Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 0.0e+00 1488.0 820 100.0
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 2.3e-295 1018.8 817 74.7
VMungo0251G2273 Vigna mungo HOM05D007489 ORTHO05D008037 5.3e-236 821.6 582 81.4
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 3.6e-216 755.7 846 56.9
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 2.7e-208 729.6 853 55.7
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 4.2e-193 679.1 846 52.8
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 1.4e-180 637.5 857 50.6
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 1.6e-176 624.0 851 50.4
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 2.1e-160 570.5 788 49.6
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 3.4e-126 456.8 577 50.6
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 2.4e-79 301.2 864 34.5
Glyma.13G171600 Glycine max HOM05D007489 ORTHO05D008037 5.4e-79 300.1 244 70.1
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 1.9e-76 291.6 854 32.4
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 1.4e-74 285.4 870 33.0
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 3.1e-66 257.7 833 32.4
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 8.9e-66 256.1 897 31.2
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 2.6e-65 254.6 858 31.5
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 5.8e-65 253.4 840 30.5
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 2.2e-64 251.5 844 31.5
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 3.7e-64 250.8 847 31.5
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 2.4e-63 248.1 856 31.1
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 5.4e-63 246.9 907 29.8
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 2.0e-62 245.0 869 29.5
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 3.0e-61 241.1 865 30.5
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 3.0e-61 241.1 867 30.6
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 3.9e-61 240.7 990 29.7
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 6.6e-61 240.0 853 30.0
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 1.1e-58 232.6 865 30.1
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 1.8e-58 231.9 875 30.4
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 1.8e-58 231.9 846 31.2
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 1.2e-57 229.2 851 31.6
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 1.3e-56 225.7 894 29.6
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 4.9e-56 223.8 814 29.1
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 2.4e-55 221.5 848 29.7
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 9.2e-55 219.5 867 30.0
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 2.3e-53 214.9 816 30.9
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 4.3e-52 210.7 159 75.5
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 9.5e-52 209.5 890 28.9
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 1.4e-50 205.7 832 29.8
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 2.3e-50 204.9 870 28.4
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 2.0e-49 201.8 852 29.0
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 1.7e-48 198.7 831 29.2
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 1.6e-46 192.2 870 29.4
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 4.6e-46 190.7 842 29.2
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 5.1e-45 187.2 448 37.1
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 8.6e-45 186.4 788 28.2
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 1.6e-43 182.2 847 29.0
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 2.1e-43 181.8 966 27.1
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 3.6e-43 181.0 953 27.0
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 1.1e-39 169.5 839 27.7
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 7.1e-39 166.8 857 28.0
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 1.0e-37 162.9 347 37.5
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 3.9e-37 161.0 843 28.1
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 1.5e-36 159.1 841 28.5
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 5.3e-34 150.6 834 26.9
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 1.2e-33 149.4 861 27.5
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 2.6e-33 148.3 891 26.2
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 5.8e-33 147.1 270 42.2
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 7.1e-31 140.2 890 25.7
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 1.0e-29 136.3 834 24.8
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 1.7e-29 135.6 878 26.9
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 9.6e-28 129.8 873 27.5
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 2.1e-27 128.6 838 25.3
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 3.6e-27 127.9 264 37.1
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 6.2e-27 127.1 888 26.5
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 2.4e-26 125.2 887 25.5
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 4.0e-26 124.4 839 26.9
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 5.3e-26 124.0 853 26.0
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 1.5e-25 122.5 911 24.0
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 1.5e-25 122.5 226 37.2
Hund23951 Selenicereus undatus HOM05D007489 ORTHO05D008037 4.5e-25 120.9 183 42.6
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 3.8e-24 117.9 763 25.0
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 1.6e-22 112.5 932 24.4
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 6.0e-22 110.5 878 24.4
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 1.8e-21 109.0 162 45.1
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.8e-21 109.0 890 24.7
MBI06_g31401_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 3.9e-21 107.8 107 51.4
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 3.3e-20 104.8 884 23.5
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 2.8e-19 101.7 853 24.6
Cpa.g.sc7.37 Carica papaya HOM05D007489 ORTHO05D008037 2.8e-19 101.7 478 27.4
DCAR_007972 Daucus carota HOM05D007489 ORTHO05D008037 2.8e-19 101.7 103 49.5
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 3.7e-19 101.3 898 23.5
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 3.7e-19 101.3 886 23.9
SEGI_30603 Sequoiadendron giganteum HOM05D007489 ORTHO05D008037 4.8e-19 100.9 149 40.9
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 2.4e-18 98.6 837 23.5
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 3.1e-18 98.2 115 53.0
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 6.9e-18 97.1 377 30.2
Peaxi162Scf00223g01422 Petunia axillaris HOM05D007489 ORTHO05D008037 6.9e-18 97.1 90 55.6
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 9.0e-18 96.7 866 24.5
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 1.2e-17 96.3 847 24.9
Lalb_Chr16g0384221 Lupinus albus HOM05D007489 ORTHO05D008037 1.5e-17 95.9 108 54.6
Nitab4.5_0000376g0220 Nicotiana tabacum HOM05D007489 ORTHO05D008037 1.0e-16 93.2 490 25.9
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 2.9e-16 91.7 844 24.4
unitig_0.g132 Utricularia gibba HOM05D007489 ORTHO05D008037 2.9e-16 91.7 258 29.1
Aqoxy534s001 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 3.8e-16 91.3 104 45.2
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 3.8e-16 91.3 841 24.5
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 2.5e-15 88.6 473 27.5
PSO782G2467 Papaver somniferum HOM05D007489 ORTHO05D008037 5.5e-15 87.4 186 37.6
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 5.5e-15 87.4 140 40.7
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 6.7e-13 80.5 65 67.7
ATR0602G208 Amborella trichopoda HOM05D007489 ORTHO05D008037 1.9e-12 79.0 790 22.9
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 1.3e-11 76.3 222 32.0
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 2.4e-10 72.0 126 38.9
BolC1t01218H Brassica oleracea HOM05D010718 ORTHO05D008037 1.2e-09 69.7 862 22.4
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.2e-09 69.7 67 52.2
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.3e-08 66.2 67 50.7
MD05G1304800 Malus domestica HOM05D007489 ORTHO05D008037 2.2e-08 65.5 482 23.9
SMO340G0226 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 8.4e-08 63.5 55 54.5
SMO356G0683 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 1.1e-07 63.2 55 54.5


User provided reference genes

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