37504 Nelumbo nucifera HOM05D005513 ORTHO05D006848 6.0e-140 501.1 314 78.3
Thecc.04G162400 Theobroma cacao HOM05D005513 ORTHO05D006848 1.0e-139 500.4 314 79.9
Atru.chr4.1482 Acer truncatum HOM05D005513 ORTHO05D006848 3.9e-139 498.4 309 79.6
Actinidia11441 Actinidia chinensis HOM05D005513 ORTHO05D006848 5.6e-138 494.6 327 76.8
CiPaw.01G170000 Carya illinoinensis HOM05D005513 ORTHO05D006848 5.6e-138 494.6 314 78.0
CSS0036954 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 7.3e-138 494.2 315 77.1
Gohir.D10G121000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 7.3e-138 494.2 314 77.7
Gorai.011G132900 Gossypium raimondii HOM05D005513 ORTHO05D006848 7.3e-138 494.2 314 77.7
Prupe.7G267200 Prunus persica HOM05D005513 ORTHO05D006848 2.1e-137 492.7 314 77.4
Gohir.A10G146000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 3.6e-137 491.9 314 77.4
PGR042G2305 Punica granatum HOM05D005513 ORTHO05D006848 6.2e-137 491.1 316 76.3
QL10p057731 Quercus lobata HOM05D005513 ORTHO05D006848 8.1e-137 490.7 313 77.6
RcHm_v2.0_Chr2g0085091 Rosa chinensis HOM05D005513 ORTHO05D006848 1.1e-136 490.3 314 77.4
GSVIVG01038190001 Vitis vinifera HOM05D005513 ORTHO05D006848 2.4e-136 489.2 315 77.1
FAN26G1480 Fragaria x ananassa HOM05D005513 ORTHO05D006848 9.0e-136 487.3 314 76.8
FvH4_1g00490 Fragaria vesca HOM05D005513 ORTHO05D006848 1.5e-135 486.5 314 75.8
Potri.019G099100 Populus trichocarpa HOM05D005513 ORTHO05D006848 1.5e-135 486.5 300 79.3
Sabra19G0110200 Salix brachista HOM05D005513 ORTHO05D006848 2.6e-135 485.7 300 79.0
FAN23G0174 Fragaria x ananassa HOM05D005513 ORTHO05D006848 5.8e-135 484.6 314 76.4
PSO675G7310 Papaver somniferum HOM05D005513 ORTHO05D006848 9.9e-135 483.8 316 74.7
Atru.chr4.1511 Acer truncatum HOM05D005587 ORTHO05D007287 1.1e-133 480.3 300 79.3
Nitab4.5_0001936g0090 Nicotiana tabacum HOM05D005513 ORTHO05D006848 1.4e-133 479.9 301 77.4
Sed0010820 Sechium edule HOM05D005513 ORTHO05D006848 1.9e-133 479.6 300 77.0
vmacro15699 Vaccinium macrocarpon HOM05D005513 ORTHO05D006848 4.2e-133 478.4 326 73.0
Cc09_g04220 Coffea canephora HOM05D005513 ORTHO05D006848 7.1e-133 477.6 300 76.7
Sed0015185 Sechium edule HOM05D005513 ORTHO05D006848 7.1e-133 477.6 300 77.3
FAN28G1408 Fragaria x ananassa HOM05D005513 ORTHO05D006848 4.6e-132 474.9 334 71.3
HanXRQChr10g0285921 Helianthus annuus HOM05D005513 ORTHO05D006848 4.6e-132 474.9 298 76.8
COL.COLO4_08197 Corchorus olitorius HOM05D005513 ORTHO05D006848 6.0e-132 474.6 325 73.8
Oeu057533.3 Olea europaea HOM05D005513 ORTHO05D006848 6.0e-132 474.6 340 70.3
PSO541G5416 Papaver somniferum HOM05D005513 ORTHO05D006848 1.3e-131 473.4 316 73.7
AUR62002417 Chenopodium quinoa HOM05D005513 ORTHO05D006848 1.8e-131 473.0 306 74.5
Nitab4.5_0008882g0020 Nicotiana tabacum HOM05D005513 ORTHO05D006848 2.3e-131 472.6 301 75.7
SalBow3G2273 Salvia bowleyana HOM05D005513 ORTHO05D006848 3.0e-131 472.2 300 77.3
Aqoxy2G04162 Aquilegia oxysepala HOM05D005513 ORTHO05D006848 1.1e-130 470.3 303 75.2
MSTRG.8188 Avicennia marina HOM05D005513 ORTHO05D006848 1.5e-130 469.9 300 77.0
CAN.G575.118 Capsicum annuum HOM05D005513 ORTHO05D006848 1.9e-130 469.5 301 76.7
EL10Ac3g06111 Beta vulgaris HOM05D005513 ORTHO05D006848 2.5e-130 469.2 316 73.1
Migut.F01838 Erythranthe guttata HOM05D005513 ORTHO05D006848 2.5e-130 469.2 319 73.4
QL10p057421 Quercus lobata HOM05D005513 ORTHO05D006848 4.3e-130 468.4 371 66.0
CAN.G2177.12 Capsicum annuum HOM05D005513 ORTHO05D006848 5.6e-130 468.0 301 76.4
Eucgr.L00024 Eucalyptus grandis HOM05D005513 ORTHO05D006848 7.4e-130 467.6 316 73.1
AUR62023772 Chenopodium quinoa HOM05D005513 ORTHO05D006848 9.6e-130 467.2 306 74.2
Atru.BG.100.p Acer truncatum HOM05D005513 ORTHO05D006848 2.8e-129 465.7 283 80.6
CSS0028849 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 2.8e-129 465.7 282 81.2
CAN.G1579.15 Capsicum annuum HOM05D005513 ORTHO05D006848 3.7e-129 465.3 301 76.4
Peaxi162Scf00544g00118 Petunia axillaris HOM05D005513 ORTHO05D006848 3.7e-129 465.3 301 76.1
Lsat_1_v5_gn_2_40261 Lactuca sativa HOM05D005513 ORTHO05D006848 4.8e-129 464.9 322 72.0
PGSC0003DMG400004444 Solanum tuberosum HOM05D005513 ORTHO05D006848 6.2e-129 464.5 302 75.2
ATR0743G005 Amborella trichopoda HOM05D005513 ORTHO05D006848 1.8e-128 463.0 314 71.0
Hund12358 Selenicereus undatus HOM05D005513 ORTHO05D006848 1.8e-128 463.0 313 70.6
Sopen12g019010 Solanum pennellii HOM05D005513 ORTHO05D006848 5.3e-128 461.5 302 74.5
RhsimUnG0015400 Rhododendron simsii HOM05D005513 ORTHO05D006848 1.0e-126 457.2 349 67.9
Aa31LG3G16700 Aethionema arabicum HOM05D005513 ORTHO05D006848 1.7e-126 456.4 297 73.7
CsaV3_6G032350 Cucumis sativus L. HOM05D005513 ORTHO05D006848 2.5e-125 452.6 302 74.5
Peaxi162Scf00544g00117 Petunia axillaris HOM05D005513 ORTHO05D006848 2.1e-124 449.5 300 73.0
CAN.G575.103 Capsicum annuum HOM05D005513 ORTHO05D006848 3.5e-124 448.7 300 74.3
Thhalv10014198m.g Eutrema salsugineum HOM05D005513 ORTHO05D006848 7.9e-124 447.6 303 71.3
THA.LOC104801693 Tarenaya hassleriana HOM05D005513 ORTHO05D006848 7.9e-124 447.6 300 71.0
BcaB05g21485 Brassica carinata HOM05D005513 ORTHO05D006848 1.3e-123 446.8 304 71.4
C02p04480 Brassica napus HOM05D005513 ORTHO05D006848 1.3e-123 446.8 304 71.4
HPP92_011686 Vanilla planifolia HOM05D005513 ORTHO05D006848 1.3e-123 446.8 300 70.7
HPP92_011691 Vanilla planifolia HOM05D005513 ORTHO05D006848 3.0e-123 445.7 300 70.7
BraA02t05034Z Brassica rapa HOM05D005513 ORTHO05D006848 5.1e-123 444.9 304 70.7
Eucgr.G01603 Eucalyptus grandis HOM05D005513 ORTHO05D006848 5.1e-123 444.9 316 70.9
Rhsim02G0085900 Rhododendron simsii HOM05D005513 ORTHO05D006848 5.1e-123 444.9 367 64.6
Os08g0542600 Oryza sativa ssp. japonica HOM05D005513 ORTHO05D006848 6.7e-123 444.5 300 70.7
A02p00500 Brassica napus HOM05D005513 ORTHO05D006848 8.7e-123 444.1 304 71.1
BolC2t06408H Brassica oleracea HOM05D005513 ORTHO05D006848 1.9e-122 443.0 304 70.7
AL6G20970 Arabidopsis lyrata HOM05D005513 ORTHO05D006848 4.3e-122 441.8 297 71.4
MD15G1148400 Malus domestica HOM05D005513 ORTHO05D006848 5.6e-122 441.4 282 76.6
Sp6g32980 Schrenkiella parvula HOM05D005513 ORTHO05D006848 5.6e-122 441.4 303 69.6
CARHR202830 Cardamine hirsuta HOM05D005513 ORTHO05D006848 3.7e-121 438.7 298 71.5
Zm00001eb037350 Zea mays HOM05D005513 ORTHO05D006848 8.2e-121 437.6 300 70.0
AT5G10460 Arabidopsis thaliana HOM05D005513 ORTHO05D006848 3.1e-120 435.6 297 70.4
Carub.0006s0894 Capsella rubella HOM05D005513 ORTHO05D006848 3.1e-120 435.6 298 70.1
CAN.G2107.3 Capsicum annuum HOM05D005513 ORTHO05D006848 3.1e-120 435.6 298 74.5
ECA238G0802 Erigeron canadensis HOM05D005513 ORTHO05D006848 3.1e-120 435.6 292 73.3
Lj6A199G41 Lonicera japonica HOM05D005513 ORTHO05D006848 4.0e-120 435.3 286 76.2
BcaC03g13313 Brassica carinata HOM05D005513 ORTHO05D006848 1.9e-117 426.4 304 69.1
MELO3C011447.2 Cucumis melo HOM05D005513 ORTHO05D006848 1.0e-115 420.6 345 63.2
SEGI_26385 Sequoiadendron giganteum HOM05D005513 ORTHO05D006848 5.1e-115 418.3 301 64.5
Dinv33223 Davidia involucrata HOM05D005513 ORTHO05D006848 4.1e-112 408.7 250 81.2
ClCG08G010170 Citrullus lanatus HOM05D005513 ORTHO05D006848 1.9e-109 399.8 302 67.2
Sc19g0006410 Simmondsia chinensis HOM05D005513 ORTHO05D006848 2.5e-109 399.4 250 78.8
SGA_v2.0_scaffold122G33215 Striga asiatica HOM05D005513 ORTHO05D006848 3.0e-107 392.5 280 71.1
Solyc12g038820.1 Solanum lycopersicum HOM05D005513 ORTHO05D006848 1.8e-104 383.3 251 74.9
Nitab4.5_0002604g0050 Nicotiana tabacum HOM05D005513 ORTHO05D006848 5.3e-104 381.7 292 67.8
CAN.G2075.11 Capsicum annuum HOM05D005513 ORTHO05D006848 4.5e-103 378.6 300 65.0
CAN.G575.78 Capsicum annuum HOM05D005513 ORTHO05D006848 5.9e-103 378.3 250 74.4
SMO119G0305 Selaginella moellendorffii HOM05D005513 ORTHO05D006848 7.2e-101 371.3 300 58.3
Nitab4.5_0000241g0250 Nicotiana tabacum HOM05D005513 ORTHO05D006848 2.2e-97 359.8 259 70.3
Haze_01354 Corylus avellana HOM05D005513 ORTHO05D006848 3.8e-94 349.0 315 61.0
Medtr4g087600 Medicago truncatula HOM05D005513 ORTHO05D006848 3.3e-90 335.9 208 79.8
DCAR_005450 Daucus carota HOM05D005513 ORTHO05D006848 1.2e-87 327.4 227 71.8
CAN.G2075.13 Capsicum annuum HOM05D005513 ORTHO05D006848 2.6e-82 309.7 235 68.9
Lj6A58T47 Lonicera japonica HOM05D005513 ORTHO05D006848 9.7e-82 307.8 203 76.4
MCO04G248 Micromonas commoda HOM05D005513 ORTHO05D006848 8.8e-75 284.6 331 46.5
AUR62021707 Chenopodium quinoa HOM05D005513 ORTHO05D006848 1.3e-73 280.8 186 74.7
CAN.G181.20 Capsicum annuum HOM05D005513 ORTHO05D006848 1.8e-72 276.9 190 73.2
PRCOL_00005454 Prasinoderma coloniale HOM05D005513 ORTHO05D006848 7.5e-58 228.4 314 42.0
Lj6A193T36 Lonicera japonica HOM05D005513 ORTHO05D006848 5.0e-54 215.7 174 68.4
Gorai.004G148900 Gossypium raimondii HOM05D005513 ORTHO05D006848 1.5e-53 214.2 164 68.3
Cre14.g609300 Chlamydomonas reinhardtii HOM05D005513 ORTHO05D006848 1.1e-51 208.0 318 38.4
SHI25989 Sapria himalayana HOM05D000105 ORTHO05D000023 3.4e-50 203.0 170 61.8
CAN.G1565.3 Capsicum annuum HOM05D005513 ORTHO05D006848 8.3e-49 198.4 137 73.7
CAN.G1703.16 Capsicum annuum HOM05D005513 ORTHO05D006848 2.4e-48 196.8 142 70.4
Lj6A58T48 Lonicera japonica HOM05D005513 ORTHO05D006848 4.4e-42 176.0 136 66.9
Cc00_g04390 Coffea canephora HOM05D005513 ORTHO05D006848 4.6e-39 166.0 109 70.6
Lj6A203T27 Lonicera japonica HOM05D005513 ORTHO05D006848 2.8e-36 156.8 100 78.0
CAN.G1703.15 Capsicum annuum HOM05D005513 ORTHO05D006848 5.4e-32 142.5 91 78.0
CAN.G12630.1 Capsicum annuum HOM05D005513 ORTHO05D006848 3.4e-26 123.2 79 75.9
Lj6A203G20 Lonicera japonica HOM05D005513 ORTHO05D006848 2.2e-25 120.6 175 43.4
RcHm_v2.0_Chr2g0085051 Rosa chinensis HOM05D005513 ORTHO05D343180 3.5e-23 113.2 85 69.4
Lj6C203G2 Lonicera japonica HOM05D005513 ORTHO05D006848 1.7e-22 110.9 77 72.7
EL10Ac7g16782 Beta vulgaris HOM05D005513 ORTHO05D006848 4.3e-21 106.3 64 81.2
Lj6A192T18 Lonicera japonica HOM05D005513 ORTHO05D006848 5.6e-13 79.3 55 72.7
SHI25988 Sapria himalayana HOM05D000105 ORTHO05D000023 1.1e-11 75.1 87 46.0
Lj6A230T44 Lonicera japonica HOM05D005513 ORTHO05D006848 4.0e-11 73.2 53 69.8
SHI25987 Sapria himalayana HOM05D005513 ORTHO05D006848 4.9e-09 66.2 40 72.5


User provided reference genes

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