Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 5.9e-283 976.9 488 100.0
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 3.7e-253 877.9 490 91.2
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 2.9e-237 825.1 500 82.0
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 8.3e-237 823.5 500 84.6
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 8.7e-202 707.2 494 72.1
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 7.1e-196 687.6 503 71.8
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 1.5e-193 679.9 488 68.9
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 2.2e-189 666.0 495 70.5
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 1.9e-188 662.9 495 69.3
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 2.1e-187 659.4 499 69.9
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 7.4e-169 597.8 495 61.0
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 2.4e-167 592.8 494 60.7
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 6.5e-165 584.7 477 59.5
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 1.9e-164 583.2 474 61.4
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.6e-163 580.1 499 59.5
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 4.3e-161 572.0 495 60.4
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.7e-160 570.1 510 60.8
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 1.7e-160 570.1 498 60.6
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 2.8e-160 569.3 458 60.3
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 2.8e-160 569.3 473 59.8
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 5.3e-159 565.1 431 64.3
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 9.1e-159 564.3 470 59.4
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.7e-157 560.1 483 58.6
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 1.7e-157 560.1 431 63.1
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 1.6e-155 553.5 494 59.1
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 4.7e-155 552.0 474 57.0
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 1.8e-154 550.1 430 61.4
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 2.0e-153 546.6 463 58.1
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 2.0e-153 546.6 496 57.7
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 2.6e-153 546.2 478 57.7
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 9.7e-153 544.3 491 56.4
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 2.2e-152 543.1 387 65.6
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 1.4e-151 540.4 485 58.6
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 4.1e-151 538.9 497 55.5
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.3e-151 538.5 497 55.3
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.6e-150 537.0 489 56.6
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 3.5e-150 535.8 485 55.9
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 3.5e-150 535.8 485 55.9
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 1.3e-149 533.9 475 55.8
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 3.8e-149 532.3 480 57.1
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 5.0e-149 531.9 432 60.2
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 5.0e-149 531.9 439 59.5
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.5e-148 530.4 431 59.6
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 2.5e-148 529.6 430 61.4
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.2e-147 527.3 395 63.8
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.4e-146 523.9 447 57.0
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.8e-146 523.5 481 55.5
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 6.7e-146 521.5 499 52.9
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.1e-145 520.8 363 67.2
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 2.0e-145 520.0 448 56.9
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 5.7e-145 518.5 372 64.0
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 7.5e-145 518.1 431 59.6
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 4.1e-143 512.3 451 57.4
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 3.5e-142 509.2 453 56.7
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 1.3e-141 507.3 428 57.7
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 1.3e-141 507.3 453 56.5
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 5.0e-141 505.4 501 53.3
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.9e-140 503.4 492 52.8
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 5.2e-138 495.4 479 54.3
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 8.8e-138 494.6 470 54.9
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 1.5e-137 493.8 385 61.3
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 2.0e-137 493.4 462 54.3
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 2.0e-137 493.4 459 54.9
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 3.4e-137 492.7 439 56.3
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 5.7e-137 491.9 487 50.5
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 9.8e-137 491.1 447 56.4
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 2.2e-136 490.0 386 60.9
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 2.8e-136 489.6 388 60.8
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.8e-136 489.6 484 53.3
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 6.3e-136 488.4 447 56.2
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 2.4e-135 486.5 485 51.8
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 3.1e-135 486.1 480 50.2
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 5.4e-135 485.3 396 59.8
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 7.0e-135 485.0 385 61.0
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 1.6e-134 483.8 484 52.7
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 3.5e-134 482.6 389 61.2
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.0e-133 481.1 472 52.5
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.7e-133 480.3 484 52.5
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 1.1e-132 477.6 381 60.4
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 1.5e-132 477.2 396 58.8
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 1.5e-132 477.2 396 58.8
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 1.5e-132 477.2 396 58.8
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 1.9e-132 476.9 375 59.7
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 7.2e-132 474.9 488 51.0
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 9.5e-132 474.6 387 59.7
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 1.6e-131 473.8 390 57.9
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 4.7e-131 472.2 387 57.6
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 1.5e-129 467.2 378 60.8
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 1.5e-129 467.2 386 59.8
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 2.6e-129 466.5 511 50.7
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 7.5e-129 464.9 386 59.6
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 7.5e-129 464.9 501 51.9
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 2.2e-128 463.4 434 55.3
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.3e-125 454.1 374 60.4
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 2.5e-124 449.9 463 49.2
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 1.0e-122 444.5 370 58.9
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.3e-117 427.6 445 49.2
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.9e-116 423.7 383 53.0
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.9e-100 370.5 430 44.9
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 4.6e-94 349.4 323 55.7
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.5e-92 343.6 483 41.6
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 1.2e-78 298.1 359 45.1
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 1.6e-78 297.7 329 51.1
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 3.3e-76 290.0 294 50.3
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 1.3e-75 288.1 393 44.3
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 4.8e-75 286.2 207 62.8
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 1.3e-69 268.1 394 39.8
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 7.4e-68 262.3 462 35.3
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 8.5e-56 222.2 310 40.3
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 1.5e-52 211.5 401 35.4
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 1.3e-35 155.2 180 50.0
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 6.3e-35 152.9 227 41.0
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 8.5e-32 142.5 112 62.5
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 4.4e-28 130.2 377 30.0
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.8e-26 124.8 129 51.9
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 7.7e-25 119.4 372 28.8
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 2.2e-24 117.9 383 27.9
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.3e-21 107.8 410 28.8
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 6.8e-21 106.3 334 31.4
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 8.8e-21 105.9 53 84.9
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 8.3e-19 99.4 227 34.8
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 3.3e-07 60.8 38 63.2


User provided reference genes

Program Settings