Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G045400 Phaseolus vulgaris HOM05D004696 ORTHO05D005645 7.9e-109 397.1 200 100.0
VMungo0331G1167 Vigna mungo HOM05D004696 ORTHO05D005645 2.0e-96 355.9 200 90.0
Glyma.01G218300 Glycine max HOM05D004696 ORTHO05D005645 2.6e-96 355.5 200 90.0
Glyma.11G024900 Glycine max HOM05D004696 ORTHO05D005645 2.6e-96 355.5 200 91.0
Phvul.010G140500 Phaseolus vulgaris HOM05D004696 ORTHO05D005645 9.3e-94 347.1 200 87.5
Lalb_Chr17g0338851 Lupinus albus HOM05D004696 ORTHO05D005645 1.9e-91 339.3 200 82.0
Glyma.14G125600 Glycine max HOM05D004696 ORTHO05D005645 9.7e-91 337.0 191 88.5
Lalb_Chr10g0096421 Lupinus albus HOM05D004696 ORTHO05D005645 1.0e-87 327.0 200 80.0
Lj2g0021207 Lotus japonicus HOM05D004696 ORTHO05D005645 2.5e-86 322.4 197 80.7
Lj4g0004970 Lotus japonicus HOM05D004696 ORTHO05D005645 7.9e-85 317.4 197 79.7
Psat7g133720 Pisum sativum HOM05D004696 ORTHO05D005645 1.1e-81 307.0 201 76.1
arahy.Tifrunner.gnm1.ann1.61U0KE Arachis hypogaea HOM05D004696 ORTHO05D005645 3.8e-79 298.5 209 72.7
Medtr5g081850 Medicago truncatula HOM05D004696 ORTHO05D005645 3.8e-79 298.5 201 74.6
Psat1g042400 Pisum sativum HOM05D004696 ORTHO05D005645 1.1e-78 297.0 201 74.1
arahy.Tifrunner.gnm1.ann1.NQRV37 Arachis hypogaea HOM05D004696 ORTHO05D005645 5.5e-78 294.7 209 72.2
arahy.Tifrunner.gnm1.ann1.BY2PXQ Arachis hypogaea HOM05D004696 ORTHO05D005645 1.2e-77 293.5 209 71.8
CiPaw.02G069300 Carya illinoinensis HOM05D004696 ORTHO05D005645 5.1e-76 288.1 197 73.6
CsaV3_6G008150 Cucumis sativus L. HOM05D004696 ORTHO05D005645 5.1e-76 288.1 200 73.0
Dinv29511 Davidia involucrata HOM05D004696 ORTHO05D005645 2.8e-74 282.3 197 73.6
Sed0019137 Sechium edule HOM05D004696 ORTHO05D005645 8.2e-74 280.8 200 71.0
CSS0007787 Camellia sinensis var. sinensis HOM05D004696 ORTHO05D005645 1.4e-73 280.0 198 71.7
Manes.11G020900 Manihot esculenta HOM05D004696 ORTHO05D005645 1.4e-73 280.0 197 72.1
Cpa.g.sc146.25 Carica papaya HOM05D004696 ORTHO05D005645 4.1e-73 278.5 198 72.7
Manes.03G211700 Manihot esculenta HOM05D004696 ORTHO05D005645 6.9e-73 277.7 198 72.2
TPR.G8061 Trifolium pratense HOM05D004696 ORTHO05D005645 1.5e-72 276.6 202 68.3
Dinv18020 Davidia involucrata HOM05D004696 ORTHO05D005645 3.4e-72 275.4 197 72.6
Ciclev10005920m.g Citrus clementina HOM05D004696 ORTHO05D005645 4.5e-72 275.0 197 70.1
Haze_00771 Corylus avellana HOM05D004696 ORTHO05D005645 4.5e-72 275.0 197 70.1
Prupe.1G105700 Prunus persica HOM05D004696 ORTHO05D005645 4.5e-72 275.0 200 70.0
Cfa015727 Carpinus fangiana HOM05D004696 ORTHO05D005645 7.7e-72 274.2 197 70.1
QL06p014174 Quercus lobata HOM05D004696 ORTHO05D005645 1.3e-71 273.5 207 68.1
Eucgr.B03956 Eucalyptus grandis HOM05D004696 ORTHO05D005645 3.8e-71 271.9 197 70.6
Atru.chr4.3144 Acer truncatum HOM05D004696 ORTHO05D005645 3.2e-70 268.9 199 70.9
TAR629G2307 Trochodendron aralioides HOM05D004696 ORTHO05D005645 9.4e-70 267.3 197 71.6
PGR031G3538 Punica granatum HOM05D004696 ORTHO05D005645 2.1e-69 266.2 200 68.5
MD07G1065600 Malus domestica HOM05D004696 ORTHO05D005645 6.1e-69 264.6 198 67.7
Thecc.04G312600 Theobroma cacao HOM05D004696 ORTHO05D005645 6.1e-69 264.6 198 67.7
GSVIVG01017685001 Vitis vinifera HOM05D004696 ORTHO05D005645 1.0e-68 263.8 197 68.0
Duzib151G0078 Durio zibethinus HOM05D004696 ORTHO05D005645 1.4e-68 263.5 198 67.7
Sabra02G0114900 Salix brachista HOM05D004696 ORTHO05D005645 1.4e-68 263.5 191 70.7
MD13G1140700 Malus domestica HOM05D004696 ORTHO05D005645 1.8e-68 263.1 198 67.2
Potri.008G206400 Populus trichocarpa HOM05D004696 ORTHO05D005645 2.3e-68 262.7 191 70.7
MD16G1136700 Malus domestica HOM05D004696 ORTHO05D005645 3.0e-68 262.3 197 68.0
Potri.010G002100 Populus trichocarpa HOM05D004696 ORTHO05D005645 3.0e-68 262.3 192 69.3
Lsat_1_v5_gn_1_39920 Lactuca sativa HOM05D004696 ORTHO05D005645 3.9e-68 261.9 197 66.0
CANSAT78G0332 Cannabis sativa HOM05D004696 ORTHO05D005645 5.2e-68 261.5 198 67.2
Sc17g0002920 Simmondsia chinensis HOM05D004696 ORTHO05D005645 5.2e-68 261.5 201 65.2
TWI09G0971 Tripterygium wilfordii HOM05D004696 ORTHO05D005645 8.8e-68 260.8 199 67.8
TWI73G0566 Tripterygium wilfordii HOM05D004696 ORTHO05D005645 1.1e-67 260.4 199 67.3
HanXRQChr09g0238571 Helianthus annuus HOM05D004696 ORTHO05D005645 2.0e-67 259.6 197 66.5
Gorai.005G071900 Gossypium raimondii HOM05D004696 ORTHO05D005645 2.6e-67 259.2 202 65.3
Actinidia22921 Actinidia chinensis HOM05D004696 ORTHO05D005645 9.7e-67 257.3 195 66.7
Gohir.A02G058200 Gossypium hirsutum HOM05D004696 ORTHO05D005645 1.3e-66 256.9 202 65.3
vmacro08011 Vaccinium macrocarpon HOM05D004696 ORTHO05D005645 1.7e-66 256.5 208 63.9
Aqoxy5G04183 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 2.2e-66 256.1 197 66.5
Aqoxy4G02417 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 2.8e-66 255.8 197 66.0
CAN.G305.38 Capsicum annuum HOM05D004696 ORTHO05D005645 4.8e-66 255.0 197 65.0
Ah.06g192450 Amaranthus hybridus HOM05D004696 ORTHO05D005645 6.3e-66 254.6 197 62.9
Gohir.D02G064000 Gossypium hirsutum HOM05D004696 ORTHO05D005645 8.2e-66 254.2 202 64.4
RcHm_v2.0_Chr4g0427441 Rosa chinensis HOM05D004696 ORTHO05D005645 1.1e-65 253.8 198 67.7
Solyc05g053220.3 Solanum lycopersicum HOM05D004696 ORTHO05D005645 1.1e-65 253.8 197 64.0
Sopen05g031730 Solanum pennellii HOM05D004696 ORTHO05D005645 1.1e-65 253.8 197 64.0
EL10Ac4g08571 Beta vulgaris HOM05D004696 ORTHO05D005645 3.1e-65 252.3 191 66.0
FAN07G1680 Fragaria x ananassa HOM05D004696 ORTHO05D005645 3.1e-65 252.3 197 69.0
Sabra08G0150400 Salix brachista HOM05D004696 ORTHO05D005645 4.1e-65 251.9 211 64.0
PGSC0003DMG400027150 Solanum tuberosum HOM05D004696 ORTHO05D005645 4.1e-65 251.9 197 63.5
FvH4_4g21490 Fragaria vesca HOM05D004696 ORTHO05D005645 2.0e-64 249.6 197 68.5
FAN12G0616 Fragaria x ananassa HOM05D004696 ORTHO05D005645 2.0e-64 249.6 197 68.0
Lsat_1_v5_gn_6_92581 Lactuca sativa HOM05D004696 ORTHO05D005645 3.5e-64 248.8 197 62.9
Ah.16g105210 Amaranthus hybridus HOM05D004696 ORTHO05D005645 4.5e-64 248.4 197 60.9
ECA220G0002 Erigeron canadensis HOM05D004696 ORTHO05D005645 7.7e-64 247.7 185 66.5
Sabra02G0116500 Salix brachista HOM05D004696 ORTHO05D005645 7.7e-64 247.7 211 64.0
MSTRG.24614 Avicennia marina HOM05D004696 ORTHO05D005645 1.3e-63 246.9 189 67.2
Migut.N00002 Erythranthe guttata HOM05D004696 ORTHO05D005645 5.0e-63 245.0 196 64.3
CDE06G2579 Ceratophyllum demersum HOM05D005139 ORTHO05D006125 4.2e-62 241.9 196 62.2
arahy.Tifrunner.gnm1.ann1.09FGJA Arachis hypogaea HOM05D004696 ORTHO05D005645 5.5e-62 241.5 198 64.6
Cc00_g15640 Coffea canephora HOM05D004696 ORTHO05D005645 5.5e-62 241.5 213 60.1
Ca_05928_v3 Cicer arietinum L. HOM05D004696 ORTHO05D005645 2.1e-61 239.6 201 62.7
Cc03_g00150 Coffea canephora HOM05D004696 ORTHO05D005645 8.0e-61 237.7 211 57.3
AUR62020507 Chenopodium quinoa HOM05D004696 ORTHO05D005645 2.3e-60 236.1 188 62.2
MBI03_g01483_MAGBIO Magnolia biondii HOM05D004696 ORTHO05D005645 2.3e-60 236.1 186 66.1
unitig_8.g2889 Utricularia gibba HOM05D004696 ORTHO05D005645 2.3e-60 236.1 197 64.5
SGA_v2.0_scaffold49G18399 Striga asiatica HOM05D004696 ORTHO05D005645 3.0e-60 235.7 197 66.0
Ca_06214_v3 Cicer arietinum L. HOM05D004696 ORTHO05D005645 1.5e-59 233.4 198 61.6
SalBow2G0725 Salvia bowleyana HOM05D001196 ORTHO05D005911 3.7e-58 228.8 185 65.9
THA.LOC104827108 Tarenaya hassleriana HOM05D004696 ORTHO05D005645 8.2e-58 227.6 192 58.3
Zm00001eb189970 Zea mays HOM05D004696 ORTHO05D005645 1.6e-56 223.4 197 57.9
Oeu022705.1 Olea europaea HOM05D004696 ORTHO05D005645 3.5e-56 222.2 178 63.5
ClCG06G002080 Citrullus lanatus HOM05D004696 ORTHO05D005645 4.5e-56 221.9 197 60.4
Os02g0730500 Oryza sativa ssp. japonica HOM05D004696 ORTHO05D005645 5.9e-56 221.5 194 59.3
AUR62015697 Chenopodium quinoa HOM05D004696 ORTHO05D005645 1.0e-55 220.7 158 67.1
Aqoxy3G02973 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 2.9e-55 219.2 197 60.4
Oeu037627.2 Olea europaea HOM05D004696 ORTHO05D005645 2.9e-55 219.2 289 45.7
AL6G41010 Arabidopsis lyrata HOM05D004696 ORTHO05D005645 1.2e-53 213.8 196 55.6
PSO063G5897 Papaver somniferum HOM05D004696 ORTHO05D005645 1.6e-53 213.4 197 57.4
PSO782G4648 Papaver somniferum HOM05D004696 ORTHO05D005645 1.6e-53 213.4 192 58.3
PSO832G1751 Papaver somniferum HOM05D004696 ORTHO05D005645 2.7e-53 212.6 200 57.5
PSO478G3068 Papaver somniferum HOM05D004696 ORTHO05D005645 4.7e-53 211.8 194 57.2
Hma1.2p1_2234F.1_g317690 Hydrangea macrophylla HOM05D004696 ORTHO05D000003 1.4e-52 210.3 260 48.1
AT5G30495 Arabidopsis thaliana HOM05D004696 ORTHO05D005645 1.8e-52 209.9 196 54.1
Nitab4.5_0008086g0030 Nicotiana tabacum HOM05D004696 ORTHO05D005645 1.8e-52 209.9 197 56.3
Lj6C700T16 Lonicera japonica HOM05D004696 ORTHO05D005645 1.5e-51 206.8 197 57.4
Carub.0002s0865 Capsella rubella HOM05D004696 ORTHO05D005645 1.3e-50 203.8 192 55.2
CARHR185500 Cardamine hirsuta HOM05D004696 ORTHO05D005645 2.2e-50 203.0 194 52.1
Sp2g19960 Schrenkiella parvula HOM05D004696 ORTHO05D005645 2.2e-50 203.0 197 52.8
BcaC04g23715 Brassica carinata HOM05D004696 ORTHO05D005645 1.8e-49 199.9 197 52.3
BcaB04g19639 Brassica carinata HOM05D004696 ORTHO05D005645 3.1e-49 199.1 194 52.6
AT1G54770 Arabidopsis thaliana HOM05D004696 ORTHO05D005645 1.6e-48 196.8 198 56.1
Rhsim04G0248200 Rhododendron simsii HOM05D004696 ORTHO05D005645 1.6e-48 196.8 200 54.0
ECA248G3148 Erigeron canadensis HOM05D004696 ORTHO05D005645 3.5e-48 195.7 191 56.0
Thhalv10005420m.g Eutrema salsugineum HOM05D004696 ORTHO05D005645 6.5e-47 191.4 198 53.5
SGA_v2.0_scaffold69G23291 Striga asiatica HOM05D004696 ORTHO05D005645 1.5e-46 190.3 197 55.8
Aa31LG2G12130 Aethionema arabicum HOM05D004696 ORTHO05D005645 1.9e-46 189.9 196 51.5
BolC9t53474H Brassica oleracea HOM05D004696 ORTHO05D005645 4.2e-46 188.7 197 50.3
C09p05450 Brassica napus HOM05D004696 ORTHO05D005645 5.5e-46 188.3 197 50.3
Peaxi162Scf00164g00414 Petunia axillaris HOM05D004696 ORTHO05D005645 7.2e-46 188.0 197 52.8
A09p05040 Brassica napus HOM05D004696 ORTHO05D005645 9.5e-46 187.6 197 50.3
BraA09t36143Z Brassica rapa HOM05D004696 ORTHO05D005645 9.5e-46 187.6 197 50.3
SHI04008 Sapria himalayana HOM05D004696 ORTHO05D005645 1.0e-44 184.1 162 59.9
Actinidia01063 Actinidia chinensis HOM05D004696 ORTHO05D005645 1.2e-43 180.6 196 53.6
Mapoly0084s0020 Marchantia polymorpha HOM05D004696 ORTHO05D005645 7.5e-43 177.9 180 50.6
Nitab4.5_0000745g0120 Nicotiana tabacum HOM05D004696 ORTHO05D005645 6.3e-42 174.9 197 49.7
SEGI_16783 Sequoiadendron giganteum HOM05D004696 ORTHO05D005645 6.3e-42 174.9 171 55.0
SMO139G0013 Selaginella moellendorffii HOM05D004696 ORTHO05D005645 1.1e-41 174.1 183 51.4
SEGI_41631 Sequoiadendron giganteum HOM05D004696 ORTHO05D005645 1.8e-41 173.3 190 51.1
Lj4g0014561 Lotus japonicus HOM05D004696 ORTHO05D005645 2.4e-41 172.9 99 84.8
MELO3C035238.2 Cucumis melo HOM05D004696 ORTHO05D005645 9.2e-41 171.0 167 56.3
Lj4g0016234 Lotus japonicus HOM05D004696 ORTHO05D005645 1.2e-40 170.6 117 74.4
Pp3c7_450 Physcomitrium patens HOM05D004696 ORTHO05D005645 2.3e-39 166.4 179 50.8
Nn3g16891 Nelumbo nucifera HOM05D004696 ORTHO05D005645 3.3e-38 162.5 128 60.2
ECA149G0001 Erigeron canadensis HOM05D004696 ORTHO05D005645 2.1e-37 159.8 194 50.0
CBR_g41139 Chara braunii HOM05D004696 ORTHO05D005645 2.3e-31 139.8 138 44.9
Lj2g0010517 Lotus japonicus HOM05D004696 ORTHO05D005645 3.0e-31 139.4 134 60.4
ATR1127G170 Amborella trichopoda HOM05D004696 ORTHO05D005645 6.8e-28 128.3 128 54.7
HPP92_006011 Vanilla planifolia HOM05D004696 ORTHO05D005645 1.2e-27 127.5 124 52.4
Lj2g0009432 Lotus japonicus HOM05D004696 ORTHO05D005645 2.2e-26 123.2 97 69.1
Zm00001eb253530 Zea mays HOM05D004696 ORTHO05D005645 2.9e-26 122.9 99 63.6
AagrBONN_evm.TU.Sc2ySwM_368.1627 Anthoceros agrestis HOM05D004696 ORTHO05D005645 3.7e-26 122.5 121 50.4
MCO05G434 Micromonas commoda HOM05D004696 ORTHO05D005645 3.7e-26 122.5 155 44.5
RcHm_v2.0_Chr4g0427481 Rosa chinensis HOM05D004696 ORTHO05D005645 1.2e-24 117.5 104 59.6
CSS0022818 Camellia sinensis var. sinensis HOM05D004696 ORTHO05D005645 2.0e-24 116.7 100 58.0
CSS0046364 Camellia sinensis var. sinensis HOM05D004696 ORTHO05D005645 3.5e-24 115.9 101 57.4
COL.COLO4_34519 Corchorus olitorius HOM05D004696 ORTHO05D005645 1.3e-23 114.0 120 55.0
TAR371G0358 Trochodendron aralioides HOM05D004696 ORTHO05D005645 1.9e-22 110.2 102 61.8
PRCOL_00000839 Prasinoderma coloniale HOM05D004696 ORTHO05D005645 1.4e-20 104.0 142 40.1
Cfa024688 Carpinus fangiana HOM05D004696 ORTHO05D005645 7.5e-19 98.2 113 44.2
BcaC04g19932 Brassica carinata HOM05D004696 ORTHO05D005645 2.7e-16 89.7 118 43.2
BolC9t57816H Brassica oleracea HOM05D004696 ORTHO05D005645 2.7e-16 89.7 118 44.1
Cre03.g194150 Chlamydomonas reinhardtii HOM05D004696 ORTHO05D005645 3.5e-16 89.4 100 42.0
Aqoxy5G04095 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 7.3e-14 81.6 82 57.3
Zm00001eb026470 Zea mays HOM05D004696 ORTHO05D021106 2.8e-13 79.7 65 61.5
QL04p080373 Quercus lobata HOM05D000023 ORTHO05D000014 2.4e-12 76.6 45 80.0
BcaB05g22696 Brassica carinata HOM05D004696 ORTHO05D005645 4.4e-11 72.4 123 38.2
Zm00001eb219180 Zea mays HOM05D004696 ORTHO05D005645 4.4e-11 72.4 65 58.5
QL12p004065 Quercus lobata HOM05D004696 ORTHO05D005645 2.2e-10 70.1 66 62.1
EL10Ac1g01076 Beta vulgaris HOM05D004696 ORTHO05D005645 2.9e-10 69.7 57 63.2
Medtr7g074130 Medicago truncatula HOM05D004696 ORTHO05D005645 2.7e-08 63.2 62 53.2
QL04p074113 Quercus lobata HOM05D001335 ORTHO05D001184 1.5e-06 57.4 33 75.8
CSS0030909 Camellia sinensis var. sinensis HOM05D004696 ORTHO05D005645 3.3e-06 56.2 101 35.6


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