Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G059300 Phaseolus vulgaris HOM05D013640 ORTHO05D014229 5.7e-257 890.6 500 100.0
VMungo0251G2386 Vigna mungo HOM05D013640 ORTHO05D014229 1.6e-62 244.6 500 40.0
Phvul.003G059200 Phaseolus vulgaris HOM05D013640 ORTHO05D014229 2.3e-48 197.6 431 33.6
VMungo0251G1126 Vigna mungo HOM05D013640 ORTHO05D014229 2.2e-43 181.0 422 32.0
Glyma.02G139200 Glycine max HOM05D013640 ORTHO05D014229 3.7e-38 163.7 163 47.9
Glyma.17G171600 Glycine max HOM05D013640 ORTHO05D014229 1.4e-37 161.8 188 44.7
Glyma.02G139432 Glycine max HOM05D013640 ORTHO05D014229 1.9e-34 151.4 301 40.2
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 1.2e-33 148.7 155 49.0
Glyma.02G139300 Glycine max HOM05D013640 ORTHO05D014229 1.6e-33 148.3 315 39.7
Glyma.07G206066 Glycine max HOM05D013640 ORTHO05D014229 1.8e-32 144.8 154 48.1
Phvul.004G160600 Phaseolus vulgaris HOM05D002984 ORTHO05D014229 2.3e-32 144.4 164 47.6
Glyma.02G139366 Glycine max HOM05D013640 ORTHO05D014229 6.7e-32 142.9 208 39.9
Glyma.20G031800 Glycine max HOM05D002984 ORTHO05D014229 1.8e-29 134.8 192 40.1
VMungo0464G0094 Vigna mungo HOM05D002984 ORTHO05D014229 1.0e-24 119.0 142 40.1
Psat1g039440 Pisum sativum HOM05D002984 ORTHO05D022868 5.1e-24 116.7 196 35.7
Phvul.004G160500 Phaseolus vulgaris HOM05D002984 ORTHO05D003561 4.1e-21 107.1 118 42.4
arahy.Tifrunner.gnm1.ann1.53ZNG0 Arachis hypogaea HOM05D002984 ORTHO05D003561 9.0e-21 105.9 122 44.3
Medtr6g085080 Medicago truncatula HOM05D002984 ORTHO05D022868 4.5e-20 103.6 189 33.9
Lalb_Chr14g0371321 Lupinus albus HOM05D002984 ORTHO05D003561 7.7e-20 102.8 156 37.8
Medtr6g085130 Medicago truncatula HOM05D002984 ORTHO05D022868 2.9e-19 100.9 190 32.1
arahy.Tifrunner.gnm1.ann1.48S2GI Arachis hypogaea HOM05D002984 ORTHO05D003561 8.5e-19 99.4 122 41.0
Medtr6g085100 Medicago truncatula HOM05D002984 ORTHO05D022868 2.5e-18 97.8 152 34.9
Lj2g0016414 Lotus japonicus HOM05D002984 ORTHO05D022868 7.9e-17 92.8 513 26.1
FvH4_5g01900 Fragaria vesca HOM05D002984 ORTHO05D003561 4.7e-09 67.0 196 28.1
Migut.E00313 Erythranthe guttata HOM05D002984 ORTHO05D003561 1.4e-08 65.5 125 28.8
Mapoly0022s0114 Marchantia polymorpha HOM05D002984 ORTHO05D003561 1.4e-08 65.5 132 32.6
SGA_v2.0_scaffold124G33581 Striga asiatica HOM05D002984 ORTHO05D003561 1.4e-08 65.5 125 29.6
PSO017G3087 Papaver somniferum HOM05D002984 ORTHO05D003561 2.3e-08 64.7 170 27.6
CSS0024955 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 3.0e-08 64.3 126 30.2
Gohir.A03G097900 Gossypium hirsutum HOM05D002984 ORTHO05D003561 5.1e-08 63.5 125 28.8
Gohir.D02G115800 Gossypium hirsutum HOM05D002984 ORTHO05D003561 5.1e-08 63.5 125 28.8
Gorai.005G138200 Gossypium raimondii HOM05D002984 ORTHO05D003561 5.1e-08 63.5 125 28.8
Lalb_Chr11g0074751 Lupinus albus HOM05D013640 ORTHO05D014229 5.1e-08 63.5 62 45.2
Medtr5g054690 Medicago truncatula HOM05D002984 ORTHO05D003561 5.1e-08 63.5 139 28.8
PSO017G4771 Papaver somniferum HOM05D002984 ORTHO05D003561 5.1e-08 63.5 130 30.0
PSO478G2088 Papaver somniferum HOM05D002984 ORTHO05D003561 5.1e-08 63.5 130 30.0
Atru.chr11.1338 Acer truncatum HOM05D002984 ORTHO05D003561 6.7e-08 63.2 125 27.2
CiPaw.16G003700 Carya illinoinensis HOM05D002984 ORTHO05D003561 6.7e-08 63.2 125 28.0
Ca_19808_v3 Cicer arietinum L. HOM05D002984 ORTHO05D003561 8.8e-08 62.8 181 26.0
Hma1.2p1_0030F.1_g018360 Hydrangea macrophylla HOM05D002984 ORTHO05D003561 8.8e-08 62.8 125 28.8
SMO118G0238 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 8.8e-08 62.8 137 27.7
MD16G1047200 Malus domestica HOM05D002984 ORTHO05D003561 1.1e-07 62.4 125 28.0
Nn4g23754 Nelumbo nucifera HOM05D002984 ORTHO05D003561 1.1e-07 62.4 130 28.5
Thecc.02G359700 Theobroma cacao HOM05D002984 ORTHO05D003561 1.1e-07 62.4 176 27.8
GSVIVG01011939001 Vitis vinifera HOM05D002984 ORTHO05D003561 1.1e-07 62.4 171 26.9
Actinidia14860 Actinidia chinensis HOM05D002984 ORTHO05D003561 1.5e-07 62.0 171 28.1
Aqoxy3G00352 Aquilegia oxysepala HOM05D002984 ORTHO05D003561 1.5e-07 62.0 130 27.7
CANSAT64G2157 Cannabis sativa HOM05D002984 ORTHO05D003561 1.5e-07 62.0 154 26.6
Duzib251G0734 Durio zibethinus HOM05D002984 ORTHO05D003561 1.5e-07 62.0 168 25.6
Os09g0306700 Oryza sativa ssp. japonica HOM05D002984 ORTHO05D003561 1.5e-07 62.0 125 29.6
Potri.008G117700 Populus trichocarpa HOM05D002984 ORTHO05D003561 1.5e-07 62.0 130 27.7
Atru.chr11.1335 Acer truncatum HOM05D002984 ORTHO05D003561 2.0e-07 61.6 125 28.0
PGR142G0084 Punica granatum HOM05D002984 ORTHO05D003561 2.0e-07 61.6 125 27.2
RcHm_v2.0_Chr4g0435671 Rosa chinensis HOM05D002984 ORTHO05D003561 2.0e-07 61.6 125 28.8
Sabra10G0097800 Salix brachista HOM05D002984 ORTHO05D003561 2.0e-07 61.6 130 26.9
CiPaw.16G003900 Carya illinoinensis HOM05D002984 ORTHO05D003561 2.6e-07 61.2 125 28.0
Potri.010G128600 Populus trichocarpa HOM05D002984 ORTHO05D003561 2.6e-07 61.2 130 27.7
TPR.G38317 Trifolium pratense HOM05D002984 ORTHO05D003561 2.6e-07 61.2 182 25.3
EL10Ac3g05929 Beta vulgaris HOM05D002984 ORTHO05D003561 3.3e-07 60.8 170 27.6
CAN.G2.31 Capsicum annuum HOM05D002984 ORTHO05D003561 3.3e-07 60.8 197 24.9
FvH4_4g27961 Fragaria vesca HOM05D002984 ORTHO05D003561 3.3e-07 60.8 173 24.9
FAN22G1846 Fragaria x ananassa HOM05D002984 ORTHO05D003561 3.3e-07 60.8 168 25.6
Medtr1g013000 Medicago truncatula HOM05D002984 ORTHO05D003561 3.3e-07 60.8 167 25.7
CSS0023076 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 4.4e-07 60.5 125 28.0
Cpa.g.sc1.211 Carica papaya HOM05D002984 ORTHO05D003561 4.4e-07 60.5 125 28.0
Ciclev10030710m.g Citrus clementina HOM05D002984 ORTHO05D003561 4.4e-07 60.5 125 28.0
Cc11_g10490 Coffea canephora HOM05D002984 ORTHO05D003561 4.4e-07 60.5 125 28.0
HanXRQChr16g0529571 Helianthus annuus HOM05D002984 ORTHO05D003561 4.4e-07 60.5 125 28.0
Manes.14G098600 Manihot esculenta HOM05D002984 ORTHO05D003561 4.4e-07 60.5 125 28.0
Oeu010774.1 Olea europaea HOM05D002984 ORTHO05D003561 4.4e-07 60.5 125 28.0
QL01p044747 Quercus lobata HOM05D002984 ORTHO05D003561 4.4e-07 60.5 125 28.0
FvH4_6g01630 Fragaria vesca HOM05D002984 ORTHO05D003561 5.7e-07 60.1 128 28.9
PGR142G1725 Punica granatum HOM05D002984 ORTHO05D003561 5.7e-07 60.1 125 28.0
Solyc12g070100.2 Solanum lycopersicum HOM05D002984 ORTHO05D003561 7.4e-07 59.7 170 25.3
Sopen12g027160 Solanum pennellii HOM05D002984 ORTHO05D003561 7.4e-07 59.7 170 25.3
VMungo0464G1061 Vigna mungo HOM05D002984 ORTHO05D003561 7.4e-07 59.7 174 29.3
BcaC01g01711 Brassica carinata HOM05D002984 ORTHO05D003561 9.7e-07 59.3 130 26.9
A08p27060 Brassica napus HOM05D002984 ORTHO05D003561 9.7e-07 59.3 130 26.9
C03p72840 Brassica napus HOM05D002984 ORTHO05D003561 9.7e-07 59.3 130 26.9
Glyma.01G086201 Glycine max HOM05D002984 ORTHO05D003561 9.7e-07 59.3 182 26.9
THA.LOC104808226 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 9.7e-07 59.3 125 26.4
arahy.Tifrunner.gnm1.ann1.IQF6NS Arachis hypogaea HOM05D002984 ORTHO05D003561 1.3e-06 58.9 169 25.4
arahy.Tifrunner.gnm1.ann1.X8TPQJ Arachis hypogaea HOM05D002984 ORTHO05D003561 1.3e-06 58.9 169 25.4
ECA234G4415 Erigeron canadensis HOM05D002984 ORTHO05D003561 1.3e-06 58.9 125 27.2
Glyma.02G098300 Glycine max HOM05D002984 ORTHO05D003561 1.3e-06 58.9 125 27.2
Lsat_1_v5_gn_4_19001 Lactuca sativa HOM05D002984 ORTHO05D003561 1.3e-06 58.9 125 27.2
Prupe.1G306600 Prunus persica HOM05D002984 ORTHO05D003561 1.3e-06 58.9 193 24.9
BcaB03g12090 Brassica carinata HOM05D002984 ORTHO05D003561 1.7e-06 58.5 168 25.6
Sabra08G0089300 Salix brachista HOM05D002984 ORTHO05D003561 1.7e-06 58.5 122 27.0
Haze_17450 Corylus avellana HOM05D002984 ORTHO05D003561 2.2e-06 58.2 117 29.9
Medtr5g054680 Medicago truncatula HOM05D002984 ORTHO05D003561 2.2e-06 58.2 162 24.7
Phvul.003G028300 Phaseolus vulgaris HOM05D002984 ORTHO05D003561 2.2e-06 58.2 125 26.4
TWI79G1384 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 2.2e-06 58.2 125 26.4
HPP92_024319 Vanilla planifolia HOM05D002984 ORTHO05D003561 2.2e-06 58.2 179 26.3
Carub.0001s2494 Capsella rubella HOM05D002984 ORTHO05D003561 2.8e-06 57.8 125 27.2
Lalb_Chr17g0341951 Lupinus albus HOM05D002984 ORTHO05D003561 2.8e-06 57.8 125 27.2
SEGI_39328 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 2.8e-06 57.8 125 28.0
DCAR_026720 Daucus carota HOM05D002984 ORTHO05D003561 3.7e-06 57.4 163 27.6
Lj6A762T42 Lonicera japonica HOM05D002984 ORTHO05D003561 3.7e-06 57.4 160 26.2
Lj6C764G13 Lonicera japonica HOM05D002984 ORTHO05D003561 3.7e-06 57.4 160 26.2
TWI31G1103 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 3.7e-06 57.4 125 26.4
Zm00001eb097890 Zea mays HOM05D002984 ORTHO05D003561 3.7e-06 57.4 166 28.3
Aa31LG7G8960 Aethionema arabicum HOM05D002984 ORTHO05D003561 4.8e-06 57.0 139 26.6
MELO3C012221.2 Cucumis melo HOM05D002984 ORTHO05D003561 4.8e-06 57.0 155 26.5
CsaV3_5G034050 Cucumis sativus L. HOM05D002984 ORTHO05D003561 6.3e-06 56.6 125 27.2
Sed0009737 Sechium edule HOM05D002984 ORTHO05D003561 6.3e-06 56.6 125 27.2


User provided reference genes

Program Settings